RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 HAUS6Q7Z4H7 955 aa36.2■■■■□ 3.39
SSSCA1-205ENST00000527920 KRI1Q8N9T8 703 aaKnown RBP36.2■■■■□ 3.39
SSSCA1-205ENST00000527920 CLIC6Q96NY7 704 aa36.2■■■■□ 3.39
SSSCA1-205ENST00000527920 NECTIN4Q96NY8 510 aa36.2■■■■□ 3.39
SSSCA1-205ENST00000527920 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP36.2■■■■□ 3.39
SSSCA1-205ENST00000527920 KRT18P05783 430 aaKnown RBP36.19■■■■□ 3.38
SSSCA1-205ENST00000527920 ADH1AP07327 375 aa36.19■■■■□ 3.38
SSSCA1-205ENST00000527920 HSP90AA1P07900 732 aaKnown RBP36.19■■■■□ 3.38
SSSCA1-205ENST00000527920 UROC1Q96N76 676 aa36.19■■■■□ 3.38
SSSCA1-205ENST00000527920 MYH11P35749 1972 aa36.18■■■■□ 3.38
SSSCA1-205ENST00000527920 TMEM189-UBE2V1I3L0A0 370 aa36.18■■■■□ 3.38
SSSCA1-205ENST00000527920 C2CD2LO14523 706 aa36.18■■■■□ 3.38
SSSCA1-205ENST00000527920 KIF4AO95239 1232 aa36.18■■■■□ 3.38
SSSCA1-205ENST00000527920 CREMQ03060 361 aa36.18■■■■□ 3.38
SSSCA1-205ENST00000527920 MCL1Q07820 350 aa36.18■■■■□ 3.38
SSSCA1-205ENST00000527920 ELAVL2Q12926 359 aaKnown RBP36.18■■■■□ 3.38
SSSCA1-205ENST00000527920 NOLC1Q14978 699 aaKnown RBP eCLIP36.18■■■■□ 3.38
SSSCA1-205ENST00000527920 ZBTB33Q86T24 672 aa36.18■■■■□ 3.38
SSSCA1-205ENST00000527920 MYCT1Q8N699 235 aa36.18■■■■□ 3.38
SSSCA1-205ENST00000527920 FBXL18Q96ME1 805 aa36.18■■■■□ 3.38
SSSCA1-205ENST00000527920 ACAP3Q96P50 834 aa36.18■■■■□ 3.38
SSSCA1-205ENST00000527920 CACNG4Q9UBN1 327 aa36.18■■■■□ 3.38
SSSCA1-205ENST00000527920 SMIM28A0A1B0GU29 152 aa36.17■■■■□ 3.38
SSSCA1-205ENST00000527920 TEX28O15482 410 aa36.17■■■■□ 3.38
SSSCA1-205ENST00000527920 TBCAO75347 108 aaKnown RBP36.17■■■■□ 3.38
SSSCA1-205ENST00000527920 LINC00301Q8NCQ3 95 aa36.17■■■■□ 3.38
SSSCA1-205ENST00000527920 RABGGTAQ92696 567 aa36.17■■■■□ 3.38
SSSCA1-205ENST00000527920 SNX27Q96L92 541 aa36.17■■■■□ 3.38
SSSCA1-205ENST00000527920 ZNF396Q96N95 335 aaPredicted RBP36.17■■■■□ 3.38
SSSCA1-205ENST00000527920 SFXN1Q9H9B4 322 aa36.17■■■■□ 3.38
SSSCA1-205ENST00000527920 FNIP2Q9P278 1114 aa36.17■■■■□ 3.38
SSSCA1-205ENST00000527920 CLDN3O15551 220 aa36.16■■■■□ 3.38
SSSCA1-205ENST00000527920 DCXO43602 365 aa36.16■■■■□ 3.38
SSSCA1-205ENST00000527920 TRAK2O60296 914 aa36.16■■■■□ 3.38
SSSCA1-205ENST00000527920 MTHFRP42898 656 aa36.16■■■■□ 3.38
SSSCA1-205ENST00000527920 RRAGBQ5VZM2 374 aa36.16■■■■□ 3.38
SSSCA1-205ENST00000527920 ZBTB45Q96K62 511 aaPredicted RBP36.16■■■■□ 3.38
SSSCA1-205ENST00000527920 RIPOR3Q96MK2 946 aa36.16■■■■□ 3.38
SSSCA1-205ENST00000527920 APOL5Q9BWW9 433 aa36.16■■■■□ 3.38
SSSCA1-205ENST00000527920 SLC38A7Q9NVC3 462 aa36.16■■■■□ 3.38
SSSCA1-205ENST00000527920 CNTN3Q9P232 1028 aa36.16■■■■□ 3.38
SSSCA1-205ENST00000527920 ANKFY1Q9P2R3 1169 aa36.16■■■■□ 3.38
SSSCA1-205ENST00000527920 DPP7Q9UHL4 492 aa36.16■■■■□ 3.38
SSSCA1-205ENST00000527920 PIGRP01833 764 aa36.15■■■■□ 3.38
SSSCA1-205ENST00000527920 KCNE1P15382 129 aa36.15■■■■□ 3.38
SSSCA1-205ENST00000527920 GLRA4Q5JXX5 417 aa36.15■■■■□ 3.38
SSSCA1-205ENST00000527920 CCDC73Q6ZRK6 1079 aa36.15■■■■□ 3.38
SSSCA1-205ENST00000527920 FIZ1Q96SL8 496 aa36.15■■■■□ 3.38
SSSCA1-205ENST00000527920 TBX20Q9UMR3 447 aa36.15■■■■□ 3.38
SSSCA1-205ENST00000527920 K7ENM7 598 aa36.14■■■■□ 3.38
SSSCA1-205ENST00000527920 OSTNP61366 133 aa36.14■■■■□ 3.38
SSSCA1-205ENST00000527920 STK38Q15208 465 aa36.14■■■■□ 3.38
SSSCA1-205ENST00000527920 ELMSAN1Q6PJG2 1045 aa36.14■■■■□ 3.38
SSSCA1-205ENST00000527920 DCLRE1AQ6PJP8 1040 aa36.14■■■■□ 3.38
SSSCA1-205ENST00000527920 RNF135Q8IUD6 432 aa36.14■■■■□ 3.38
SSSCA1-205ENST00000527920 ST6GALNAC4Q9H4F1 302 aa36.14■■■■□ 3.38
SSSCA1-205ENST00000527920 GPR37L1O60883 481 aa36.13■■■■□ 3.37
SSSCA1-205ENST00000527920 PPP6R2O75170 966 aa36.13■■■■□ 3.37
SSSCA1-205ENST00000527920 YEATS4O95619 227 aa36.13■■■■□ 3.37
SSSCA1-205ENST00000527920 HERC4Q5GLZ8 1057 aaPredicted RBP36.13■■■■□ 3.37
SSSCA1-205ENST00000527920 RARS2Q5T160 578 aaKnown RBP36.13■■■■□ 3.37
SSSCA1-205ENST00000527920 RIN2Q8WYP3 895 aaPredicted RBP36.13■■■■□ 3.37
SSSCA1-205ENST00000527920 DDX27Q96GQ7 796 aaKnown RBP36.13■■■■□ 3.37
SSSCA1-205ENST00000527920 B3GALT6Q96L58 329 aa36.13■■■■□ 3.37
SSSCA1-205ENST00000527920 TTPALQ9BTX7 342 aa36.13■■■■□ 3.37
SSSCA1-205ENST00000527920 GLUD1P00367 558 aa36.12■■■■□ 3.37
SSSCA1-205ENST00000527920 ZSCAN22P10073 491 aaPredicted RBP36.12■■■■□ 3.37
SSSCA1-205ENST00000527920 GTF2BQ00403 316 aa36.12■■■■□ 3.37
SSSCA1-205ENST00000527920 KYAT1Q16773 422 aa36.12■■■■□ 3.37
SSSCA1-205ENST00000527920 UPP1Q16831 310 aa36.12■■■■□ 3.37
SSSCA1-205ENST00000527920 C12orf76Q8N812 135 aaPredicted RBP36.12■■■■□ 3.37
SSSCA1-205ENST00000527920 HASPINQ8TF76 798 aa36.12■■■■□ 3.37
SSSCA1-205ENST00000527920 HDAC7Q8WUI4 952 aa36.12■■■■□ 3.37
SSSCA1-205ENST00000527920 PIK3R5Q8WYR1 880 aa36.12■■■■□ 3.37
SSSCA1-205ENST00000527920 BICD1Q96G01 975 aa36.12■■■■□ 3.37
SSSCA1-205ENST00000527920 HNRNPDLO14979 420 aaKnown RBP36.11■■■■□ 3.37
SSSCA1-205ENST00000527920 SPTLC2O15270 562 aa36.11■■■■□ 3.37
SSSCA1-205ENST00000527920 TMEM31Q5JXX7 168 aa36.11■■■■□ 3.37
SSSCA1-205ENST00000527920 RTP2Q5QGT7 225 aa36.11■■■■□ 3.37
SSSCA1-205ENST00000527920 ATAT1Q5SQI0 421 aa36.11■■■■□ 3.37
SSSCA1-205ENST00000527920 PDXDC1Q6P996 788 aa36.11■■■■□ 3.37
SSSCA1-205ENST00000527920 SV2BQ7L1I2 683 aa36.11■■■■□ 3.37
SSSCA1-205ENST00000527920 CMASQ8NFW8 434 aaPredicted RBP36.11■■■■□ 3.37
SSSCA1-205ENST00000527920 RPGRIP1Q96KN7 1286 aa36.11■■■■□ 3.37
SSSCA1-205ENST00000527920 RHOBTB2Q9BYZ6 727 aa36.11■■■■□ 3.37
SSSCA1-205ENST00000527920 ZHX3Q9H4I2 956 aa36.11■■■■□ 3.37
SSSCA1-205ENST00000527920 PLEKHA5Q9HAU0 1116 aa36.11■■■■□ 3.37
SSSCA1-205ENST00000527920 SEL1LQ9UBV2 794 aa36.11■■■■□ 3.37
SSSCA1-205ENST00000527920 B3GAT3O94766 335 aa36.1■■■■□ 3.37
SSSCA1-205ENST00000527920 HARSP12081 509 aaKnown RBP36.1■■■■□ 3.37
SSSCA1-205ENST00000527920 LIG4P49917 911 aa36.1■■■■□ 3.37
SSSCA1-205ENST00000527920 FAM171A1Q5VUB5 890 aa36.1■■■■□ 3.37
SSSCA1-205ENST00000527920 PDZRN4Q6ZMN7 1036 aaPredicted RBP36.1■■■■□ 3.37
SSSCA1-205ENST00000527920 C15orf39Q6ZRI6 1047 aa36.1■■■■□ 3.37
SSSCA1-205ENST00000527920 MAP4K3Q8IVH8 894 aa36.1■■■■□ 3.37
SSSCA1-205ENST00000527920 ZMAT2Q96NC0 199 aaKnown RBP36.1■■■■□ 3.37
SSSCA1-205ENST00000527920 POMKQ9H5K3 350 aa36.1■■■■□ 3.37
SSSCA1-205ENST00000527920 NR2E1Q9Y466 385 aa36.1■■■■□ 3.37
SSSCA1-205ENST00000527920 GTF3C5Q9Y5Q8 519 aaPredicted RBP36.1■■■■□ 3.37
SSSCA1-205ENST00000527920 MEFVO15553 781 aaPredicted RBP36.09■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms