RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 GFRA3O60609 400 aa24.62■■□□□ 1.53
TRAPPC4-208ENST00000527680 EDN1P05305 212 aa24.62■■□□□ 1.53
TRAPPC4-208ENST00000527680 CFHP08603 1231 aa24.62■■□□□ 1.53
TRAPPC4-208ENST00000527680 LIN9Q5TKA1 542 aa24.62■■□□□ 1.53
TRAPPC4-208ENST00000527680 SLC44A3Q8N4M1 653 aa24.62■■□□□ 1.53
TRAPPC4-208ENST00000527680 LNX1Q8TBB1 728 aaPredicted RBP24.62■■□□□ 1.53
TRAPPC4-208ENST00000527680 PIK3R5Q8WYR1 880 aa24.62■■□□□ 1.53
TRAPPC4-208ENST00000527680 CLSTN3Q9BQT9 956 aa24.62■■□□□ 1.53
TRAPPC4-208ENST00000527680 EPS15L1Q9UBC2 864 aa24.62■■□□□ 1.53
TRAPPC4-208ENST00000527680 E9PMD0 336 aa24.61■■□□□ 1.53
TRAPPC4-208ENST00000527680 B3GAT3O94766 335 aa24.61■■□□□ 1.53
TRAPPC4-208ENST00000527680 U2AF2P26368 475 aaKnown RBP eCLIP24.61■■□□□ 1.53
TRAPPC4-208ENST00000527680 TOB1P50616 345 aaPredicted RBP24.61■■□□□ 1.53
TRAPPC4-208ENST00000527680 PEX3P56589 373 aa24.61■■□□□ 1.53
TRAPPC4-208ENST00000527680 GLRA4Q5JXX5 417 aa24.61■■□□□ 1.53
TRAPPC4-208ENST00000527680 PPM1LQ5SGD2 360 aa24.61■■□□□ 1.53
TRAPPC4-208ENST00000527680 MCTP1Q6DN14 999 aa24.61■■□□□ 1.53
TRAPPC4-208ENST00000527680 PDXDC1Q6P996 788 aa24.61■■□□□ 1.53
TRAPPC4-208ENST00000527680 NXPE3Q969Y0 559 aa24.61■■□□□ 1.53
TRAPPC4-208ENST00000527680 DAXXQ9UER7 740 aaPredicted RBP24.61■■□□□ 1.53
TRAPPC4-208ENST00000527680 POLIQ9UNA4 740 aa24.61■■□□□ 1.53
TRAPPC4-208ENST00000527680 CACNA1HO95180 2353 aa24.61■■□□□ 1.53
TRAPPC4-208ENST00000527680 PI15O43692 258 aa24.6■■□□□ 1.53
TRAPPC4-208ENST00000527680 ST18O60284 1047 aa24.6■■□□□ 1.53
TRAPPC4-208ENST00000527680 LAMP2P13473 410 aa24.6■■□□□ 1.53
TRAPPC4-208ENST00000527680 YARSP54577 528 aaKnown RBP24.6■■□□□ 1.53
TRAPPC4-208ENST00000527680 ZRSR1Q15695 479 aaKnown RBP24.6■■□□□ 1.53
TRAPPC4-208ENST00000527680 DCLRE1AQ6PJP8 1040 aa24.6■■□□□ 1.53
TRAPPC4-208ENST00000527680 DTHD1Q6ZMT9 781 aa24.6■■□□□ 1.53
TRAPPC4-208ENST00000527680 IGSF22Q8N9C0 903 aa24.6■■□□□ 1.53
TRAPPC4-208ENST00000527680 TCHPQ9BT92 498 aa24.6■■□□□ 1.53
TRAPPC4-208ENST00000527680 WNT16Q9UBV4 365 aa24.6■■□□□ 1.53
TRAPPC4-208ENST00000527680 NPR3P17342 541 aa24.59■■□□□ 1.53
TRAPPC4-208ENST00000527680 AOC1P19801 751 aa24.59■■□□□ 1.53
TRAPPC4-208ENST00000527680 FSHRP23945 695 aa24.59■■□□□ 1.53
TRAPPC4-208ENST00000527680 CDC25AP30304 524 aa24.59■■□□□ 1.53
TRAPPC4-208ENST00000527680 OSTNP61366 133 aa24.59■■□□□ 1.53
TRAPPC4-208ENST00000527680 NAB2Q15742 525 aa24.59■■□□□ 1.53
TRAPPC4-208ENST00000527680 GRASPQ7Z6J2 395 aaPredicted RBP24.59■■□□□ 1.53
TRAPPC4-208ENST00000527680 KIF2CQ99661 725 aa24.59■■□□□ 1.53
TRAPPC4-208ENST00000527680 RTP3Q9BQQ7 232 aa24.59■■□□□ 1.53
TRAPPC4-208ENST00000527680 CCDC94Q9BW85 323 aaPredicted RBP24.59■■□□□ 1.53
TRAPPC4-208ENST00000527680 FBXW11Q9UKB1 542 aa24.59■■□□□ 1.53
TRAPPC4-208ENST00000527680 TNFSF13BQ9Y275 285 aa24.59■■□□□ 1.53
TRAPPC4-208ENST00000527680 KIF3AQ9Y496 699 aa24.59■■□□□ 1.53
TRAPPC4-208ENST00000527680 TRIP11Q15643 1979 aa24.58■■□□□ 1.53
TRAPPC4-208ENST00000527680 PP2D1A8MPX8 630 aa24.58■■□□□ 1.53
TRAPPC4-208ENST00000527680 LAD1O00515 517 aa24.58■■□□□ 1.53
TRAPPC4-208ENST00000527680 TRAPPC3O43617 180 aa24.58■■□□□ 1.53
TRAPPC4-208ENST00000527680 HIP1RO75146 1068 aa24.58■■□□□ 1.53
TRAPPC4-208ENST00000527680 C8AP07357 584 aa24.58■■□□□ 1.53
TRAPPC4-208ENST00000527680 OR1D2P34982 312 aa24.58■■□□□ 1.53
TRAPPC4-208ENST00000527680 NPTX2P47972 431 aa24.58■■□□□ 1.53
TRAPPC4-208ENST00000527680 CLCNKBP51801 687 aa24.58■■□□□ 1.53
TRAPPC4-208ENST00000527680 DMP1Q13316 513 aaPredicted RBP24.58■■□□□ 1.53
TRAPPC4-208ENST00000527680 CWF19L1Q69YN2 538 aaKnown RBP24.58■■□□□ 1.53
TRAPPC4-208ENST00000527680 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.58■■□□□ 1.53
TRAPPC4-208ENST00000527680 ST13P5Q8NFI4 369 aaPredicted RBP24.58■■□□□ 1.53
TRAPPC4-208ENST00000527680 KMT5AQ9NQR1 393 aa24.58■■□□□ 1.53
TRAPPC4-208ENST00000527680 TOPORSQ9NS56 1045 aaPredicted RBP24.58■■□□□ 1.53
TRAPPC4-208ENST00000527680 CA14Q9ULX7 337 aa24.58■■□□□ 1.53
TRAPPC4-208ENST00000527680 DOCK6Q96HP0 2047 aa24.57■■□□□ 1.52
TRAPPC4-208ENST00000527680 CCL16O15467 120 aa24.57■■□□□ 1.52
TRAPPC4-208ENST00000527680 ADAM12O43184 909 aa24.57■■□□□ 1.52
TRAPPC4-208ENST00000527680 XYLBO75191 536 aa24.57■■□□□ 1.52
TRAPPC4-208ENST00000527680 PAPLNO95428 1278 aa24.57■■□□□ 1.52
TRAPPC4-208ENST00000527680 HNRNPA1P09651 372 aaKnown RBP eCLIP24.57■■□□□ 1.52
TRAPPC4-208ENST00000527680 SRFP11831 508 aa24.57■■□□□ 1.52
TRAPPC4-208ENST00000527680 ZNF568Q3ZCX4 644 aa24.57■■□□□ 1.52
TRAPPC4-208ENST00000527680 DRC1Q96MC2 740 aa24.57■■□□□ 1.52
TRAPPC4-208ENST00000527680 UROC1Q96N76 676 aa24.57■■□□□ 1.52
TRAPPC4-208ENST00000527680 PPP1R10Q96QC0 940 aaKnown RBP24.57■■□□□ 1.52
TRAPPC4-208ENST00000527680 ACO2Q99798 780 aaKnown RBP24.57■■□□□ 1.52
TRAPPC4-208ENST00000527680 MRPL4Q9BYD3 311 aaKnown RBP24.57■■□□□ 1.52
TRAPPC4-208ENST00000527680 TMEM134Q9H6X4 195 aa24.57■■□□□ 1.52
TRAPPC4-208ENST00000527680 RBM19Q9Y4C8 960 aaKnown RBP24.57■■□□□ 1.52
TRAPPC4-208ENST00000527680 DOCK8Q8NF50 2099 aa24.57■■□□□ 1.52
TRAPPC4-208ENST00000527680 SMIM28A0A1B0GU29 152 aa24.56■■□□□ 1.52
TRAPPC4-208ENST00000527680 SFI1A8K8P3 1242 aa24.56■■□□□ 1.52
TRAPPC4-208ENST00000527680 NTHL1P78549 312 aa24.56■■□□□ 1.52
TRAPPC4-208ENST00000527680 AXDND1Q5T1B0 1012 aaPredicted RBP24.56■■□□□ 1.52
TRAPPC4-208ENST00000527680 RINT1Q6NUQ1 792 aa24.56■■□□□ 1.52
TRAPPC4-208ENST00000527680 TARS2Q9BW92 718 aaKnown RBP24.56■■□□□ 1.52
TRAPPC4-208ENST00000527680 GOLGA2P5Q9HBQ8 144 aa24.56■■□□□ 1.52
TRAPPC4-208ENST00000527680 ZFP37Q9Y6Q3 630 aaPredicted RBP24.56■■□□□ 1.52
TRAPPC4-208ENST00000527680 FGFR3P22607 806 aa24.55■■□□□ 1.52
TRAPPC4-208ENST00000527680 IGFBP6P24592 240 aaPredicted RBP24.55■■□□□ 1.52
TRAPPC4-208ENST00000527680 PRPHP41219 470 aa24.55■■□□□ 1.52
TRAPPC4-208ENST00000527680 GRM5P41594 1212 aa24.55■■□□□ 1.52
TRAPPC4-208ENST00000527680 RAB33AQ14088 237 aa24.55■■□□□ 1.52
TRAPPC4-208ENST00000527680 IL17AQ16552 155 aa24.55■■□□□ 1.52
TRAPPC4-208ENST00000527680 UPP1Q16831 310 aa24.55■■□□□ 1.52
TRAPPC4-208ENST00000527680 CEP120Q8N960 986 aa24.55■■□□□ 1.52
TRAPPC4-208ENST00000527680 SLC7A14Q8TBB6 771 aa24.55■■□□□ 1.52
TRAPPC4-208ENST00000527680 RUSC1Q9BVN2 902 aa24.55■■□□□ 1.52
TRAPPC4-208ENST00000527680 CDT1Q9H211 546 aa24.55■■□□□ 1.52
TRAPPC4-208ENST00000527680 PHLPP2Q6ZVD8 1323 aa24.55■■□□□ 1.52
TRAPPC4-208ENST00000527680 ZFHX2Q9C0A1 2572 aaPredicted RBP24.54■■□□□ 1.52
TRAPPC4-208ENST00000527680 KRBA1A5PL33 1030 aa24.54■■□□□ 1.52
TRAPPC4-208ENST00000527680 TMEM189-UBE2V1I3L0A0 370 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms