RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 TNFRSF25Q93038 417 aa16.04■□□□□ 0.16
USP47-207ENST00000527733 TINF2Q9BSI4 451 aa16.04■□□□□ 0.16
USP47-207ENST00000527733 PI4K2AQ9BTU6 479 aa16.04■□□□□ 0.16
USP47-207ENST00000527733 WNT8AQ9H1J5 351 aa16.04■□□□□ 0.16
USP47-207ENST00000527733 WDR35Q9P2L0 1181 aa16.04■□□□□ 0.16
USP47-207ENST00000527733 UVRAGQ9P2Y5 699 aa16.04■□□□□ 0.16
USP47-207ENST00000527733 TRAF3IP3Q9Y228 551 aa16.04■□□□□ 0.16
USP47-207ENST00000527733 A0A087WZ62 844 aa16.04■□□□□ 0.16
USP47-207ENST00000527733 SOX10P56693 466 aa16.04■□□□□ 0.16
USP47-207ENST00000527733 NAB2Q15742 525 aa16.04■□□□□ 0.16
USP47-207ENST00000527733 SEZ6Q53EL9 994 aa16.04■□□□□ 0.16
USP47-207ENST00000527733 CD302Q8IX05 232 aa16.04■□□□□ 0.16
USP47-207ENST00000527733 WNK4Q96J92 1243 aa16.04■□□□□ 0.16
USP47-207ENST00000527733 FDXACB1Q9BRP7 624 aaPredicted RBP16.04■□□□□ 0.16
USP47-207ENST00000527733 SETD4Q9NVD3 440 aa16.04■□□□□ 0.16
USP47-207ENST00000527733 PCSK1NQ9UHG2 260 aa16.04■□□□□ 0.16
USP47-207ENST00000527733 UBQLN1Q9UMX0 589 aaKnown RBP16.04■□□□□ 0.16
USP47-207ENST00000527733 PPP1R11O60927 126 aaPredicted RBP16.04■□□□□ 0.16
USP47-207ENST00000527733 SLC12A3P55017 1021 aa16.04■□□□□ 0.16
USP47-207ENST00000527733 BASP1P80723 227 aaKnown RBP16.04■□□□□ 0.16
USP47-207ENST00000527733 FIGNQ5HY92 759 aa16.04■□□□□ 0.16
USP47-207ENST00000527733 HPDLQ96IR7 371 aa16.04■□□□□ 0.16
USP47-207ENST00000527733 NT5C1AQ9BXI3 368 aa16.04■□□□□ 0.16
USP47-207ENST00000527733 HEMGNQ9BXL5 484 aa16.04■□□□□ 0.16
USP47-207ENST00000527733 PARD6BQ9BYG5 372 aa16.04■□□□□ 0.16
USP47-207ENST00000527733 ATRNL1Q5VV63 1379 aa16.03■□□□□ 0.16
USP47-207ENST00000527733 ARFGEF2Q9Y6D5 1785 aa16.03■□□□□ 0.16
USP47-207ENST00000527733 CPB1P15086 417 aa16.03■□□□□ 0.16
USP47-207ENST00000527733 GTF2H1P32780 548 aa16.03■□□□□ 0.16
USP47-207ENST00000527733 ADCYAP1R1P41586 468 aa16.03■□□□□ 0.16
USP47-207ENST00000527733 GLE1Q53GS7 698 aaKnown RBP16.03■□□□□ 0.16
USP47-207ENST00000527733 TREML2Q5T2D2 321 aa16.03■□□□□ 0.16
USP47-207ENST00000527733 NFRKBQ6P4R8 1299 aa16.03■□□□□ 0.16
USP47-207ENST00000527733 IL31RAQ8NI17 732 aa16.03■□□□□ 0.16
USP47-207ENST00000527733 LTBP3Q9NS15 1303 aa16.03■□□□□ 0.16
USP47-207ENST00000527733 SV2CQ496J9 727 aa16.03■□□□□ 0.16
USP47-207ENST00000527733 TLK2Q86UE8 772 aa16.03■□□□□ 0.16
USP47-207ENST00000527733 RNF25Q96BH1 459 aaPredicted RBP16.03■□□□□ 0.16
USP47-207ENST00000527733 PURBQ96QR8 312 aaKnown RBP16.03■□□□□ 0.16
USP47-207ENST00000527733 TMEM150BA6NC51 233 aa16.03■□□□□ 0.16
USP47-207ENST00000527733 SLC15A5A6NIM6 579 aa16.03■□□□□ 0.16
USP47-207ENST00000527733 PODXLO00592 558 aa16.03■□□□□ 0.16
USP47-207ENST00000527733 ZBTB39O15060 712 aa16.03■□□□□ 0.16
USP47-207ENST00000527733 GPR182O15218 404 aa16.03■□□□□ 0.16
USP47-207ENST00000527733 NCK2O43639 380 aa16.03■□□□□ 0.16
USP47-207ENST00000527733 WEE2P0C1S8 567 aa16.03■□□□□ 0.16
USP47-207ENST00000527733 SRGAP2BP0DMP2 458 aa16.03■□□□□ 0.16
USP47-207ENST00000527733 KRT3P12035 628 aa16.03■□□□□ 0.16
USP47-207ENST00000527733 PON1P27169 355 aa16.03■□□□□ 0.16
USP47-207ENST00000527733 SSTR3P32745 418 aaPredicted RBP16.03■□□□□ 0.16
USP47-207ENST00000527733 HSD17B4P51659 736 aa16.03■□□□□ 0.16
USP47-207ENST00000527733 GRIK4Q16099 956 aa16.03■□□□□ 0.16
USP47-207ENST00000527733 SLC30A5Q8TAD4 765 aa16.03■□□□□ 0.16
USP47-207ENST00000527733 NDUFAB1O14561 156 aa16.02■□□□□ 0.16
USP47-207ENST00000527733 SETDB1Q15047 1291 aa16.02■□□□□ 0.16
USP47-207ENST00000527733 C6orf163Q5TEZ5 329 aa16.02■□□□□ 0.16
USP47-207ENST00000527733 LBX2Q6XYB7 198 aa16.02■□□□□ 0.16
USP47-207ENST00000527733 CCDC60Q8IWA6 550 aaPredicted RBP16.02■□□□□ 0.16
USP47-207ENST00000527733 TRIM59Q8IWR1 403 aa16.02■□□□□ 0.16
USP47-207ENST00000527733 CDKL2Q92772 493 aa16.02■□□□□ 0.16
USP47-207ENST00000527733 MED4Q9NPJ6 270 aa16.02■□□□□ 0.16
USP47-207ENST00000527733 TADA2AO75478 443 aa16.02■□□□□ 0.16
USP47-207ENST00000527733 HOXC6P09630 235 aa16.02■□□□□ 0.16
USP47-207ENST00000527733 SKIP12755 728 aa16.02■□□□□ 0.16
USP47-207ENST00000527733 PMS1P54277 932 aaKnown RBP16.02■□□□□ 0.16
USP47-207ENST00000527733 SHCBP1Q8NEM2 672 aa16.02■□□□□ 0.16
USP47-207ENST00000527733 ETNPPLQ8TBG4 499 aa16.02■□□□□ 0.16
USP47-207ENST00000527733 ITGB3P05106 788 aa16.02■□□□□ 0.15
USP47-207ENST00000527733 PNPLA4P41247 253 aa16.02■□□□□ 0.15
USP47-207ENST00000527733 MXRA7P84157 204 aa16.02■□□□□ 0.15
USP47-207ENST00000527733 TRIP13Q15645 432 aaPredicted RBP16.02■□□□□ 0.15
USP47-207ENST00000527733 CCDC121Q6ZUS5 278 aa16.02■□□□□ 0.15
USP47-207ENST00000527733 ZNF677Q86XU0 584 aa16.02■□□□□ 0.15
USP47-207ENST00000527733 ATP8A1Q9Y2Q0 1164 aa16.02■□□□□ 0.15
USP47-207ENST00000527733 ZNF211Q13398 564 aaPredicted RBP16.02■□□□□ 0.15
USP47-207ENST00000527733 C1orf186Q6ZWK4 172 aa16.02■□□□□ 0.15
USP47-207ENST00000527733 MTG1Q9BT17 334 aaPredicted RBP16.02■□□□□ 0.15
USP47-207ENST00000527733 TRIM62Q9BVG3 475 aa16.02■□□□□ 0.15
USP47-207ENST00000527733 IRX2Q9BZI1 471 aaPredicted RBP16.02■□□□□ 0.15
USP47-207ENST00000527733 NFASCO94856 1347 aa16.01■□□□□ 0.15
USP47-207ENST00000527733 GOLGA8KD6RF30 607 aa16.01■□□□□ 0.15
USP47-207ENST00000527733 MDM2Q00987 491 aaPredicted RBP16.01■□□□□ 0.15
USP47-207ENST00000527733 SLC7A5Q01650 507 aa16.01■□□□□ 0.15
USP47-207ENST00000527733 DHX9Q08211 1270 aaKnown RBP16.01■□□□□ 0.15
USP47-207ENST00000527733 RWDD4Q6NW29 188 aaKnown RBP16.01■□□□□ 0.15
USP47-207ENST00000527733 GJB7Q6PEY0 223 aa16.01■□□□□ 0.15
USP47-207ENST00000527733 CPA5Q8WXQ8 436 aa16.01■□□□□ 0.15
USP47-207ENST00000527733 NHSL1Q5SYE7 1610 aa16.01■□□□□ 0.15
USP47-207ENST00000527733 SPEF2Q9C093 1822 aa16.01■□□□□ 0.15
USP47-207ENST00000527733 ZBTB24O43167 697 aaPredicted RBP16.01■□□□□ 0.15
USP47-207ENST00000527733 ATP8B1O43520 1251 aa16.01■□□□□ 0.15
USP47-207ENST00000527733 TRPA1O75762 1119 aa16.01■□□□□ 0.15
USP47-207ENST00000527733 PDGFRBP09619 1106 aa16.01■□□□□ 0.15
USP47-207ENST00000527733 CELF3Q5SZQ8 465 aaKnown RBP16.01■□□□□ 0.15
USP47-207ENST00000527733 DNAAF3Q8N9W5 541 aa16.01■□□□□ 0.15
USP47-207ENST00000527733 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.01■□□□□ 0.15
USP47-207ENST00000527733 WDR24Q96S15 920 aa16.01■□□□□ 0.15
USP47-207ENST00000527733 PACSIN2Q9UNF0 486 aaPredicted RBP16.01■□□□□ 0.15
USP47-207ENST00000527733 NID2Q14112 1375 aa16.01■□□□□ 0.15
USP47-207ENST00000527733 ZC3H11AO75152 810 aaKnown RBP eCLIP16.01■□□□□ 0.157e-6■■■■■ 33.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms