RNA–Protein interactions for RNA: ENST00000528462.5

PACSIN3-205, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 2

Gene PACSIN3, Length 1,560 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-205ENST00000528462 SNX27Q96L92 541 aa23.91■■□□□ 1.42
PACSIN3-205ENST00000528462 INPPL1O15357 1258 aa23.9■■□□□ 1.42
PACSIN3-205ENST00000528462 MEFVO15553 781 aaPredicted RBP23.9■■□□□ 1.42
PACSIN3-205ENST00000528462 FGBP02675 491 aa23.9■■□□□ 1.42
PACSIN3-205ENST00000528462 KRT13P13646 458 aa23.9■■□□□ 1.42
PACSIN3-205ENST00000528462 EPHB4P54760 987 aa23.9■■□□□ 1.42
PACSIN3-205ENST00000528462 PPP2R3AQ06190 1150 aa23.9■■□□□ 1.42
PACSIN3-205ENST00000528462 TMEM240Q5SV17 173 aa23.9■■□□□ 1.42
PACSIN3-205ENST00000528462 CNTN3Q9P232 1028 aa23.9■■□□□ 1.42
PACSIN3-205ENST00000528462 AKAP5P24588 427 aa23.89■■□□□ 1.41
PACSIN3-205ENST00000528462 VAMP7P51809 220 aa23.89■■□□□ 1.41
PACSIN3-205ENST00000528462 ZNF365Q70YC5 407 aa23.89■■□□□ 1.41
PACSIN3-205ENST00000528462 NPAS4Q8IUM7 802 aa23.89■■□□□ 1.41
PACSIN3-205ENST00000528462 LIMA1Q9UHB6 759 aaKnown RBP23.89■■□□□ 1.41
PACSIN3-205ENST00000528462 ATP1A3P13637 1013 aa23.88■■□□□ 1.41
PACSIN3-205ENST00000528462 HSP90AA4PQ58FG1 418 aa23.88■■□□□ 1.41
PACSIN3-205ENST00000528462 NT5DC4Q86YG4 428 aa23.88■■□□□ 1.41
PACSIN3-205ENST00000528462 ANKRD20A12PQ8NF67 263 aa23.88■■□□□ 1.41
PACSIN3-205ENST00000528462 PLEKHO2Q8TD55 490 aa23.88■■□□□ 1.41
PACSIN3-205ENST00000528462 SLC35C1Q96A29 364 aa23.88■■□□□ 1.41
PACSIN3-205ENST00000528462 RSAD1Q9HA92 442 aa23.88■■□□□ 1.41
PACSIN3-205ENST00000528462 PDE11AQ9HCR9 933 aa23.88■■□□□ 1.41
PACSIN3-205ENST00000528462 PCDH10Q9P2E7 1040 aa23.88■■□□□ 1.41
PACSIN3-205ENST00000528462 PARP2Q9UGN5 583 aa23.88■■□□□ 1.41
PACSIN3-205ENST00000528462 C2CD2Q9Y426 696 aa23.88■■□□□ 1.41
PACSIN3-205ENST00000528462 CITO14578 2027 aa23.87■■□□□ 1.41
PACSIN3-205ENST00000528462 MEIS3P2A8K0S8 358 aa23.87■■□□□ 1.41
PACSIN3-205ENST00000528462 KCNE1P15382 129 aa23.87■■□□□ 1.41
PACSIN3-205ENST00000528462 CDK11BP21127 795 aaKnown RBP23.87■■□□□ 1.41
PACSIN3-205ENST00000528462 WDR5P61964 334 aaKnown RBP23.87■■□□□ 1.41
PACSIN3-205ENST00000528462 HERVK_113Q902F9 699 aa23.87■■□□□ 1.41
PACSIN3-205ENST00000528462 FNBP1Q96RU3 617 aa23.87■■□□□ 1.41
PACSIN3-205ENST00000528462 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.87■■□□□ 1.412e-9■□□□□ 9.1
PACSIN3-205ENST00000528462 TUBGCP2Q9BSJ2 902 aa23.87■■□□□ 1.41
PACSIN3-205ENST00000528462 DERAQ9Y315 318 aa23.87■■□□□ 1.41
PACSIN3-205ENST00000528462 PCDHB7Q9Y5E2 793 aa23.87■■□□□ 1.41
PACSIN3-205ENST00000528462 PDE4DIPQ5VU43 2346 aa23.87■■□□□ 1.41
PACSIN3-205ENST00000528462 LACTBL1A8MY62 500 aa23.86■■□□□ 1.41
PACSIN3-205ENST00000528462 HOXA2O43364 376 aa23.86■■□□□ 1.41
PACSIN3-205ENST00000528462 PRKCSHP14314 528 aaPredicted RBP23.86■■□□□ 1.41
PACSIN3-205ENST00000528462 WNT7BP56706 349 aa23.86■■□□□ 1.41
PACSIN3-205ENST00000528462 KRT31Q15323 416 aa23.86■■□□□ 1.41
PACSIN3-205ENST00000528462 UVSSAQ2YD98 709 aa23.86■■□□□ 1.41
PACSIN3-205ENST00000528462 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.86■■□□□ 1.41
PACSIN3-205ENST00000528462 OTOP2Q7RTS6 562 aa23.86■■□□□ 1.41
PACSIN3-205ENST00000528462 APTXQ7Z2E3 356 aaKnown RBP23.86■■□□□ 1.41
PACSIN3-205ENST00000528462 WDR49Q8IV35 697 aa23.86■■□□□ 1.41
PACSIN3-205ENST00000528462 LPPQ93052 612 aa23.86■■□□□ 1.41
PACSIN3-205ENST00000528462 TOP1MTQ969P6 601 aa23.86■■□□□ 1.41
PACSIN3-205ENST00000528462 CCDC127Q96BQ5 260 aa23.86■■□□□ 1.41
PACSIN3-205ENST00000528462 APOL6Q9BWW8 343 aa23.86■■□□□ 1.41
PACSIN3-205ENST00000528462 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.86■■□□□ 1.41
PACSIN3-205ENST00000528462 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.86■■□□□ 1.41
PACSIN3-205ENST00000528462 AMHP03971 560 aa23.86■■□□□ 1.41
PACSIN3-205ENST00000528462 GTF2H1P32780 548 aa23.86■■□□□ 1.41
PACSIN3-205ENST00000528462 MAGEA10P43363 369 aaPredicted RBP23.86■■□□□ 1.41
PACSIN3-205ENST00000528462 MTIF2P46199 727 aaKnown RBP23.86■■□□□ 1.41
PACSIN3-205ENST00000528462 AP3M2P53677 418 aa23.86■■□□□ 1.41
PACSIN3-205ENST00000528462 MAN2A1Q16706 1144 aa23.86■■□□□ 1.41
PACSIN3-205ENST00000528462 C1orf220Q5T0J3 134 aa23.86■■□□□ 1.41
PACSIN3-205ENST00000528462 GSTCDQ8NEC7 633 aa23.86■■□□□ 1.41
PACSIN3-205ENST00000528462 FSD2A1L4K1 749 aa23.85■■□□□ 1.41
PACSIN3-205ENST00000528462 ARL5CA6NH57 179 aa23.85■■□□□ 1.41
PACSIN3-205ENST00000528462 LRRIQ3A6PVS8 624 aaPredicted RBP23.85■■□□□ 1.41
PACSIN3-205ENST00000528462 STX10O60499 249 aa23.85■■□□□ 1.41
PACSIN3-205ENST00000528462 OFD1O75665 1012 aa23.85■■□□□ 1.41
PACSIN3-205ENST00000528462 MLH1P40692 756 aa23.85■■□□□ 1.41
PACSIN3-205ENST00000528462 DLG4P78352 724 aa23.85■■□□□ 1.41
PACSIN3-205ENST00000528462 ZBTB6Q15916 424 aa23.85■■□□□ 1.41
PACSIN3-205ENST00000528462 GLB1LQ6UWU2 654 aa23.85■■□□□ 1.41
PACSIN3-205ENST00000528462 RNF169Q8NCN4 708 aa23.85■■□□□ 1.41
PACSIN3-205ENST00000528462 GAD1Q99259 594 aa23.85■■□□□ 1.41
PACSIN3-205ENST00000528462 CGRRF1Q99675 332 aa23.85■■□□□ 1.41
PACSIN3-205ENST00000528462 RNF19AQ9NV58 838 aa23.85■■□□□ 1.41
PACSIN3-205ENST00000528462 RALGAPA2Q2PPJ7 1873 aa23.84■■□□□ 1.41
PACSIN3-205ENST00000528462 PMM2O15305 246 aa23.84■■□□□ 1.41
PACSIN3-205ENST00000528462 DLATP10515 647 aaKnown RBP23.84■■□□□ 1.41
PACSIN3-205ENST00000528462 CLLU1OSQ5K130 101 aa23.84■■□□□ 1.41
PACSIN3-205ENST00000528462 RASIP1Q5U651 963 aa23.84■■□□□ 1.41
PACSIN3-205ENST00000528462 FAM212AQ96EL1 285 aa23.84■■□□□ 1.41
PACSIN3-205ENST00000528462 ZFP42Q96MM3 310 aa23.84■■□□□ 1.41
PACSIN3-205ENST00000528462 ZMAT2Q96NC0 199 aaKnown RBP23.84■■□□□ 1.41
PACSIN3-205ENST00000528462 MTIF3Q9H2K0 278 aaKnown RBP23.84■■□□□ 1.41
PACSIN3-205ENST00000528462 INTS13Q9NVM9 706 aa23.84■■□□□ 1.41
PACSIN3-205ENST00000528462 KLK14Q9P0G3 267 aa23.84■■□□□ 1.41
PACSIN3-205ENST00000528462 LRFN2Q9ULH4 789 aa23.84■■□□□ 1.41
PACSIN3-205ENST00000528462 RANBP2P49792 3224 aaKnown RBP23.83■■□□□ 1.41
PACSIN3-205ENST00000528462 SMIM28A0A1B0GU29 152 aa23.83■■□□□ 1.41
PACSIN3-205ENST00000528462 PTGESO14684 152 aa23.83■■□□□ 1.41
PACSIN3-205ENST00000528462 KCNJ6P48051 423 aa23.83■■□□□ 1.41
PACSIN3-205ENST00000528462 DUOXA2Q1HG44 320 aa23.83■■□□□ 1.41
PACSIN3-205ENST00000528462 DCAF17Q5H9S7 520 aaPredicted RBP23.83■■□□□ 1.41
PACSIN3-205ENST00000528462 MIIPQ5JXC2 388 aa23.83■■□□□ 1.41
PACSIN3-205ENST00000528462 CREBRFQ8IUR6 639 aa23.83■■□□□ 1.41
PACSIN3-205ENST00000528462 EFCAB13Q8IY85 973 aa23.83■■□□□ 1.41
PACSIN3-205ENST00000528462 PPP1R10Q96QC0 940 aaKnown RBP23.83■■□□□ 1.41
PACSIN3-205ENST00000528462 KANSL3Q9P2N6 904 aa23.83■■□□□ 1.41
PACSIN3-205ENST00000528462 ANK1P16157 1881 aa23.83■■□□□ 1.41
PACSIN3-205ENST00000528462 TNNI1P19237 187 aa23.82■■□□□ 1.4
PACSIN3-205ENST00000528462 DEFB103AP81534 67 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms