RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 ARSHQ5FYA8 562 aa17.79■□□□□ 0.44
CLN8-206ENST00000523237 GLRA4Q5JXX5 417 aa17.79■□□□□ 0.44
CLN8-206ENST00000523237 C15orf39Q6ZRI6 1047 aa17.79■□□□□ 0.44
CLN8-206ENST00000523237 GPR149Q86SP6 731 aa17.79■□□□□ 0.44
CLN8-206ENST00000523237 ZBTB33Q86T24 672 aa17.79■□□□□ 0.44
CLN8-206ENST00000523237 GPBP1Q86WP2 473 aa17.79■□□□□ 0.44
CLN8-206ENST00000523237 CEP120Q8N960 986 aa17.79■□□□□ 0.44
CLN8-206ENST00000523237 RIN2Q8WYP3 895 aaPredicted RBP17.79■□□□□ 0.44
CLN8-206ENST00000523237 PPP1R10Q96QC0 940 aaKnown RBP17.79■□□□□ 0.44
CLN8-206ENST00000523237 NPHP3-ACAD11A0A0J9YXS1 232 aa17.78■□□□□ 0.44
CLN8-206ENST00000523237 TOM1L1O75674 476 aa17.78■□□□□ 0.44
CLN8-206ENST00000523237 BRD1O95696 1058 aa17.78■□□□□ 0.44
CLN8-206ENST00000523237 MAPTP10636 758 aaKnown RBP17.78■□□□□ 0.44
CLN8-206ENST00000523237 OSTNP61366 133 aa17.78■□□□□ 0.44
CLN8-206ENST00000523237 ZXDAP98168 799 aa17.78■□□□□ 0.44
CLN8-206ENST00000523237 CACNB1Q02641 598 aaPredicted RBP17.78■□□□□ 0.44
CLN8-206ENST00000523237 RESTQ13127 1097 aa17.78■□□□□ 0.44
CLN8-206ENST00000523237 DHX8Q14562 1220 aaKnown RBP17.78■□□□□ 0.44
CLN8-206ENST00000523237 KARSQ15046 597 aaKnown RBP17.78■□□□□ 0.44
CLN8-206ENST00000523237 UROC1Q96N76 676 aa17.78■□□□□ 0.44
CLN8-206ENST00000523237 ACAP3Q96P50 834 aa17.78■□□□□ 0.44
CLN8-206ENST00000523237 REEP2Q9BRK0 252 aa17.78■□□□□ 0.44
CLN8-206ENST00000523237 TTPALQ9BTX7 342 aa17.78■□□□□ 0.44
CLN8-206ENST00000523237 CCSER1Q9C0I3 900 aa17.78■□□□□ 0.44
CLN8-206ENST00000523237 CLIC4Q9Y696 253 aa17.78■□□□□ 0.44
CLN8-206ENST00000523237 VWA8A3KMH1 1905 aa17.78■□□□□ 0.44
CLN8-206ENST00000523237 TRIOO75962 3097 aa17.78■□□□□ 0.44
CLN8-206ENST00000523237 PDCD11Q14690 1871 aaKnown RBP17.78■□□□□ 0.44
CLN8-206ENST00000523237 MYH15Q9Y2K3 1946 aa17.77■□□□□ 0.44
CLN8-206ENST00000523237 SMIM28A0A1B0GU29 152 aa17.77■□□□□ 0.44
CLN8-206ENST00000523237 C2CD4DB7Z1M9 353 aa17.77■□□□□ 0.44
CLN8-206ENST00000523237 TMEM189-UBE2V1I3L0A0 370 aa17.77■□□□□ 0.44
CLN8-206ENST00000523237 ABLIM1O14639 778 aa17.77■□□□□ 0.44
CLN8-206ENST00000523237 HARSP12081 509 aaKnown RBP17.77■□□□□ 0.44
CLN8-206ENST00000523237 NCKAP1LP55160 1127 aa17.77■□□□□ 0.44
CLN8-206ENST00000523237 MCM6Q14566 821 aa17.77■□□□□ 0.44
CLN8-206ENST00000523237 PTPAQ15257 358 aa17.77■□□□□ 0.44
CLN8-206ENST00000523237 PTPN21Q16825 1174 aa17.77■□□□□ 0.44
CLN8-206ENST00000523237 XKR4Q5GH76 650 aa17.77■□□□□ 0.44
CLN8-206ENST00000523237 RTP2Q5QGT7 225 aa17.77■□□□□ 0.44
CLN8-206ENST00000523237 FAM171A1Q5VUB5 890 aa17.77■□□□□ 0.44
CLN8-206ENST00000523237 PDXDC1Q6P996 788 aa17.77■□□□□ 0.44
CLN8-206ENST00000523237 ALKAL1Q6UXT8 129 aa17.77■□□□□ 0.44
CLN8-206ENST00000523237 ZPBP2Q6X784 338 aa17.77■□□□□ 0.44
CLN8-206ENST00000523237 CEP57Q86XR8 500 aa17.77■□□□□ 0.44
CLN8-206ENST00000523237 PALB2Q86YC2 1186 aa17.77■□□□□ 0.44
CLN8-206ENST00000523237 GLYCTKQ8IVS8 523 aa17.77■□□□□ 0.44
CLN8-206ENST00000523237 TDRD5Q8NAT2 981 aaKnown RBP17.77■□□□□ 0.44
CLN8-206ENST00000523237 CMASQ8NFW8 434 aaPredicted RBP17.77■□□□□ 0.44
CLN8-206ENST00000523237 HDAC7Q8WUI4 952 aa17.77■□□□□ 0.44
CLN8-206ENST00000523237 RAD54LQ92698 747 aa17.77■□□□□ 0.44
CLN8-206ENST00000523237 PLEKHA4Q9H4M7 779 aa17.77■□□□□ 0.44
CLN8-206ENST00000523237 FOXD4L1Q9NU39 408 aa17.77■□□□□ 0.44
CLN8-206ENST00000523237 BLOC1S4Q9NUP1 217 aa17.77■□□□□ 0.44
CLN8-206ENST00000523237 SLC38A7Q9NVC3 462 aa17.77■□□□□ 0.44
CLN8-206ENST00000523237 ANKFY1Q9P2R3 1169 aa17.77■□□□□ 0.44
CLN8-206ENST00000523237 USTQ9Y2C2 406 aa17.77■□□□□ 0.44
CLN8-206ENST00000523237 ARIH1Q9Y4X5 557 aaPredicted RBP17.77■□□□□ 0.44
CLN8-206ENST00000523237 CCDC195A0A1B0GUA6 201 aa17.76■□□□□ 0.43
CLN8-206ENST00000523237 TGM5O43548 720 aa17.76■□□□□ 0.43
CLN8-206ENST00000523237 B3GAT3O94766 335 aa17.76■□□□□ 0.43
CLN8-206ENST00000523237 FAM13AO94988 1023 aa17.76■□□□□ 0.43
CLN8-206ENST00000523237 KRT18P05783 430 aaKnown RBP17.76■□□□□ 0.43
CLN8-206ENST00000523237 RPL17P18621 184 aaKnown RBP17.76■□□□□ 0.43
CLN8-206ENST00000523237 SCP2P22307 547 aa17.76■□□□□ 0.43
CLN8-206ENST00000523237 CLCNKBP51801 687 aa17.76■□□□□ 0.43
CLN8-206ENST00000523237 NOLC1Q14978 699 aaKnown RBP eCLIP17.76■□□□□ 0.43
CLN8-206ENST00000523237 DCLRE1AQ6PJP8 1040 aa17.76■□□□□ 0.43
CLN8-206ENST00000523237 PRSS55Q6UWB4 352 aaPredicted RBP17.76■□□□□ 0.43
CLN8-206ENST00000523237 CYP26C1Q6V0L0 522 aa17.76■□□□□ 0.43
CLN8-206ENST00000523237 TRIM67Q6ZTA4 783 aa17.76■□□□□ 0.43
CLN8-206ENST00000523237 CCDC149Q6ZUS6 474 aa17.76■□□□□ 0.43
CLN8-206ENST00000523237 HAUS6Q7Z4H7 955 aa17.76■□□□□ 0.43
CLN8-206ENST00000523237 PLCD3Q8N3E9 789 aa17.76■□□□□ 0.43
CLN8-206ENST00000523237 LRRC15Q8TF66 581 aa17.76■□□□□ 0.43
CLN8-206ENST00000523237 PIK3R5Q8WYR1 880 aa17.76■□□□□ 0.43
CLN8-206ENST00000523237 LARP4BQ92615 738 aaKnown RBP17.76■□□□□ 0.43
CLN8-206ENST00000523237 BICD1Q96G01 975 aa17.76■□□□□ 0.43
CLN8-206ENST00000523237 ZBTB45Q96K62 511 aaPredicted RBP17.76■□□□□ 0.43
CLN8-206ENST00000523237 SNX27Q96L92 541 aa17.76■□□□□ 0.43
CLN8-206ENST00000523237 ZSCAN16Q9H4T2 348 aaPredicted RBP17.76■□□□□ 0.43
CLN8-206ENST00000523237 MYO10Q9HD67 2058 aa17.75■□□□□ 0.43
CLN8-206ENST00000523237 TECTAO75443 2155 aa17.75■□□□□ 0.43
CLN8-206ENST00000523237 CLDN3O15551 220 aa17.75■□□□□ 0.43
CLN8-206ENST00000523237 TRAPPC3O43617 180 aa17.75■□□□□ 0.43
CLN8-206ENST00000523237 SPATA31D3P0C874 917 aa17.75■□□□□ 0.43
CLN8-206ENST00000523237 MARCKSP29966 332 aaPredicted RBP17.75■□□□□ 0.43
CLN8-206ENST00000523237 MATR3P43243 847 aaKnown RBP eCLIP17.75■□□□□ 0.43
CLN8-206ENST00000523237 ZNF131P52739 623 aa17.75■□□□□ 0.43
CLN8-206ENST00000523237 SIGLEC14Q08ET2 396 aa17.75■□□□□ 0.43
CLN8-206ENST00000523237 PSMD5Q16401 504 aa17.75■□□□□ 0.43
CLN8-206ENST00000523237 UPP1Q16831 310 aa17.75■□□□□ 0.43
CLN8-206ENST00000523237 FAM173BQ6P4H8 233 aa17.75■□□□□ 0.43
CLN8-206ENST00000523237 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.75■□□□□ 0.43
CLN8-206ENST00000523237 SPATA31D4Q6ZUB0 917 aa17.75■□□□□ 0.43
CLN8-206ENST00000523237 HFE2Q6ZVN8 426 aa17.75■□□□□ 0.43
CLN8-206ENST00000523237 ZDHHC14Q8IZN3 488 aa17.75■□□□□ 0.43
CLN8-206ENST00000523237 MYCT1Q8N699 235 aa17.75■□□□□ 0.43
CLN8-206ENST00000523237 LNX1Q8TBB1 728 aaPredicted RBP17.75■□□□□ 0.43
CLN8-206ENST00000523237 FEZF2Q8TBJ5 459 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms