RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 LRCH3Q96II8 777 aa11.74□□□□□ -0.53
NEDD8-205ENST00000527046 MFSD14AQ96MC6 490 aa11.74□□□□□ -0.53
NEDD8-205ENST00000527046 ACAP3Q96P50 834 aa11.74□□□□□ -0.53
NEDD8-205ENST00000527046 PAAF1Q9BRP4 392 aa11.74□□□□□ -0.53
NEDD8-205ENST00000527046 FAM213AQ9BRX8 229 aa11.74□□□□□ -0.53
NEDD8-205ENST00000527046 MTIF3Q9H2K0 278 aaKnown RBP11.74□□□□□ -0.53
NEDD8-205ENST00000527046 CNTN3Q9P232 1028 aa11.74□□□□□ -0.53
NEDD8-205ENST00000527046 CGNQ9P2M7 1197 aaKnown RBP11.74□□□□□ -0.53
NEDD8-205ENST00000527046 CACNG4Q9UBN1 327 aa11.74□□□□□ -0.53
NEDD8-205ENST00000527046 DNAJB4Q9UDY4 337 aa11.74□□□□□ -0.53
NEDD8-205ENST00000527046 PARP2Q9UGN5 583 aa11.74□□□□□ -0.53
NEDD8-205ENST00000527046 LRFN2Q9ULH4 789 aa11.74□□□□□ -0.53
NEDD8-205ENST00000527046 TDRD15B5MCY1 1934 aaKnown RBP11.74□□□□□ -0.53
NEDD8-205ENST00000527046 TRIOBPQ9H2D6 2365 aa11.74□□□□□ -0.53
NEDD8-205ENST00000527046 TBKBP1A7MCY6 615 aa11.73□□□□□ -0.53
NEDD8-205ENST00000527046 TLL1O43897 1013 aa11.73□□□□□ -0.53
NEDD8-205ENST00000527046 AKAP3O75969 853 aa11.73□□□□□ -0.53
NEDD8-205ENST00000527046 POMCP01189 267 aa11.73□□□□□ -0.53
NEDD8-205ENST00000527046 CA3P07451 260 aa11.73□□□□□ -0.53
NEDD8-205ENST00000527046 STX17P56962 302 aa11.73□□□□□ -0.53
NEDD8-205ENST00000527046 PTPRJQ12913 1337 aa11.73□□□□□ -0.53
NEDD8-205ENST00000527046 TMEM132AQ24JP5 1023 aa11.73□□□□□ -0.53
NEDD8-205ENST00000527046 SKOR2Q2VWA4 1001 aaPredicted RBP11.73□□□□□ -0.53
NEDD8-205ENST00000527046 EDRF1Q3B7T1 1238 aa11.73□□□□□ -0.53
NEDD8-205ENST00000527046 PAN2Q504Q3 1202 aaKnown RBP11.73□□□□□ -0.53
NEDD8-205ENST00000527046 NOMO2Q5JPE7 1267 aa11.73□□□□□ -0.53
NEDD8-205ENST00000527046 HABP4Q5JVS0 413 aaKnown RBP11.73□□□□□ -0.53
NEDD8-205ENST00000527046 C11orf57Q6ZUT1 292 aaPredicted RBP11.73□□□□□ -0.53
NEDD8-205ENST00000527046 BRSK2Q8IWQ3 736 aa11.73□□□□□ -0.53
NEDD8-205ENST00000527046 EFCAB13Q8IY85 973 aa11.73□□□□□ -0.53
NEDD8-205ENST00000527046 MLKLQ8NB16 471 aa11.73□□□□□ -0.53
NEDD8-205ENST00000527046 NELFBQ8WX92 580 aa11.73□□□□□ -0.53
NEDD8-205ENST00000527046 GTPBP4Q9BZE4 634 aaKnown RBP11.73□□□□□ -0.53
NEDD8-205ENST00000527046 TRIM6Q9C030 488 aaPredicted RBP11.73□□□□□ -0.53
NEDD8-205ENST00000527046 NKX2-4Q9H2Z4 354 aa11.73□□□□□ -0.53
NEDD8-205ENST00000527046 TTYH1Q9H313 450 aaPredicted RBP11.73□□□□□ -0.53
NEDD8-205ENST00000527046 PLEKHA5Q9HAU0 1116 aa11.73□□□□□ -0.53
NEDD8-205ENST00000527046 UBN1Q9NPG3 1134 aa11.73□□□□□ -0.53
NEDD8-205ENST00000527046 RALGAPA2Q2PPJ7 1873 aa11.72□□□□□ -0.53
NEDD8-205ENST00000527046 EPOPA6NHQ4 379 aa11.72□□□□□ -0.53
NEDD8-205ENST00000527046 F8W810 466 aa11.72□□□□□ -0.53
NEDD8-205ENST00000527046 KIAA0391O15091 583 aaKnown RBP11.72□□□□□ -0.53
NEDD8-205ENST00000527046 LDHAP00338 332 aaKnown RBP11.72□□□□□ -0.53
NEDD8-205ENST00000527046 GALTP07902 379 aa11.72□□□□□ -0.53
NEDD8-205ENST00000527046 PTMSP20962 102 aa11.72□□□□□ -0.53
NEDD8-205ENST00000527046 CYP2J2P51589 502 aa11.72□□□□□ -0.53
NEDD8-205ENST00000527046 DLG4P78352 724 aa11.72□□□□□ -0.53
NEDD8-205ENST00000527046 CLDN10P78369 228 aa11.72□□□□□ -0.53
NEDD8-205ENST00000527046 ADAM9Q13443 819 aa11.72□□□□□ -0.53
NEDD8-205ENST00000527046 BTG3Q14201 252 aaPredicted RBP11.72□□□□□ -0.53
NEDD8-205ENST00000527046 SNRNP35Q16560 246 aaKnown RBP11.72□□□□□ -0.53
NEDD8-205ENST00000527046 GLRA4Q5JXX5 417 aa11.72□□□□□ -0.53
NEDD8-205ENST00000527046 GLB1LQ6UWU2 654 aa11.72□□□□□ -0.53
NEDD8-205ENST00000527046 HS2ST1Q7LGA3 356 aa11.72□□□□□ -0.53
NEDD8-205ENST00000527046 TMEM173Q86WV6 379 aaPredicted RBP11.72□□□□□ -0.53
NEDD8-205ENST00000527046 XXYLT1Q8NBI6 393 aa11.72□□□□□ -0.53
NEDD8-205ENST00000527046 RDH13Q8NBN7 331 aa11.72□□□□□ -0.53
NEDD8-205ENST00000527046 BCL7CQ8WUZ0 217 aaPredicted RBP11.72□□□□□ -0.53
NEDD8-205ENST00000527046 C18orf25Q96B23 403 aaPredicted RBP11.72□□□□□ -0.53
NEDD8-205ENST00000527046 YME1L1Q96TA2 773 aa11.72□□□□□ -0.53
NEDD8-205ENST00000527046 POP1Q99575 1024 aaKnown RBP11.72□□□□□ -0.53
NEDD8-205ENST00000527046 C17orf80Q9BSJ5 609 aa11.72□□□□□ -0.53
NEDD8-205ENST00000527046 ZBED2Q9BTP6 218 aa11.72□□□□□ -0.53
NEDD8-205ENST00000527046 CCDC94Q9BW85 323 aaPredicted RBP11.72□□□□□ -0.53
NEDD8-205ENST00000527046 HSD3B7Q9H2F3 369 aa11.72□□□□□ -0.53
NEDD8-205ENST00000527046 PDE11AQ9HCR9 933 aa11.72□□□□□ -0.53
NEDD8-205ENST00000527046 INPP5FQ9Y2H2 1132 aa11.72□□□□□ -0.53
NEDD8-205ENST00000527046 NLRC5Q86WI3 1866 aa11.72□□□□□ -0.53
NEDD8-205ENST00000527046 ZNF233A6NK53 670 aa11.71□□□□□ -0.53
NEDD8-205ENST00000527046 MAPK13O15264 365 aa11.71□□□□□ -0.53
NEDD8-205ENST00000527046 HOXA2O43364 376 aa11.71□□□□□ -0.53
NEDD8-205ENST00000527046 CALUO43852 315 aaPredicted RBP11.71□□□□□ -0.53
NEDD8-205ENST00000527046 NFICP08651 508 aa11.71□□□□□ -0.53
NEDD8-205ENST00000527046 NR2F2P24468 414 aa11.71□□□□□ -0.53
NEDD8-205ENST00000527046 DNAJB2P25686 324 aa11.71□□□□□ -0.53
NEDD8-205ENST00000527046 PBX3P40426 434 aa11.71□□□□□ -0.53
NEDD8-205ENST00000527046 MATR3P43243 847 aaKnown RBP eCLIP11.71□□□□□ -0.53
NEDD8-205ENST00000527046 ERVK-21P61565 698 aa11.71□□□□□ -0.53
NEDD8-205ENST00000527046 TYRO3Q06418 890 aa11.71□□□□□ -0.53
NEDD8-205ENST00000527046 CYP24A1Q07973 514 aa11.71□□□□□ -0.53
NEDD8-205ENST00000527046 CAMK1Q14012 370 aa11.71□□□□□ -0.53
NEDD8-205ENST00000527046 NCAPHQ15003 741 aa11.71□□□□□ -0.53
NEDD8-205ENST00000527046 PSMD6Q15008 389 aa11.71□□□□□ -0.53
NEDD8-205ENST00000527046 KYAT1Q16773 422 aa11.71□□□□□ -0.53
NEDD8-205ENST00000527046 ZSCAN23Q3MJ62 389 aa11.71□□□□□ -0.53
NEDD8-205ENST00000527046 JADE1Q6IE81 842 aa11.71□□□□□ -0.53
NEDD8-205ENST00000527046 KLHL10Q6JEL2 608 aa11.71□□□□□ -0.53
NEDD8-205ENST00000527046 FIBCD1Q8N539 461 aa11.71□□□□□ -0.53
NEDD8-205ENST00000527046 OR5B17Q8NGF7 314 aa11.71□□□□□ -0.53
NEDD8-205ENST00000527046 GOLGA5Q8TBA6 731 aa11.71□□□□□ -0.53
NEDD8-205ENST00000527046 PARD3BQ8TEW8 1205 aa11.71□□□□□ -0.53
NEDD8-205ENST00000527046 RABGGTAQ92696 567 aa11.71□□□□□ -0.53
NEDD8-205ENST00000527046 VN1R3Q9BXE9 311 aa11.71□□□□□ -0.53
NEDD8-205ENST00000527046 ASB7Q9H672 318 aa11.71□□□□□ -0.53
NEDD8-205ENST00000527046 RPF1Q9H9Y2 349 aaKnown RBP11.71□□□□□ -0.53
NEDD8-205ENST00000527046 GOLGA2P5Q9HBQ8 144 aa11.71□□□□□ -0.53
NEDD8-205ENST00000527046 MARCH5Q9NX47 278 aa11.71□□□□□ -0.53
NEDD8-205ENST00000527046 KANSL3Q9P2N6 904 aa11.71□□□□□ -0.53
NEDD8-205ENST00000527046 RWDD2AQ9UIY3 292 aa11.71□□□□□ -0.53
NEDD8-205ENST00000527046 CTNND2Q9UQB3 1225 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms