RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 MUTYHQ9UIF7 546 aa12.25□□□□□ -0.45
TRAPPC4-204ENST00000524797 ODF2LQ9ULJ1 636 aa12.25□□□□□ -0.45
TRAPPC4-204ENST00000524797 SRPRBQ9Y5M8 271 aaKnown RBP12.25□□□□□ -0.45
TRAPPC4-204ENST00000524797 TEX28O15482 410 aa12.24□□□□□ -0.45
TRAPPC4-204ENST00000524797 STX6O43752 255 aa12.24□□□□□ -0.45
TRAPPC4-204ENST00000524797 KIF4AO95239 1232 aa12.24□□□□□ -0.45
TRAPPC4-204ENST00000524797 ADH1AP07327 375 aa12.24□□□□□ -0.45
TRAPPC4-204ENST00000524797 WEE2P0C1S8 567 aa12.24□□□□□ -0.45
TRAPPC4-204ENST00000524797 COL9A1P20849 921 aa12.24□□□□□ -0.45
TRAPPC4-204ENST00000524797 XKR4Q5GH76 650 aa12.24□□□□□ -0.45
TRAPPC4-204ENST00000524797 HERC4Q5GLZ8 1057 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC4-204ENST00000524797 GLRA4Q5JXX5 417 aa12.24□□□□□ -0.45
TRAPPC4-204ENST00000524797 SPECC1Q5M775 1068 aa12.24□□□□□ -0.45
TRAPPC4-204ENST00000524797 KIAA1841Q6NSI8 718 aa12.24□□□□□ -0.45
TRAPPC4-204ENST00000524797 USP49Q70CQ1 688 aa12.24□□□□□ -0.45
TRAPPC4-204ENST00000524797 HASPINQ8TF76 798 aa12.24□□□□□ -0.45
TRAPPC4-204ENST00000524797 EPSTI1Q96J88 318 aa12.24□□□□□ -0.45
TRAPPC4-204ENST00000524797 RIPOR3Q96MK2 946 aa12.24□□□□□ -0.45
TRAPPC4-204ENST00000524797 POMKQ9H5K3 350 aa12.24□□□□□ -0.45
TRAPPC4-204ENST00000524797 SFXN1Q9H9B4 322 aa12.24□□□□□ -0.45
TRAPPC4-204ENST00000524797 MORC2Q9Y6X9 1032 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC4-204ENST00000524797 ANK1P16157 1881 aa12.24□□□□□ -0.45
TRAPPC4-204ENST00000524797 H0YCG3 227 aa12.23□□□□□ -0.45
TRAPPC4-204ENST00000524797 FAM13AO94988 1023 aa12.23□□□□□ -0.45
TRAPPC4-204ENST00000524797 ZNF131P52739 623 aa12.23□□□□□ -0.45
TRAPPC4-204ENST00000524797 YARSP54577 528 aaKnown RBP12.23□□□□□ -0.45
TRAPPC4-204ENST00000524797 OSTNP61366 133 aa12.23□□□□□ -0.45
TRAPPC4-204ENST00000524797 CEBPZQ03701 1054 aaKnown RBP12.23□□□□□ -0.45
TRAPPC4-204ENST00000524797 ALKAL1Q6UXT8 129 aa12.23□□□□□ -0.45
TRAPPC4-204ENST00000524797 FEZF2Q8TBJ5 459 aa12.23□□□□□ -0.45
TRAPPC4-204ENST00000524797 RIN2Q8WYP3 895 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC4-204ENST00000524797 KCNN1Q92952 543 aa12.23□□□□□ -0.45
TRAPPC4-204ENST00000524797 SNX27Q96L92 541 aa12.23□□□□□ -0.45
TRAPPC4-204ENST00000524797 CLIC6Q96NY7 704 aa12.23□□□□□ -0.45
TRAPPC4-204ENST00000524797 USP28Q96RU2 1077 aa12.23□□□□□ -0.45
TRAPPC4-204ENST00000524797 TCHPQ9BT92 498 aa12.23□□□□□ -0.45
TRAPPC4-204ENST00000524797 ZSCAN16Q9H4T2 348 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC4-204ENST00000524797 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.23□□□□□ -0.45
TRAPPC4-204ENST00000524797 FNIP2Q9P278 1114 aa12.23□□□□□ -0.45
TRAPPC4-204ENST00000524797 LARSQ9P2J5 1176 aaKnown RBP12.23□□□□□ -0.45
TRAPPC4-204ENST00000524797 SF3B1O75533 1304 aaKnown RBP eCLIP12.23□□□□□ -0.45
TRAPPC4-204ENST00000524797 SMIM28A0A1B0GU29 152 aa12.23□□□□□ -0.45
TRAPPC4-204ENST00000524797 TOM1L1O75674 476 aa12.23□□□□□ -0.45
TRAPPC4-204ENST00000524797 KRT18P05783 430 aaKnown RBP12.23□□□□□ -0.45
TRAPPC4-204ENST00000524797 HARSP12081 509 aaKnown RBP12.23□□□□□ -0.45
TRAPPC4-204ENST00000524797 CREMQ03060 361 aa12.23□□□□□ -0.45
TRAPPC4-204ENST00000524797 NOLC1Q14978 699 aaKnown RBP eCLIP12.23□□□□□ -0.45
TRAPPC4-204ENST00000524797 RTP2Q5QGT7 225 aa12.23□□□□□ -0.45
TRAPPC4-204ENST00000524797 ZPBP2Q6X784 338 aa12.23□□□□□ -0.45
TRAPPC4-204ENST00000524797 HAUS6Q7Z4H7 955 aa12.23□□□□□ -0.45
TRAPPC4-204ENST00000524797 HSCBQ8IWL3 235 aa12.23□□□□□ -0.45
TRAPPC4-204ENST00000524797 MYCT1Q8N699 235 aa12.23□□□□□ -0.45
TRAPPC4-204ENST00000524797 LARP4BQ92615 738 aaKnown RBP12.23□□□□□ -0.45
TRAPPC4-204ENST00000524797 UROC1Q96N76 676 aa12.23□□□□□ -0.45
TRAPPC4-204ENST00000524797 ACAP3Q96P50 834 aa12.23□□□□□ -0.45
TRAPPC4-204ENST00000524797 MAN1C1Q9NR34 630 aa12.23□□□□□ -0.45
TRAPPC4-204ENST00000524797 TOPORSQ9NS56 1045 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC4-204ENST00000524797 RAPGEFL1Q9UHV5 662 aa12.23□□□□□ -0.45
TRAPPC4-204ENST00000524797 MYO10Q9HD67 2058 aa12.22□□□□□ -0.45
TRAPPC4-204ENST00000524797 TMEM189-UBE2V1I3L0A0 370 aa12.22□□□□□ -0.45
TRAPPC4-204ENST00000524797 MEFVO15553 781 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC4-204ENST00000524797 GLUD1P00367 558 aa12.22□□□□□ -0.45
TRAPPC4-204ENST00000524797 RPL17P18621 184 aaKnown RBP12.22□□□□□ -0.45
TRAPPC4-204ENST00000524797 IGFBP6P24592 240 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC4-204ENST00000524797 SLC39A14Q15043 492 aa12.22□□□□□ -0.45
TRAPPC4-204ENST00000524797 ATAT1Q5SQI0 421 aa12.22□□□□□ -0.45
TRAPPC4-204ENST00000524797 FAM171A1Q5VUB5 890 aa12.22□□□□□ -0.45
TRAPPC4-204ENST00000524797 PRSS55Q6UWB4 352 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC4-204ENST00000524797 CD300LGQ6UXG3 332 aa12.22□□□□□ -0.45
TRAPPC4-204ENST00000524797 TMC5Q6UXY8 1006 aa12.22□□□□□ -0.45
TRAPPC4-204ENST00000524797 GPR149Q86SP6 731 aa12.22□□□□□ -0.45
TRAPPC4-204ENST00000524797 CMASQ8NFW8 434 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC4-204ENST00000524797 PARVGQ9HBI0 331 aa12.22□□□□□ -0.45
TRAPPC4-204ENST00000524797 ANKFY1Q9P2R3 1169 aa12.22□□□□□ -0.45
TRAPPC4-204ENST00000524797 STK17AQ9UEE5 414 aa12.22□□□□□ -0.45
TRAPPC4-204ENST00000524797 CCDC39Q9UFE4 941 aa12.22□□□□□ -0.45
TRAPPC4-204ENST00000524797 NR2E1Q9Y466 385 aa12.22□□□□□ -0.45
TRAPPC4-204ENST00000524797 SPDYE4A6NLX3 237 aa12.21□□□□□ -0.45
TRAPPC4-204ENST00000524797 K7ENM7 598 aa12.21□□□□□ -0.45
TRAPPC4-204ENST00000524797 TBCAO75347 108 aaKnown RBP12.21□□□□□ -0.45
TRAPPC4-204ENST00000524797 C1RP00736 705 aa12.21□□□□□ -0.45
TRAPPC4-204ENST00000524797 KCNE1P15382 129 aa12.21□□□□□ -0.45
TRAPPC4-204ENST00000524797 SCP2P22307 547 aa12.21□□□□□ -0.45
TRAPPC4-204ENST00000524797 SP100P23497 879 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC4-204ENST00000524797 DDIT3P35638 169 aa12.21□□□□□ -0.45
TRAPPC4-204ENST00000524797 NASPP49321 788 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC4-204ENST00000524797 CLCNKBP51801 687 aa12.21□□□□□ -0.45
TRAPPC4-204ENST00000524797 SOX4Q06945 474 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC4-204ENST00000524797 MCL1Q07820 350 aa12.21□□□□□ -0.45
TRAPPC4-204ENST00000524797 ELAVL2Q12926 359 aaKnown RBP12.21□□□□□ -0.45
TRAPPC4-204ENST00000524797 DCLRE1AQ6PJP8 1040 aa12.21□□□□□ -0.45
TRAPPC4-204ENST00000524797 PALB2Q86YC2 1186 aa12.21□□□□□ -0.45
TRAPPC4-204ENST00000524797 HDAC7Q8WUI4 952 aa12.21□□□□□ -0.45
TRAPPC4-204ENST00000524797 PIK3R5Q8WYR1 880 aa12.21□□□□□ -0.45
TRAPPC4-204ENST00000524797 BICD1Q96G01 975 aa12.21□□□□□ -0.45
TRAPPC4-204ENST00000524797 ZMAT2Q96NC0 199 aaKnown RBP12.21□□□□□ -0.45
TRAPPC4-204ENST00000524797 TTPALQ9BTX7 342 aa12.21□□□□□ -0.45
TRAPPC4-204ENST00000524797 HAPLN2Q9GZV7 340 aa12.21□□□□□ -0.45
TRAPPC4-204ENST00000524797 GOLGA2P5Q9HBQ8 144 aa12.21□□□□□ -0.45
TRAPPC4-204ENST00000524797 CNTN3Q9P232 1028 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms