RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 NUP188Q5SRE5 1749 aa7.97□□□□□ -1.13
SOX6-208ENST00000527619 PITPNM2Q9BZ72 1349 aa7.97□□□□□ -1.13
SOX6-208ENST00000527619 ENTPD5O75356 428 aa7.97□□□□□ -1.13
SOX6-208ENST00000527619 ADAMTS2O95450 1211 aa7.97□□□□□ -1.13
SOX6-208ENST00000527619 FGGP02679 453 aa7.97□□□□□ -1.13
SOX6-208ENST00000527619 S100BP04271 92 aaPredicted RBP7.97□□□□□ -1.13
SOX6-208ENST00000527619 RBP3P10745 1247 aa7.97□□□□□ -1.13
SOX6-208ENST00000527619 S100A1P23297 94 aa7.97□□□□□ -1.13
SOX6-208ENST00000527619 EPHB2P29323 1055 aa7.97□□□□□ -1.13
SOX6-208ENST00000527619 ATP5DP30049 168 aa7.97□□□□□ -1.13
SOX6-208ENST00000527619 PIK3CAP42336 1068 aa7.97□□□□□ -1.13
SOX6-208ENST00000527619 LRRC63Q05C16 580 aa7.97□□□□□ -1.13
SOX6-208ENST00000527619 LSAMPQ13449 338 aa7.97□□□□□ -1.13
SOX6-208ENST00000527619 DHX34Q14147 1143 aaKnown RBP7.97□□□□□ -1.13
SOX6-208ENST00000527619 SIM2Q14190 667 aaPredicted RBP7.97□□□□□ -1.13
SOX6-208ENST00000527619 ZNF362Q5T0B9 420 aaPredicted RBP7.97□□□□□ -1.13
SOX6-208ENST00000527619 SYCP2LQ5T4T6 812 aa7.97□□□□□ -1.13
SOX6-208ENST00000527619 SNX30Q5VWJ9 437 aa7.97□□□□□ -1.13
SOX6-208ENST00000527619 GRAMD4Q6IC98 578 aa7.97□□□□□ -1.13
SOX6-208ENST00000527619 VSTM1Q6UX27 236 aa7.97□□□□□ -1.13
SOX6-208ENST00000527619 KRT27Q7Z3Y8 459 aa7.97□□□□□ -1.13
SOX6-208ENST00000527619 OSTM1Q86WC4 334 aa7.97□□□□□ -1.13
SOX6-208ENST00000527619 VPS52Q8N1B4 723 aa7.97□□□□□ -1.13
SOX6-208ENST00000527619 LINC00469Q8N7U9 141 aa7.97□□□□□ -1.13
SOX6-208ENST00000527619 ANKRD42Q8N9B4 389 aa7.97□□□□□ -1.13
SOX6-208ENST00000527619 FAM133AQ8N9E0 248 aa7.97□□□□□ -1.13
SOX6-208ENST00000527619 STKLD1Q8NE28 680 aa7.97□□□□□ -1.13
SOX6-208ENST00000527619 FBXO25Q8TCJ0 367 aa7.97□□□□□ -1.13
SOX6-208ENST00000527619 ASIC4Q96FT7 647 aa7.97□□□□□ -1.13
SOX6-208ENST00000527619 MAGEB18Q96M61 343 aa7.97□□□□□ -1.13
SOX6-208ENST00000527619 HAPLN3Q96S86 360 aa7.97□□□□□ -1.13
SOX6-208ENST00000527619 CGREF1Q99674 301 aa7.97□□□□□ -1.13
SOX6-208ENST00000527619 KIAA1683Q9H0B3 1180 aa7.97□□□□□ -1.13
SOX6-208ENST00000527619 BHMT2Q9H2M3 363 aa7.97□□□□□ -1.13
SOX6-208ENST00000527619 ARMT1Q9H993 441 aa7.97□□□□□ -1.13
SOX6-208ENST00000527619 SPC25Q9HBM1 224 aa7.97□□□□□ -1.13
SOX6-208ENST00000527619 KMT5AQ9NQR1 393 aa7.97□□□□□ -1.13
SOX6-208ENST00000527619 USP40Q9NVE5 1235 aa7.97□□□□□ -1.13
SOX6-208ENST00000527619 GTF3C4Q9UKN8 822 aa7.97□□□□□ -1.13
SOX6-208ENST00000527619 CNTNAP5Q8WYK1 1306 aa7.97□□□□□ -1.13
SOX6-208ENST00000527619 RIC1Q4ADV7 1423 aa7.97□□□□□ -1.13
SOX6-208ENST00000527619 KIAA0391O15091 583 aaKnown RBP7.96□□□□□ -1.13
SOX6-208ENST00000527619 CALM1P0DP23 149 aa7.96□□□□□ -1.13
SOX6-208ENST00000527619 CALM2P0DP24 149 aa7.96□□□□□ -1.13
SOX6-208ENST00000527619 CALM3P0DP25 149 aa7.96□□□□□ -1.13
SOX6-208ENST00000527619 FGFR4P22455 802 aa7.96□□□□□ -1.13
SOX6-208ENST00000527619 YARSP54577 528 aaKnown RBP7.96□□□□□ -1.13
SOX6-208ENST00000527619 CYP4A11Q02928 519 aa7.96□□□□□ -1.13
SOX6-208ENST00000527619 CRY1Q16526 586 aa7.96□□□□□ -1.13
SOX6-208ENST00000527619 GPR162Q16538 588 aa7.96□□□□□ -1.13
SOX6-208ENST00000527619 P3H1Q32P28 736 aa7.96□□□□□ -1.13
SOX6-208ENST00000527619 UBAP2Q5T6F2 1119 aaKnown RBP7.96□□□□□ -1.13
SOX6-208ENST00000527619 TMTC3Q6ZXV5 915 aa7.96□□□□□ -1.13
SOX6-208ENST00000527619 LRRC43Q8N309 656 aa7.96□□□□□ -1.13
SOX6-208ENST00000527619 FLCNQ8NFG4 579 aa7.96□□□□□ -1.13
SOX6-208ENST00000527619 WDR60Q8WVS4 1066 aa7.96□□□□□ -1.13
SOX6-208ENST00000527619 ZFPM2Q8WW38 1151 aa7.96□□□□□ -1.13
SOX6-208ENST00000527619 ARHGEF2Q92974 986 aaKnown RBP7.96□□□□□ -1.13
SOX6-208ENST00000527619 SLC7A6OSQ96CW6 309 aaPredicted RBP7.96□□□□□ -1.13
SOX6-208ENST00000527619 HES6Q96HZ4 224 aa7.96□□□□□ -1.13
SOX6-208ENST00000527619 C8orf48Q96LL4 319 aa7.96□□□□□ -1.13
SOX6-208ENST00000527619 FAM161BQ96MY7 647 aa7.96□□□□□ -1.13
SOX6-208ENST00000527619 UROC1Q96N76 676 aa7.96□□□□□ -1.13
SOX6-208ENST00000527619 DNAI2Q9GZS0 605 aa7.96□□□□□ -1.13
SOX6-208ENST00000527619 ZHX3Q9H4I2 956 aa7.96□□□□□ -1.13
SOX6-208ENST00000527619 KCNK9Q9NPC2 374 aa7.96□□□□□ -1.13
SOX6-208ENST00000527619 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.96□□□□□ -1.13
SOX6-208ENST00000527619 PARP2Q9UGN5 583 aa7.96□□□□□ -1.13
SOX6-208ENST00000527619 SNX24Q9Y343 169 aa7.96□□□□□ -1.13
SOX6-208ENST00000527619 ATP8B3O60423 1300 aa7.96□□□□□ -1.13
SOX6-208ENST00000527619 SPDYE2BA6NHP3 402 aa7.96□□□□□ -1.14
SOX6-208ENST00000527619 TRAFD1O14545 582 aaPredicted RBP7.96□□□□□ -1.14
SOX6-208ENST00000527619 MAPK13O15264 365 aa7.96□□□□□ -1.14
SOX6-208ENST00000527619 SPDYE6P0CI01 402 aa7.96□□□□□ -1.14
SOX6-208ENST00000527619 MARK3P27448 753 aa7.96□□□□□ -1.14
SOX6-208ENST00000527619 STX2P32856 288 aa7.96□□□□□ -1.14
SOX6-208ENST00000527619 MARSP56192 900 aaKnown RBP7.96□□□□□ -1.14
SOX6-208ENST00000527619 MSLNQ13421 630 aaPredicted RBP7.96□□□□□ -1.14
SOX6-208ENST00000527619 SPDYE2Q495Y8 402 aa7.96□□□□□ -1.14
SOX6-208ENST00000527619 LRRC74BQ6ZQY2 392 aa7.96□□□□□ -1.14
SOX6-208ENST00000527619 LRRC55Q6ZSA7 311 aa7.96□□□□□ -1.14
SOX6-208ENST00000527619 PTF1AQ7RTS3 328 aa7.96□□□□□ -1.14
SOX6-208ENST00000527619 NT5DC3Q86UY8 548 aa7.96□□□□□ -1.14
SOX6-208ENST00000527619 JAMLQ86YT9 394 aa7.96□□□□□ -1.14
SOX6-208ENST00000527619 TTC5Q8N0Z6 440 aa7.96□□□□□ -1.14
SOX6-208ENST00000527619 PPFIBP2Q8ND30 876 aa7.96□□□□□ -1.14
SOX6-208ENST00000527619 TMC2Q8TDI7 906 aa7.96□□□□□ -1.14
SOX6-208ENST00000527619 ESR2Q92731 530 aa7.96□□□□□ -1.14
SOX6-208ENST00000527619 CLMNQ96JQ2 1002 aa7.96□□□□□ -1.14
SOX6-208ENST00000527619 LRRC37BQ96QE4 947 aa7.96□□□□□ -1.14
SOX6-208ENST00000527619 TSG101Q99816 390 aa7.96□□□□□ -1.14
SOX6-208ENST00000527619 CENPKQ9BS16 269 aa7.96□□□□□ -1.14
SOX6-208ENST00000527619 MIS12Q9H081 205 aa7.96□□□□□ -1.14
SOX6-208ENST00000527619 CLK4Q9HAZ1 481 aaKnown RBP7.96□□□□□ -1.14
SOX6-208ENST00000527619 PARVGQ9HBI0 331 aa7.96□□□□□ -1.14
SOX6-208ENST00000527619 MLXIPLQ9NP71 852 aa7.96□□□□□ -1.14
SOX6-208ENST00000527619 LNPEPQ9UIQ6 1025 aa7.96□□□□□ -1.14
SOX6-208ENST00000527619 FLT1P17948 1338 aa7.96□□□□□ -1.14
SOX6-208ENST00000527619 CAMTA1Q9Y6Y1 1673 aa7.96□□□□□ -1.14
SOX6-208ENST00000527619 A0A0A6YYK5 440 aaPredicted RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms