RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 HACE1Q8IYU2 909 aa13.78□□□□□ -0.2
SMCO4-202ENST00000525141 ASIC4Q96FT7 647 aa13.78□□□□□ -0.2
SMCO4-202ENST00000525141 TARS2Q9BW92 718 aaKnown RBP13.78□□□□□ -0.2
SMCO4-202ENST00000525141 NT5C3AQ9H0P0 336 aa13.78□□□□□ -0.2
SMCO4-202ENST00000525141 DZANK1Q9NVP4 752 aa13.78□□□□□ -0.2
SMCO4-202ENST00000525141 FBXO2Q9UK22 296 aaPredicted RBP13.78□□□□□ -0.2
SMCO4-202ENST00000525141 ADAM28Q9UKQ2 775 aa13.78□□□□□ -0.2
SMCO4-202ENST00000525141 GDAQ9Y2T3 454 aa13.78□□□□□ -0.2
SMCO4-202ENST00000525141 ATP6V1DQ9Y5K8 247 aa13.78□□□□□ -0.2
SMCO4-202ENST00000525141 ZMYM2Q9UBW7 1377 aa13.78□□□□□ -0.2
SMCO4-202ENST00000525141 PLXNA3P51805 1871 aa13.78□□□□□ -0.2
SMCO4-202ENST00000525141 TCHHQ07283 1943 aa13.78□□□□□ -0.2
SMCO4-202ENST00000525141 MTCL1Q9Y4B5 1905 aaKnown RBP13.78□□□□□ -0.2
SMCO4-202ENST00000525141 CASTOR2A6NHX0 329 aa13.77□□□□□ -0.21
SMCO4-202ENST00000525141 SLC16A4O15374 487 aa13.77□□□□□ -0.21
SMCO4-202ENST00000525141 TADA2AO75478 443 aa13.77□□□□□ -0.21
SMCO4-202ENST00000525141 PAPLNO95428 1278 aa13.77□□□□□ -0.21
SMCO4-202ENST00000525141 THP07101 528 aa13.77□□□□□ -0.21
SMCO4-202ENST00000525141 PLA2G4BP0C869 781 aa13.77□□□□□ -0.21
SMCO4-202ENST00000525141 RPL17P18621 184 aaKnown RBP13.77□□□□□ -0.21
SMCO4-202ENST00000525141 RAD51AP2Q09MP3 1159 aa13.77□□□□□ -0.21
SMCO4-202ENST00000525141 HSP90AA2PQ14568 343 aaPredicted RBP13.77□□□□□ -0.21
SMCO4-202ENST00000525141 STK38Q15208 465 aa13.77□□□□□ -0.21
SMCO4-202ENST00000525141 USP41Q3LFD5 358 aa13.77□□□□□ -0.21
SMCO4-202ENST00000525141 RTP2Q5QGT7 225 aa13.77□□□□□ -0.21
SMCO4-202ENST00000525141 ZNF318Q5VUA4 2279 aa13.77□□□□□ -0.21
SMCO4-202ENST00000525141 GPR65Q8IYL9 337 aa13.77□□□□□ -0.21
SMCO4-202ENST00000525141 TMEM87AQ8NBN3 555 aa13.77□□□□□ -0.21
SMCO4-202ENST00000525141 LNX1Q8TBB1 728 aaPredicted RBP13.77□□□□□ -0.21
SMCO4-202ENST00000525141 ZMAT2Q96NC0 199 aaKnown RBP13.77□□□□□ -0.21
SMCO4-202ENST00000525141 NECTIN4Q96NY8 510 aa13.77□□□□□ -0.21
SMCO4-202ENST00000525141 PPP1R10Q96QC0 940 aaKnown RBP13.77□□□□□ -0.21
SMCO4-202ENST00000525141 CLSTN3Q9BQT9 956 aa13.77□□□□□ -0.21
SMCO4-202ENST00000525141 HAPLN2Q9GZV7 340 aa13.77□□□□□ -0.21
SMCO4-202ENST00000525141 CDT1Q9H211 546 aa13.77□□□□□ -0.21
SMCO4-202ENST00000525141 SMOC2Q9H3U7 446 aa13.77□□□□□ -0.21
SMCO4-202ENST00000525141 BLOC1S4Q9NUP1 217 aa13.77□□□□□ -0.21
SMCO4-202ENST00000525141 FNIP2Q9P278 1114 aa13.77□□□□□ -0.21
SMCO4-202ENST00000525141 DAXXQ9UER7 740 aaPredicted RBP13.77□□□□□ -0.21
SMCO4-202ENST00000525141 LIMD1Q9UGP4 676 aa13.77□□□□□ -0.21
SMCO4-202ENST00000525141 SMIM28A0A1B0GU29 152 aa13.76□□□□□ -0.21
SMCO4-202ENST00000525141 CCDC195A0A1B0GUA6 201 aa13.76□□□□□ -0.21
SMCO4-202ENST00000525141 TMEM221A6NGB7 291 aa13.76□□□□□ -0.21
SMCO4-202ENST00000525141 M0R296 226 aa13.76□□□□□ -0.21
SMCO4-202ENST00000525141 SPTLC2O15270 562 aa13.76□□□□□ -0.21
SMCO4-202ENST00000525141 ADAM12O43184 909 aa13.76□□□□□ -0.21
SMCO4-202ENST00000525141 NR1I2O75469 434 aa13.76□□□□□ -0.21
SMCO4-202ENST00000525141 KIF4AO95239 1232 aa13.76□□□□□ -0.21
SMCO4-202ENST00000525141 URODP06132 367 aa13.76□□□□□ -0.21
SMCO4-202ENST00000525141 SOX4Q06945 474 aaPredicted RBP13.76□□□□□ -0.21
SMCO4-202ENST00000525141 PTPN21Q16825 1174 aa13.76□□□□□ -0.21
SMCO4-202ENST00000525141 PRSS55Q6UWB4 352 aaPredicted RBP13.76□□□□□ -0.21
SMCO4-202ENST00000525141 USP49Q70CQ1 688 aa13.76□□□□□ -0.21
SMCO4-202ENST00000525141 KRI1Q8N9T8 703 aaKnown RBP13.76□□□□□ -0.21
SMCO4-202ENST00000525141 TMEM161BQ8NDZ6 487 aa13.76□□□□□ -0.21
SMCO4-202ENST00000525141 HASPINQ8TF76 798 aa13.76□□□□□ -0.21
SMCO4-202ENST00000525141 SPIRE2Q8WWL2 714 aa13.76□□□□□ -0.21
SMCO4-202ENST00000525141 RIN2Q8WYP3 895 aaPredicted RBP13.76□□□□□ -0.21
SMCO4-202ENST00000525141 ZNF707Q96C28 371 aaPredicted RBP13.76□□□□□ -0.21
SMCO4-202ENST00000525141 CALML4Q96GE6 196 aa13.76□□□□□ -0.21
SMCO4-202ENST00000525141 RIPOR3Q96MK2 946 aa13.76□□□□□ -0.21
SMCO4-202ENST00000525141 CCSER1Q9C0I3 900 aa13.76□□□□□ -0.21
SMCO4-202ENST00000525141 KMT5AQ9NQR1 393 aa13.76□□□□□ -0.21
SMCO4-202ENST00000525141 RCOR1Q9UKL0 485 aa13.76□□□□□ -0.21
SMCO4-202ENST00000525141 SSX2IPQ9Y2D8 614 aa13.76□□□□□ -0.21
SMCO4-202ENST00000525141 RBM19Q9Y4C8 960 aaKnown RBP13.76□□□□□ -0.21
SMCO4-202ENST00000525141 C2orf16Q68DN1 1984 aa13.76□□□□□ -0.21
SMCO4-202ENST00000525141 VWA8A3KMH1 1905 aa13.75□□□□□ -0.21
SMCO4-202ENST00000525141 TGM5O43548 720 aa13.75□□□□□ -0.21
SMCO4-202ENST00000525141 N4BP1O75113 896 aaKnown RBP13.75□□□□□ -0.21
SMCO4-202ENST00000525141 RFPL2O75678 378 aa13.75□□□□□ -0.21
SMCO4-202ENST00000525141 PLS3P13797 630 aa13.75□□□□□ -0.21
SMCO4-202ENST00000525141 PLA2G5P39877 138 aa13.75□□□□□ -0.21
SMCO4-202ENST00000525141 GRM5P41594 1212 aa13.75□□□□□ -0.21
SMCO4-202ENST00000525141 CLCNKBP51801 687 aa13.75□□□□□ -0.21
SMCO4-202ENST00000525141 OSTNP61366 133 aa13.75□□□□□ -0.21
SMCO4-202ENST00000525141 DNM1Q05193 864 aaKnown RBP13.75□□□□□ -0.21
SMCO4-202ENST00000525141 TMEM132AQ24JP5 1023 aa13.75□□□□□ -0.21
SMCO4-202ENST00000525141 DCAF4L1Q3SXM0 396 aa13.75□□□□□ -0.21
SMCO4-202ENST00000525141 GLRA4Q5JXX5 417 aa13.75□□□□□ -0.21
SMCO4-202ENST00000525141 IER5LQ5T953 404 aa13.75□□□□□ -0.21
SMCO4-202ENST00000525141 FAM171A1Q5VUB5 890 aa13.75□□□□□ -0.21
SMCO4-202ENST00000525141 RSPO2Q6UXX9 243 aaPredicted RBP13.75□□□□□ -0.21
SMCO4-202ENST00000525141 ZBTB33Q86T24 672 aa13.75□□□□□ -0.21
SMCO4-202ENST00000525141 ZDHHC14Q8IZN3 488 aa13.75□□□□□ -0.21
SMCO4-202ENST00000525141 TMEM130Q8N3G9 435 aa13.75□□□□□ -0.21
SMCO4-202ENST00000525141 CMASQ8NFW8 434 aaPredicted RBP13.75□□□□□ -0.21
SMCO4-202ENST00000525141 KCNG4Q8TDN1 519 aa13.75□□□□□ -0.21
SMCO4-202ENST00000525141 CDK5RAP3Q96JB5 506 aa13.75□□□□□ -0.21
SMCO4-202ENST00000525141 DRC1Q96MC2 740 aa13.75□□□□□ -0.21
SMCO4-202ENST00000525141 ADPGKQ9BRR6 497 aa13.75□□□□□ -0.21
SMCO4-202ENST00000525141 SFXN1Q9H9B4 322 aa13.75□□□□□ -0.21
SMCO4-202ENST00000525141 C17orf75Q9HAS0 396 aa13.75□□□□□ -0.21
SMCO4-202ENST00000525141 GOLGA2P5Q9HBQ8 144 aa13.75□□□□□ -0.21
SMCO4-202ENST00000525141 MAN1C1Q9NR34 630 aa13.75□□□□□ -0.21
SMCO4-202ENST00000525141 TSHZ2Q9NRE2 1034 aa13.75□□□□□ -0.21
SMCO4-202ENST00000525141 MUC6Q6W4X9 2439 aa13.75□□□□□ -0.21
SMCO4-202ENST00000525141 GABBR2O75899 941 aa13.74□□□□□ -0.21
SMCO4-202ENST00000525141 C1RP00736 705 aa13.74□□□□□ -0.21
SMCO4-202ENST00000525141 ASGR2P07307 311 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms