RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 REPS2Q8NFH8 660 aa5.88□□□□□ -1.47
CSDE1-210ENST00000525878 OR7D4Q8NG98 312 aa5.88□□□□□ -1.47
CSDE1-210ENST00000525878 LEO1Q8WVC0 666 aaPredicted RBP5.88□□□□□ -1.47
CSDE1-210ENST00000525878 ACAP3Q96P50 834 aa5.88□□□□□ -1.47
CSDE1-210ENST00000525878 BCO1Q9HAY6 547 aa5.88□□□□□ -1.47
CSDE1-210ENST00000525878 SCOCQ9UIL1 159 aa5.88□□□□□ -1.47
CSDE1-210ENST00000525878 MAPRE3Q9UPY8 281 aa5.88□□□□□ -1.47
CSDE1-210ENST00000525878 MRPL42Q9Y6G3 142 aaKnown RBP5.88□□□□□ -1.47
CSDE1-210ENST00000525878 SALL3Q9BXA9 1300 aa5.88□□□□□ -1.47
CSDE1-210ENST00000525878 FOSP01100 380 aaPredicted RBP5.87□□□□□ -1.47
CSDE1-210ENST00000525878 ITGAMP11215 1152 aa5.87□□□□□ -1.47
CSDE1-210ENST00000525878 SP140Q13342 867 aa5.87□□□□□ -1.47
CSDE1-210ENST00000525878 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.87□□□□□ -1.47
CSDE1-210ENST00000525878 ZNF362Q5T0B9 420 aaPredicted RBP5.87□□□□□ -1.47
CSDE1-210ENST00000525878 JAZF1Q86VZ6 243 aa5.87□□□□□ -1.47
CSDE1-210ENST00000525878 MAPKAPK5Q8IW41 473 aa5.87□□□□□ -1.47
CSDE1-210ENST00000525878 CLRN3Q8NCR9 226 aa5.87□□□□□ -1.47
CSDE1-210ENST00000525878 GPR156Q8NFN8 814 aa5.87□□□□□ -1.47
CSDE1-210ENST00000525878 RIN2Q8WYP3 895 aaPredicted RBP5.87□□□□□ -1.47
CSDE1-210ENST00000525878 RAX2Q96IS3 184 aa5.87□□□□□ -1.47
CSDE1-210ENST00000525878 LRFN3Q9BTN0 628 aa5.87□□□□□ -1.47
CSDE1-210ENST00000525878 TMEM74BQ9NUR3 256 aa5.87□□□□□ -1.47
CSDE1-210ENST00000525878 RNF181Q9P0P0 153 aa5.87□□□□□ -1.47
CSDE1-210ENST00000525878 DPP7Q9UHL4 492 aa5.87□□□□□ -1.47
CSDE1-210ENST00000525878 SPATA31A6Q5VVP1 1343 aa5.87□□□□□ -1.47
CSDE1-210ENST00000525878 PDE8AO60658 829 aa5.86□□□□□ -1.47
CSDE1-210ENST00000525878 FDXRP22570 491 aa5.86□□□□□ -1.47
CSDE1-210ENST00000525878 PTPN7P35236 360 aa5.86□□□□□ -1.47
CSDE1-210ENST00000525878 ELLP55199 621 aaPredicted RBP5.86□□□□□ -1.47
CSDE1-210ENST00000525878 SESN3P58005 492 aa5.86□□□□□ -1.47
CSDE1-210ENST00000525878 MXRA7P84157 204 aa5.86□□□□□ -1.47
CSDE1-210ENST00000525878 BOLLQ8N9W6 283 aaKnown RBP5.86□□□□□ -1.47
CSDE1-210ENST00000525878 TSPEARQ8WU66 669 aa5.86□□□□□ -1.47
CSDE1-210ENST00000525878 NELL1Q92832 810 aa5.86□□□□□ -1.47
CSDE1-210ENST00000525878 EDARQ9UNE0 448 aa5.86□□□□□ -1.47
CSDE1-210ENST00000525878 POLR2AP24928 1970 aaKnown RBP5.86□□□□□ -1.47
CSDE1-210ENST00000525878 NEMP1O14524 444 aa5.85□□□□□ -1.47
CSDE1-210ENST00000525878 ZEB2O60315 1214 aa5.85□□□□□ -1.47
CSDE1-210ENST00000525878 ULK1O75385 1050 aa5.85□□□□□ -1.47
CSDE1-210ENST00000525878 ADSLP30566 484 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-210ENST00000525878 SREBF1P36956 1147 aa5.85□□□□□ -1.47
CSDE1-210ENST00000525878 KRTAP10-11P60412 298 aa5.85□□□□□ -1.47
CSDE1-210ENST00000525878 MRPS9P82933 396 aaKnown RBP5.85□□□□□ -1.47
CSDE1-210ENST00000525878 OCA2Q04671 838 aa5.85□□□□□ -1.47
CSDE1-210ENST00000525878 ZNF169Q14929 603 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-210ENST00000525878 GJC2Q5T442 439 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-210ENST00000525878 TSHZ3Q63HK5 1081 aa5.85□□□□□ -1.47
CSDE1-210ENST00000525878 MED25Q71SY5 747 aa5.85□□□□□ -1.47
CSDE1-210ENST00000525878 DRC7Q8IY82 874 aa5.85□□□□□ -1.47
CSDE1-210ENST00000525878 SLC44A3Q8N4M1 653 aa5.85□□□□□ -1.47
CSDE1-210ENST00000525878 CAGE1Q8TC20 777 aa5.85□□□□□ -1.47
CSDE1-210ENST00000525878 HOXB13Q92826 284 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-210ENST00000525878 FUBP3Q96I24 572 aaKnown RBP eCLIP5.85□□□□□ -1.47
CSDE1-210ENST00000525878 BOD1Q96IK1 185 aa5.85□□□□□ -1.47
CSDE1-210ENST00000525878 Q96MF0 132 aa5.85□□□□□ -1.47
CSDE1-210ENST00000525878 ORAI2Q96SN7 254 aa5.85□□□□□ -1.47
CSDE1-210ENST00000525878 IFT22Q9H7X7 185 aa5.85□□□□□ -1.47
CSDE1-210ENST00000525878 A0A1B0GTW7 788 aa5.84□□□□□ -1.47
CSDE1-210ENST00000525878 AKR1B10O60218 316 aa5.84□□□□□ -1.47
CSDE1-210ENST00000525878 MYCLP1P12525 358 aaPredicted RBP5.84□□□□□ -1.47
CSDE1-210ENST00000525878 GCSHP23434 173 aa5.84□□□□□ -1.47
CSDE1-210ENST00000525878 GUCY1A2P33402 732 aa5.84□□□□□ -1.47
CSDE1-210ENST00000525878 ID4P47928 161 aa5.84□□□□□ -1.47
CSDE1-210ENST00000525878 NHLH1Q02575 133 aa5.84□□□□□ -1.47
CSDE1-210ENST00000525878 ADRM1Q16186 407 aa5.84□□□□□ -1.47
CSDE1-210ENST00000525878 RRP12Q5JTH9 1297 aaKnown RBP5.84□□□□□ -1.47
CSDE1-210ENST00000525878 RNF180Q86T96 592 aa5.84□□□□□ -1.47
CSDE1-210ENST00000525878 USP7Q93009 1102 aa5.84□□□□□ -1.47
CSDE1-210ENST00000525878 PHACTR3Q96KR7 559 aa5.84□□□□□ -1.47
CSDE1-210ENST00000525878 ALOXE3Q9BYJ1 711 aa5.84□□□□□ -1.47
CSDE1-210ENST00000525878 TLK1Q9UKI8 766 aa5.84□□□□□ -1.47
CSDE1-210ENST00000525878 CCDC78A2IDD5 438 aa5.83□□□□□ -1.48
CSDE1-210ENST00000525878 RARRES1P49788 294 aa5.83□□□□□ -1.48
CSDE1-210ENST00000525878 SIM1P81133 766 aaPredicted RBP5.83□□□□□ -1.48
CSDE1-210ENST00000525878 CDK17Q00537 523 aa5.83□□□□□ -1.48
CSDE1-210ENST00000525878 SPDYE7PQ495Y7 208 aa5.83□□□□□ -1.48
CSDE1-210ENST00000525878 AFMIDQ63HM1 303 aa5.83□□□□□ -1.48
CSDE1-210ENST00000525878 OTUD7BQ6GQQ9 843 aa5.83□□□□□ -1.48
CSDE1-210ENST00000525878 Q6ZNX1 250 aa5.83□□□□□ -1.48
CSDE1-210ENST00000525878 KCNK18Q7Z418 384 aa5.83□□□□□ -1.48
CSDE1-210ENST00000525878 FAM43AQ8N2R8 423 aa5.83□□□□□ -1.48
CSDE1-210ENST00000525878 LMBR1Q8WVP7 490 aa5.83□□□□□ -1.48
CSDE1-210ENST00000525878 AUTS2Q8WXX7 1259 aa5.83□□□□□ -1.48
CSDE1-210ENST00000525878 ZSWIM1Q9BR11 485 aa5.83□□□□□ -1.48
CSDE1-210ENST00000525878 MRI1Q9BV20 369 aa5.83□□□□□ -1.48
CSDE1-210ENST00000525878 RSAD1Q9HA92 442 aa5.83□□□□□ -1.48
CSDE1-210ENST00000525878 FOXJ2Q9P0K8 574 aa5.83□□□□□ -1.48
CSDE1-210ENST00000525878 ENPP3O14638 875 aa5.82□□□□□ -1.48
CSDE1-210ENST00000525878 IGLV2-14P01704 120 aa5.82□□□□□ -1.48
CSDE1-210ENST00000525878 ECHS1P30084 290 aa5.82□□□□□ -1.48
CSDE1-210ENST00000525878 ATXN1P54253 815 aaKnown RBP5.82□□□□□ -1.48
CSDE1-210ENST00000525878 RAP2BP61225 183 aa5.82□□□□□ -1.48
CSDE1-210ENST00000525878 CXADRP78310 365 aa5.82□□□□□ -1.48
CSDE1-210ENST00000525878 PPP3CAQ08209 521 aa5.82□□□□□ -1.48
CSDE1-210ENST00000525878 UBXN2BQ14CS0 331 aa5.82□□□□□ -1.48
CSDE1-210ENST00000525878 MUM1Q2TAK8 710 aa5.82□□□□□ -1.48
CSDE1-210ENST00000525878 FATE1Q969F0 183 aa5.82□□□□□ -1.48
CSDE1-210ENST00000525878 NACC2Q96BF6 587 aa5.82□□□□□ -1.48
CSDE1-210ENST00000525878 TTC1Q99614 292 aa5.82□□□□□ -1.48
CSDE1-210ENST00000525878 DUSP26Q9BV47 211 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms