RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 PTPRHQ9HD43 1115 aa10.53□□□□□ -0.72
CHD7-208ENST00000528280 FNIP2Q9P278 1114 aa10.53□□□□□ -0.72
CHD7-208ENST00000528280 SRPRBQ9Y5M8 271 aaKnown RBP10.53□□□□□ -0.72
CHD7-208ENST00000528280 SF3B1O75533 1304 aaKnown RBP eCLIP10.53□□□□□ -0.72
CHD7-208ENST00000528280 CACNA1HO95180 2353 aa10.52□□□□□ -0.73
CHD7-208ENST00000528280 SLC16A4O15374 487 aa10.52□□□□□ -0.73
CHD7-208ENST00000528280 CLDN3O15551 220 aa10.52□□□□□ -0.73
CHD7-208ENST00000528280 STX6O43752 255 aa10.52□□□□□ -0.73
CHD7-208ENST00000528280 RECQL4O94761 1208 aa10.52□□□□□ -0.73
CHD7-208ENST00000528280 RPL9P32969 192 aaKnown RBP10.52□□□□□ -0.73
CHD7-208ENST00000528280 CLCN4P51793 760 aa10.52□□□□□ -0.73
CHD7-208ENST00000528280 MAPK7Q13164 816 aa10.52□□□□□ -0.73
CHD7-208ENST00000528280 ZNF568Q3ZCX4 644 aa10.52□□□□□ -0.73
CHD7-208ENST00000528280 FUT10Q6P4F1 479 aa10.52□□□□□ -0.73
CHD7-208ENST00000528280 MPZL3Q6UWV2 235 aa10.52□□□□□ -0.73
CHD7-208ENST00000528280 C15orf39Q6ZRI6 1047 aa10.52□□□□□ -0.73
CHD7-208ENST00000528280 RNF135Q8IUD6 432 aa10.52□□□□□ -0.73
CHD7-208ENST00000528280 HSCBQ8IWL3 235 aa10.52□□□□□ -0.73
CHD7-208ENST00000528280 MYCT1Q8N699 235 aa10.52□□□□□ -0.73
CHD7-208ENST00000528280 KRI1Q8N9T8 703 aaKnown RBP10.52□□□□□ -0.73
CHD7-208ENST00000528280 TMEM161BQ8NDZ6 487 aa10.52□□□□□ -0.73
CHD7-208ENST00000528280 AUTS2Q8WXX7 1259 aa10.52□□□□□ -0.73
CHD7-208ENST00000528280 RAD54LQ92698 747 aa10.52□□□□□ -0.73
CHD7-208ENST00000528280 RPGRIP1Q96KN7 1286 aa10.52□□□□□ -0.73
CHD7-208ENST00000528280 ZNF396Q96N95 335 aaPredicted RBP10.52□□□□□ -0.73
CHD7-208ENST00000528280 KIFC3Q9BVG8 833 aa10.52□□□□□ -0.73
CHD7-208ENST00000528280 VN1R3Q9BXE9 311 aa10.52□□□□□ -0.73
CHD7-208ENST00000528280 RHOBTB2Q9BYZ6 727 aa10.52□□□□□ -0.73
CHD7-208ENST00000528280 PLEKHA5Q9HAU0 1116 aa10.52□□□□□ -0.73
CHD7-208ENST00000528280 PARVGQ9HBI0 331 aa10.52□□□□□ -0.73
CHD7-208ENST00000528280 MARCH5Q9NX47 278 aa10.52□□□□□ -0.73
CHD7-208ENST00000528280 STK17AQ9UEE5 414 aa10.52□□□□□ -0.73
CHD7-208ENST00000528280 USTQ9Y2C2 406 aa10.52□□□□□ -0.73
CHD7-208ENST00000528280 GDAQ9Y2T3 454 aa10.52□□□□□ -0.73
CHD7-208ENST00000528280 RIF1Q5UIP0 2472 aaKnown RBP10.52□□□□□ -0.73
CHD7-208ENST00000528280 FAM186AA6NE01 2351 aa10.52□□□□□ -0.73
CHD7-208ENST00000528280 TTLL13PA6NNM8 815 aa10.51□□□□□ -0.73
CHD7-208ENST00000528280 TMEM189-UBE2V1I3L0A0 370 aa10.51□□□□□ -0.73
CHD7-208ENST00000528280 C2CD2LO14523 706 aa10.51□□□□□ -0.73
CHD7-208ENST00000528280 PTGESO14684 152 aa10.51□□□□□ -0.73
CHD7-208ENST00000528280 TRAK2O60296 914 aa10.51□□□□□ -0.73
CHD7-208ENST00000528280 B4GALT3O60512 393 aa10.51□□□□□ -0.73
CHD7-208ENST00000528280 FAM13AO94988 1023 aa10.51□□□□□ -0.73
CHD7-208ENST00000528280 GLUD1P00367 558 aa10.51□□□□□ -0.73
CHD7-208ENST00000528280 MAPTP10636 758 aaKnown RBP10.51□□□□□ -0.73
CHD7-208ENST00000528280 KCNE1P15382 129 aa10.51□□□□□ -0.73
CHD7-208ENST00000528280 PROZP22891 400 aa10.51□□□□□ -0.73
CHD7-208ENST00000528280 RBM10P98175 930 aaKnown RBP10.51□□□□□ -0.73
CHD7-208ENST00000528280 RESTQ13127 1097 aa10.51□□□□□ -0.73
CHD7-208ENST00000528280 SLC39A14Q15043 492 aa10.51□□□□□ -0.73
CHD7-208ENST00000528280 PTPAQ15257 358 aa10.51□□□□□ -0.73
CHD7-208ENST00000528280 ARSHQ5FYA8 562 aa10.51□□□□□ -0.73
CHD7-208ENST00000528280 XKR4Q5GH76 650 aa10.51□□□□□ -0.73
CHD7-208ENST00000528280 RRAGBQ5VZM2 374 aa10.51□□□□□ -0.73
CHD7-208ENST00000528280 EEF1DP3Q658K8 133 aa10.51□□□□□ -0.73
CHD7-208ENST00000528280 ALKAL1Q6UXT8 129 aa10.51□□□□□ -0.73
CHD7-208ENST00000528280 CCDC73Q6ZRK6 1079 aa10.51□□□□□ -0.73
CHD7-208ENST00000528280 SV2BQ7L1I2 683 aa10.51□□□□□ -0.73
CHD7-208ENST00000528280 RTL10Q7L3V2 364 aa10.51□□□□□ -0.73
CHD7-208ENST00000528280 TAS1R1Q7RTX1 841 aa10.51□□□□□ -0.73
CHD7-208ENST00000528280 HAUS6Q7Z4H7 955 aa10.51□□□□□ -0.73
CHD7-208ENST00000528280 GPR149Q86SP6 731 aa10.51□□□□□ -0.73
CHD7-208ENST00000528280 GPBP1Q86WP2 473 aa10.51□□□□□ -0.73
CHD7-208ENST00000528280 CMASQ8NFW8 434 aaPredicted RBP10.51□□□□□ -0.73
CHD7-208ENST00000528280 LARP4BQ92615 738 aaKnown RBP10.51□□□□□ -0.73
CHD7-208ENST00000528280 EDAQ92838 391 aa10.51□□□□□ -0.73
CHD7-208ENST00000528280 ACSF2Q96CM8 615 aaPredicted RBP10.51□□□□□ -0.73
CHD7-208ENST00000528280 TTPALQ9BTX7 342 aa10.51□□□□□ -0.73
CHD7-208ENST00000528280 TARS2Q9BW92 718 aaKnown RBP10.51□□□□□ -0.73
CHD7-208ENST00000528280 GPR62Q9BZJ7 368 aa10.51□□□□□ -0.73
CHD7-208ENST00000528280 LRRC27Q9C0I9 530 aa10.51□□□□□ -0.73
CHD7-208ENST00000528280 MTMR6Q9Y217 621 aa10.51□□□□□ -0.73
CHD7-208ENST00000528280 CLIC4Q9Y696 253 aa10.51□□□□□ -0.73
CHD7-208ENST00000528280 ATG2AQ2TAZ0 1938 aa10.5□□□□□ -0.73
CHD7-208ENST00000528280 KMT2BQ9UMN6 2715 aaPredicted RBP10.5□□□□□ -0.73
CHD7-208ENST00000528280 SMIM28A0A1B0GU29 152 aa10.5□□□□□ -0.73
CHD7-208ENST00000528280 TEX28O15482 410 aa10.5□□□□□ -0.73
CHD7-208ENST00000528280 TBCAO75347 108 aaKnown RBP10.5□□□□□ -0.73
CHD7-208ENST00000528280 B3GAT3O94766 335 aa10.5□□□□□ -0.73
CHD7-208ENST00000528280 CLTAP09496 248 aa10.5□□□□□ -0.73
CHD7-208ENST00000528280 EPCAMP16422 314 aa10.5□□□□□ -0.73
CHD7-208ENST00000528280 PLCG1P19174 1290 aa10.5□□□□□ -0.73
CHD7-208ENST00000528280 PAX3P23760 479 aa10.5□□□□□ -0.73
CHD7-208ENST00000528280 MATR3P43243 847 aaKnown RBP eCLIP10.5□□□□□ -0.73
CHD7-208ENST00000528280 ZNF131P52739 623 aa10.5□□□□□ -0.73
CHD7-208ENST00000528280 NCKAP1LP55160 1127 aa10.5□□□□□ -0.73
CHD7-208ENST00000528280 RAD51AP2Q09MP3 1159 aa10.5□□□□□ -0.73
CHD7-208ENST00000528280 DHX8Q14562 1220 aaKnown RBP10.5□□□□□ -0.73
CHD7-208ENST00000528280 MCM6Q14566 821 aa10.5□□□□□ -0.73
CHD7-208ENST00000528280 RARS2Q5T160 578 aaKnown RBP10.5□□□□□ -0.73
CHD7-208ENST00000528280 FAM171A1Q5VUB5 890 aa10.5□□□□□ -0.73
CHD7-208ENST00000528280 ATL3Q6DD88 541 aa10.5□□□□□ -0.73
CHD7-208ENST00000528280 SLFN12LQ6IEE8 588 aa10.5□□□□□ -0.73
CHD7-208ENST00000528280 ZBTB33Q86T24 672 aa10.5□□□□□ -0.73
CHD7-208ENST00000528280 RIN2Q8WYP3 895 aaPredicted RBP10.5□□□□□ -0.73
CHD7-208ENST00000528280 STAMQ92783 540 aa10.5□□□□□ -0.73
CHD7-208ENST00000528280 BICD1Q96G01 975 aa10.5□□□□□ -0.73
CHD7-208ENST00000528280 PPP1R10Q96QC0 940 aaKnown RBP10.5□□□□□ -0.73
CHD7-208ENST00000528280 CDT1Q9H211 546 aa10.5□□□□□ -0.73
CHD7-208ENST00000528280 SEL1LQ9UBV2 794 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms