RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 SMAD4Q13485 552 aaKnown RBP22.85■■□□□ 1.25
TRAPPC9-215ENST00000524162 HSP90AA2PQ14568 343 aaPredicted RBP22.85■■□□□ 1.25
TRAPPC9-215ENST00000524162 PTPN14Q15678 1187 aa22.85■■□□□ 1.25
TRAPPC9-215ENST00000524162 RESP18Q5W5W9 173 aa22.85■■□□□ 1.25
TRAPPC9-215ENST00000524162 PTCRAQ6ISU1 281 aaPredicted RBP22.85■■□□□ 1.25
TRAPPC9-215ENST00000524162 RBM23Q86U06 439 aaKnown RBP22.85■■□□□ 1.25
TRAPPC9-215ENST00000524162 PPFIBP1Q86W92 1011 aa22.85■■□□□ 1.25
TRAPPC9-215ENST00000524162 SMRP1Q8NCR6 262 aa22.85■■□□□ 1.25
TRAPPC9-215ENST00000524162 PLEKHA5Q9HAU0 1116 aa22.85■■□□□ 1.25
TRAPPC9-215ENST00000524162 CHST7Q9NS84 486 aa22.85■■□□□ 1.25
TRAPPC9-215ENST00000524162 CNTN3Q9P232 1028 aa22.85■■□□□ 1.25
TRAPPC9-215ENST00000524162 PRKAG3Q9UGI9 489 aa22.85■■□□□ 1.25
TRAPPC9-215ENST00000524162 ADAM28Q9UKQ2 775 aa22.85■■□□□ 1.25
TRAPPC9-215ENST00000524162 MTCL1Q9Y4B5 1905 aaKnown RBP22.84■■□□□ 1.25
TRAPPC9-215ENST00000524162 HNRNPDLO14979 420 aaKnown RBP22.84■■□□□ 1.25
TRAPPC9-215ENST00000524162 LINC01565O15544 149 aa22.84■■□□□ 1.25
TRAPPC9-215ENST00000524162 CLTAP09496 248 aa22.84■■□□□ 1.25
TRAPPC9-215ENST00000524162 NDUFV1P49821 464 aa22.84■■□□□ 1.25
TRAPPC9-215ENST00000524162 LIG4P49917 911 aa22.84■■□□□ 1.25
TRAPPC9-215ENST00000524162 DLX2Q07687 328 aaPredicted RBP22.84■■□□□ 1.25
TRAPPC9-215ENST00000524162 DYMQ7RTS9 669 aa22.84■■□□□ 1.25
TRAPPC9-215ENST00000524162 PDILTQ8N807 584 aa22.84■■□□□ 1.25
TRAPPC9-215ENST00000524162 CEP120Q8N960 986 aa22.84■■□□□ 1.25
TRAPPC9-215ENST00000524162 SNX27Q96L92 541 aa22.84■■□□□ 1.25
TRAPPC9-215ENST00000524162 ZHX3Q9H4I2 956 aa22.84■■□□□ 1.25
TRAPPC9-215ENST00000524162 MRPL17Q9NRX2 175 aaKnown RBP22.84■■□□□ 1.25
TRAPPC9-215ENST00000524162 FAM13BQ9NYF5 915 aa22.84■■□□□ 1.25
TRAPPC9-215ENST00000524162 CD207Q9UJ71 328 aa22.84■■□□□ 1.25
TRAPPC9-215ENST00000524162 PRG3Q9Y2Y8 225 aaPredicted RBP22.84■■□□□ 1.25
TRAPPC9-215ENST00000524162 STYXL1Q9Y6J8 313 aa22.84■■□□□ 1.25
TRAPPC9-215ENST00000524162 SMIM28A0A1B0GU29 152 aa22.83■■□□□ 1.25
TRAPPC9-215ENST00000524162 H3BQ06 376 aaPredicted RBP22.83■■□□□ 1.25
TRAPPC9-215ENST00000524162 PER2O15055 1255 aa22.83■■□□□ 1.25
TRAPPC9-215ENST00000524162 ELAVL2Q12926 359 aaKnown RBP22.83■■□□□ 1.25
TRAPPC9-215ENST00000524162 SMAD2Q15796 467 aaKnown RBP22.83■■□□□ 1.25
TRAPPC9-215ENST00000524162 ADALQ6DHV7 355 aa22.83■■□□□ 1.25
TRAPPC9-215ENST00000524162 SLFN12LQ6IEE8 588 aa22.83■■□□□ 1.25
TRAPPC9-215ENST00000524162 SFR1Q86XK3 245 aa22.83■■□□□ 1.25
TRAPPC9-215ENST00000524162 CASP10Q92851 521 aa22.83■■□□□ 1.25
TRAPPC9-215ENST00000524162 BICD1Q96G01 975 aa22.83■■□□□ 1.25
TRAPPC9-215ENST00000524162 DDX27Q96GQ7 796 aaKnown RBP22.83■■□□□ 1.25
TRAPPC9-215ENST00000524162 ZBTB45Q96K62 511 aaPredicted RBP22.83■■□□□ 1.25
TRAPPC9-215ENST00000524162 UHRF1Q96T88 793 aaPredicted RBP22.83■■□□□ 1.25
TRAPPC9-215ENST00000524162 EMILIN2Q9BXX0 1053 aa22.83■■□□□ 1.25
TRAPPC9-215ENST00000524162 PANK2Q9BZ23 570 aa22.83■■□□□ 1.25
TRAPPC9-215ENST00000524162 SCAND2PQ9GZW5 306 aaPredicted RBP22.83■■□□□ 1.25
TRAPPC9-215ENST00000524162 ANKFY1Q9P2R3 1169 aa22.83■■□□□ 1.25
TRAPPC9-215ENST00000524162 SF3B1O75533 1304 aaKnown RBP eCLIP22.82■■□□□ 1.243e-6■■■■■ 124.8
TRAPPC9-215ENST00000524162 A0A0B4J269 797 aa22.82■■□□□ 1.24
TRAPPC9-215ENST00000524162 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.82■■□□□ 1.24
TRAPPC9-215ENST00000524162 FAM189A1O60320 539 aa22.82■■□□□ 1.24
TRAPPC9-215ENST00000524162 CLASP2O75122 1294 aaKnown RBP22.82■■□□□ 1.24
TRAPPC9-215ENST00000524162 CSPG5O95196 566 aa22.82■■□□□ 1.24
TRAPPC9-215ENST00000524162 URODP06132 367 aa22.82■■□□□ 1.24
TRAPPC9-215ENST00000524162 ADRB2P07550 413 aa22.82■■□□□ 1.24
TRAPPC9-215ENST00000524162 NMT1P30419 496 aaKnown RBP22.82■■□□□ 1.24
TRAPPC9-215ENST00000524162 DSG1Q02413 1049 aa22.82■■□□□ 1.24
TRAPPC9-215ENST00000524162 CREMQ03060 361 aa22.82■■□□□ 1.24
TRAPPC9-215ENST00000524162 USP41Q3LFD5 358 aa22.82■■□□□ 1.24
TRAPPC9-215ENST00000524162 KIAA0319Q5VV43 1072 aa22.82■■□□□ 1.24
TRAPPC9-215ENST00000524162 FUT10Q6P4F1 479 aa22.82■■□□□ 1.24
TRAPPC9-215ENST00000524162 ZBTB33Q86T24 672 aa22.82■■□□□ 1.24
TRAPPC9-215ENST00000524162 CCDC65Q8IXS2 484 aa22.82■■□□□ 1.24
TRAPPC9-215ENST00000524162 VN1R2Q8NFZ6 395 aa22.82■■□□□ 1.24
TRAPPC9-215ENST00000524162 TRIM9Q9C026 710 aa22.82■■□□□ 1.24
TRAPPC9-215ENST00000524162 RXFP1Q9HBX9 757 aa22.82■■□□□ 1.24
TRAPPC9-215ENST00000524162 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.82■■□□□ 1.24
TRAPPC9-215ENST00000524162 PCDHB13Q9Y5F0 798 aa22.82■■□□□ 1.24
TRAPPC9-215ENST00000524162 VWA8A3KMH1 1905 aa22.81■■□□□ 1.24
TRAPPC9-215ENST00000524162 OGTO15294 1046 aa22.81■■□□□ 1.24
TRAPPC9-215ENST00000524162 MBTPS2O43462 519 aa22.81■■□□□ 1.24
TRAPPC9-215ENST00000524162 CMA1P23946 247 aa22.81■■□□□ 1.24
TRAPPC9-215ENST00000524162 GLUD2P49448 558 aa22.81■■□□□ 1.24
TRAPPC9-215ENST00000524162 FOXD4L6Q3SYB3 417 aaPredicted RBP22.81■■□□□ 1.24
TRAPPC9-215ENST00000524162 DCLRE1AQ6PJP8 1040 aa22.81■■□□□ 1.24
TRAPPC9-215ENST00000524162 FOXD4L3Q6VB84 417 aaPredicted RBP22.81■■□□□ 1.24
TRAPPC9-215ENST00000524162 EP400NLQ6ZTU2 488 aa22.81■■□□□ 1.24
TRAPPC9-215ENST00000524162 LEO1Q8WVC0 666 aaPredicted RBP22.81■■□□□ 1.24
TRAPPC9-215ENST00000524162 HAPLN2Q9GZV7 340 aa22.81■■□□□ 1.24
TRAPPC9-215ENST00000524162 MRPL44Q9H9J2 332 aaKnown RBP22.81■■□□□ 1.24
TRAPPC9-215ENST00000524162 EXOC7Q9UPT5 735 aa22.81■■□□□ 1.24
TRAPPC9-215ENST00000524162 HCFC2Q9Y5Z7 792 aa22.81■■□□□ 1.24
TRAPPC9-215ENST00000524162 ANK1P16157 1881 aa22.81■■□□□ 1.24
TRAPPC9-215ENST00000524162 TADA2AO75478 443 aa22.8■■□□□ 1.24
TRAPPC9-215ENST00000524162 RPL9P32969 192 aaKnown RBP22.8■■□□□ 1.24
TRAPPC9-215ENST00000524162 NUCB2P80303 420 aa22.8■■□□□ 1.24
TRAPPC9-215ENST00000524162 POSTNQ15063 836 aa22.8■■□□□ 1.24
TRAPPC9-215ENST00000524162 UPP1Q16831 310 aa22.8■■□□□ 1.24
TRAPPC9-215ENST00000524162 SLC10A6Q3KNW5 377 aa22.8■■□□□ 1.24
TRAPPC9-215ENST00000524162 HERC4Q5GLZ8 1057 aaPredicted RBP22.8■■□□□ 1.24
TRAPPC9-215ENST00000524162 ANKRD54Q6NXT1 300 aa22.8■■□□□ 1.24
TRAPPC9-215ENST00000524162 PDXDC1Q6P996 788 aa22.8■■□□□ 1.24
TRAPPC9-215ENST00000524162 CD302Q8IX05 232 aa22.8■■□□□ 1.24
TRAPPC9-215ENST00000524162 TMEM87AQ8NBN3 555 aa22.8■■□□□ 1.24
TRAPPC9-215ENST00000524162 SLC22A17Q8WUG5 538 aa22.8■■□□□ 1.24
TRAPPC9-215ENST00000524162 SPATA32Q96LK8 384 aa22.8■■□□□ 1.24
TRAPPC9-215ENST00000524162 C7orf25Q9BPX7 421 aa22.8■■□□□ 1.24
TRAPPC9-215ENST00000524162 GPR62Q9BZJ7 368 aa22.8■■□□□ 1.24
TRAPPC9-215ENST00000524162 CXCL16Q9H2A7 254 aa22.8■■□□□ 1.24
TRAPPC9-215ENST00000524162 PANK4Q9NVE7 773 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms