RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 MTHFD1LQ6UB35 978 aa17.47■□□□□ 0.39
SNRNP35-204ENST00000527158 H2AFVQ71UI9 128 aa17.47■□□□□ 0.39
SNRNP35-204ENST00000527158 ENOSF1Q7L5Y1 443 aa17.47■□□□□ 0.39
SNRNP35-204ENST00000527158 HELQQ8TDG4 1101 aa17.47■□□□□ 0.39
SNRNP35-204ENST00000527158 ZNF668Q96K58 619 aaPredicted RBP17.47■□□□□ 0.39
SNRNP35-204ENST00000527158 CGRRF1Q99675 332 aa17.47■□□□□ 0.39
SNRNP35-204ENST00000527158 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.47■□□□□ 0.39
SNRNP35-204ENST00000527158 HDAC6Q9UBN7 1215 aa17.47■□□□□ 0.39
SNRNP35-204ENST00000527158 NENFQ9UMX5 172 aa17.47■□□□□ 0.39
SNRNP35-204ENST00000527158 AKT3Q9Y243 479 aa17.47■□□□□ 0.39
SNRNP35-204ENST00000527158 OGTO15294 1046 aa17.47■□□□□ 0.39
SNRNP35-204ENST00000527158 C4BPAP04003 597 aaKnown RBP17.47■□□□□ 0.39
SNRNP35-204ENST00000527158 IFI16Q16666 785 aaKnown RBP17.47■□□□□ 0.39
SNRNP35-204ENST00000527158 ATF7IP2Q5U623 682 aa17.47■□□□□ 0.39
SNRNP35-204ENST00000527158 LMBRD2Q68DH5 695 aaPredicted RBP17.47■□□□□ 0.39
SNRNP35-204ENST00000527158 FAM71AQ8IYT1 594 aa17.47■□□□□ 0.39
SNRNP35-204ENST00000527158 LNX1Q8TBB1 728 aaPredicted RBP17.47■□□□□ 0.39
SNRNP35-204ENST00000527158 SOCS4Q8WXH5 440 aa17.47■□□□□ 0.39
SNRNP35-204ENST00000527158 KAT5Q92993 513 aa17.47■□□□□ 0.39
SNRNP35-204ENST00000527158 KREMEN1Q96MU8 473 aa17.47■□□□□ 0.39
SNRNP35-204ENST00000527158 AGPAT1Q99943 283 aa17.47■□□□□ 0.39
SNRNP35-204ENST00000527158 C1orf112Q9NSG2 853 aa17.47■□□□□ 0.39
SNRNP35-204ENST00000527158 SEPT11Q9NVA2 429 aaKnown RBP17.47■□□□□ 0.39
SNRNP35-204ENST00000527158 PRMT7Q9NVM4 692 aaPredicted RBP17.47■□□□□ 0.39
SNRNP35-204ENST00000527158 PSD3Q9NYI0 1048 aa17.47■□□□□ 0.39
SNRNP35-204ENST00000527158 PUF60Q9UHX1 559 aaKnown RBP17.47■□□□□ 0.39
SNRNP35-204ENST00000527158 ABT1Q9ULW3 272 aaKnown RBP17.47■□□□□ 0.39
SNRNP35-204ENST00000527158 CYP2B6P20813 491 aa17.46■□□□□ 0.39
SNRNP35-204ENST00000527158 OAS2P29728 719 aaKnown RBP17.46■□□□□ 0.39
SNRNP35-204ENST00000527158 AP3M2P53677 418 aa17.46■□□□□ 0.39
SNRNP35-204ENST00000527158 MBTD1Q05BQ5 628 aa17.46■□□□□ 0.39
SNRNP35-204ENST00000527158 MPZL3Q6UWV2 235 aa17.46■□□□□ 0.39
SNRNP35-204ENST00000527158 BRSK2Q8IWQ3 736 aa17.46■□□□□ 0.39
SNRNP35-204ENST00000527158 LINC01465Q8N7H1 131 aa17.46■□□□□ 0.39
SNRNP35-204ENST00000527158 SHC3Q92529 594 aa17.46■□□□□ 0.39
SNRNP35-204ENST00000527158 USP6NLQ92738 828 aa17.46■□□□□ 0.39
SNRNP35-204ENST00000527158 RPGRIP1Q96KN7 1286 aa17.46■□□□□ 0.39
SNRNP35-204ENST00000527158 SYT11Q9BT88 431 aa17.46■□□□□ 0.39
SNRNP35-204ENST00000527158 ACBD3Q9H3P7 528 aa17.46■□□□□ 0.39
SNRNP35-204ENST00000527158 ST7Q9NRC1 585 aa17.46■□□□□ 0.39
SNRNP35-204ENST00000527158 FLRT1Q9NZU1 646 aa17.46■□□□□ 0.39
SNRNP35-204ENST00000527158 CNTNAP2Q9UHC6 1331 aa17.46■□□□□ 0.39
SNRNP35-204ENST00000527158 FAM155AB1AL88 458 aaPredicted RBP17.46■□□□□ 0.39
SNRNP35-204ENST00000527158 TNPO2O14787 897 aaKnown RBP17.46■□□□□ 0.39
SNRNP35-204ENST00000527158 SASH3O75995 380 aa17.46■□□□□ 0.39
SNRNP35-204ENST00000527158 PIK3CAP42336 1068 aa17.46■□□□□ 0.39
SNRNP35-204ENST00000527158 GCNT1Q02742 428 aa17.46■□□□□ 0.39
SNRNP35-204ENST00000527158 GRM1Q13255 1194 aa17.46■□□□□ 0.39
SNRNP35-204ENST00000527158 GRIK4Q16099 956 aa17.46■□□□□ 0.39
SNRNP35-204ENST00000527158 SEZ6Q53EL9 994 aa17.46■□□□□ 0.39
SNRNP35-204ENST00000527158 TDRD10Q5VZ19 366 aaKnown RBP17.46■□□□□ 0.39
SNRNP35-204ENST00000527158 OLFML2BQ68BL8 750 aa17.46■□□□□ 0.39
SNRNP35-204ENST00000527158 GNEQ9Y223 722 aaKnown RBP17.46■□□□□ 0.39
SNRNP35-204ENST00000527158 A6NJR5 290 aa17.45■□□□□ 0.38
SNRNP35-204ENST00000527158 ADCY6O43306 1168 aa17.45■□□□□ 0.38
SNRNP35-204ENST00000527158 PHACTR2O75167 634 aa17.45■□□□□ 0.38
SNRNP35-204ENST00000527158 HLA-DRAP01903 254 aa17.45■□□□□ 0.38
SNRNP35-204ENST00000527158 WNT7BP56706 349 aa17.45■□□□□ 0.38
SNRNP35-204ENST00000527158 SURF1Q15526 300 aa17.45■□□□□ 0.38
SNRNP35-204ENST00000527158 TATDN2Q93075 761 aa17.45■□□□□ 0.38
SNRNP35-204ENST00000527158 PI4K2AQ9BTU6 479 aa17.45■□□□□ 0.38
SNRNP35-204ENST00000527158 ANKZF1Q9H8Y5 726 aa17.45■□□□□ 0.38
SNRNP35-204ENST00000527158 IFT122Q9HBG6 1241 aa17.45■□□□□ 0.38
SNRNP35-204ENST00000527158 TSKSQ9UJT2 592 aa17.45■□□□□ 0.38
SNRNP35-204ENST00000527158 A0A087WZ62 844 aa17.45■□□□□ 0.38
SNRNP35-204ENST00000527158 RRN3P2A6NIE6 340 aa17.45■□□□□ 0.38
SNRNP35-204ENST00000527158 ZEB2O60315 1214 aa17.45■□□□□ 0.38
SNRNP35-204ENST00000527158 FAM189A1O60320 539 aa17.45■□□□□ 0.38
SNRNP35-204ENST00000527158 ZNF865P0CJ78 1059 aaPredicted RBP17.45■□□□□ 0.38
SNRNP35-204ENST00000527158 PRLRP16471 622 aa17.45■□□□□ 0.38
SNRNP35-204ENST00000527158 PROZP22891 400 aa17.45■□□□□ 0.38
SNRNP35-204ENST00000527158 TNFSF9P41273 254 aa17.45■□□□□ 0.38
SNRNP35-204ENST00000527158 NOP2P46087 812 aaKnown RBP17.45■□□□□ 0.38
SNRNP35-204ENST00000527158 CRHR2Q13324 411 aa17.45■□□□□ 0.38
SNRNP35-204ENST00000527158 ZNF568Q3ZCX4 644 aa17.45■□□□□ 0.38
SNRNP35-204ENST00000527158 EXOC4Q96A65 974 aa17.45■□□□□ 0.38
SNRNP35-204ENST00000527158 APBA2Q99767 749 aa17.45■□□□□ 0.38
SNRNP35-204ENST00000527158 FDXACB1Q9BRP7 624 aaPredicted RBP17.45■□□□□ 0.38
SNRNP35-204ENST00000527158 PTPRHQ9HD43 1115 aa17.45■□□□□ 0.38
SNRNP35-204ENST00000527158 SNX12Q9UMY4 172 aa17.45■□□□□ 0.38
SNRNP35-204ENST00000527158 TNFSF13BQ9Y275 285 aa17.45■□□□□ 0.38
SNRNP35-204ENST00000527158 PTPRJQ12913 1337 aa17.44■□□□□ 0.38
SNRNP35-204ENST00000527158 ABLIM1O14639 778 aa17.44■□□□□ 0.38
SNRNP35-204ENST00000527158 CYP26A1O43174 497 aa17.44■□□□□ 0.38
SNRNP35-204ENST00000527158 PALMO75781 387 aa17.44■□□□□ 0.38
SNRNP35-204ENST00000527158 CKAP4Q07065 602 aaKnown RBP17.44■□□□□ 0.38
SNRNP35-204ENST00000527158 CCL14Q16627 93 aa17.44■□□□□ 0.38
SNRNP35-204ENST00000527158 FAM187BQ17R55 369 aa17.44■□□□□ 0.38
SNRNP35-204ENST00000527158 TLK2Q86UE8 772 aa17.44■□□□□ 0.38
SNRNP35-204ENST00000527158 IFNLR1Q8IU57 520 aaPredicted RBP17.44■□□□□ 0.38
SNRNP35-204ENST00000527158 WDR49Q8IV35 697 aa17.44■□□□□ 0.38
SNRNP35-204ENST00000527158 MINDY3Q9H8M7 445 aa17.44■□□□□ 0.38
SNRNP35-204ENST00000527158 CPSF3Q9UKF6 684 aaKnown RBP17.44■□□□□ 0.38
SNRNP35-204ENST00000527158 GJD2Q9UKL4 321 aa17.44■□□□□ 0.38
SNRNP35-204ENST00000527158 PCDHGC5Q9Y5F6 944 aa17.44■□□□□ 0.38
SNRNP35-204ENST00000527158 A0A0A6YYK5 440 aaPredicted RBP17.43■□□□□ 0.38
SNRNP35-204ENST00000527158 TMCO5BA8MYB1 307 aa17.43■□□□□ 0.38
SNRNP35-204ENST00000527158 B4GALT5O43286 388 aa17.43■□□□□ 0.38
SNRNP35-204ENST00000527158 SRGAP2O75044 1071 aa17.43■□□□□ 0.38
SNRNP35-204ENST00000527158 VTNP04004 478 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms