RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 PAX4O43316 350 aa7.46□□□□□ -1.22
CSMD1-211ENST00000523062 LGR5O75473 907 aa7.46□□□□□ -1.22
CSMD1-211ENST00000523062 SERPING1P05155 500 aa7.46□□□□□ -1.22
CSMD1-211ENST00000523062 EIF4A3P38919 411 aaKnown RBP7.46□□□□□ -1.22
CSMD1-211ENST00000523062 ARHGAP25P42331 645 aa7.46□□□□□ -1.22
CSMD1-211ENST00000523062 FMO5P49326 533 aa7.46□□□□□ -1.22
CSMD1-211ENST00000523062 STAT5BP51692 787 aa7.46□□□□□ -1.22
CSMD1-211ENST00000523062 KIF11P52732 1056 aa7.46□□□□□ -1.22
CSMD1-211ENST00000523062 POLR2FP61218 127 aaKnown RBP7.46□□□□□ -1.22
CSMD1-211ENST00000523062 MYL7Q01449 175 aa7.46□□□□□ -1.22
CSMD1-211ENST00000523062 BFSP1Q12934 665 aa7.46□□□□□ -1.22
CSMD1-211ENST00000523062 RAPGEF1Q13905 1077 aa7.46□□□□□ -1.22
CSMD1-211ENST00000523062 HSP90AA2PQ14568 343 aaPredicted RBP7.46□□□□□ -1.22
CSMD1-211ENST00000523062 TTLL4Q14679 1199 aa7.46□□□□□ -1.22
CSMD1-211ENST00000523062 ASIC2Q16515 512 aa7.46□□□□□ -1.22
CSMD1-211ENST00000523062 SLC9C1Q4G0N8 1177 aa7.46□□□□□ -1.22
CSMD1-211ENST00000523062 TDRD12Q587J7 1177 aaKnown RBP7.46□□□□□ -1.22
CSMD1-211ENST00000523062 CELF3Q5SZQ8 465 aaKnown RBP7.46□□□□□ -1.22
CSMD1-211ENST00000523062 KLHDC7AQ5VTJ3 777 aa7.46□□□□□ -1.22
CSMD1-211ENST00000523062 ARMCX2Q7L311 632 aa7.46□□□□□ -1.22
CSMD1-211ENST00000523062 EEPD1Q7L9B9 569 aa7.46□□□□□ -1.22
CSMD1-211ENST00000523062 KIAA1328Q86T90 577 aa7.46□□□□□ -1.22
CSMD1-211ENST00000523062 FMNL3Q8IVF7 1028 aa7.46□□□□□ -1.22
CSMD1-211ENST00000523062 FBXO16Q8IX29 292 aaPredicted RBP7.46□□□□□ -1.22
CSMD1-211ENST00000523062 DEPTORQ8TB45 409 aa7.46□□□□□ -1.22
CSMD1-211ENST00000523062 SCFD2Q8WU76 684 aa7.46□□□□□ -1.22
CSMD1-211ENST00000523062 SLC7A3Q8WY07 619 aa7.46□□□□□ -1.22
CSMD1-211ENST00000523062 BSNDQ8WZ55 320 aa7.46□□□□□ -1.22
CSMD1-211ENST00000523062 KCNN1Q92952 543 aa7.46□□□□□ -1.22
CSMD1-211ENST00000523062 JAKMIP2Q96AA8 810 aa7.46□□□□□ -1.22
CSMD1-211ENST00000523062 SPAG5Q96R06 1193 aa7.46□□□□□ -1.22
CSMD1-211ENST00000523062 PCYT2Q99447 389 aa7.46□□□□□ -1.22
CSMD1-211ENST00000523062 CBWD1Q9BRT8 395 aa7.46□□□□□ -1.22
CSMD1-211ENST00000523062 NTPCRQ9BSD7 190 aaKnown RBP7.46□□□□□ -1.22
CSMD1-211ENST00000523062 TSGA10Q9BZW7 698 aa7.46□□□□□ -1.22
CSMD1-211ENST00000523062 PORCNQ9H237 461 aa7.46□□□□□ -1.22
CSMD1-211ENST00000523062 IKZF4Q9H2S9 585 aa7.46□□□□□ -1.22
CSMD1-211ENST00000523062 R3HDMLQ9H3Y0 253 aa7.46□□□□□ -1.22
CSMD1-211ENST00000523062 DHX33Q9H6R0 707 aaKnown RBP7.46□□□□□ -1.22
CSMD1-211ENST00000523062 AZI2Q9H6S1 392 aa7.46□□□□□ -1.22
CSMD1-211ENST00000523062 EFCC1Q9HA90 598 aa7.46□□□□□ -1.22
CSMD1-211ENST00000523062 VTA1Q9NP79 307 aa7.46□□□□□ -1.22
CSMD1-211ENST00000523062 NLRC4Q9NPP4 1024 aa7.46□□□□□ -1.22
CSMD1-211ENST00000523062 LUC7LQ9NQ29 371 aaKnown RBP7.46□□□□□ -1.22
CSMD1-211ENST00000523062 NRBP2Q9NSY0 501 aa7.46□□□□□ -1.22
CSMD1-211ENST00000523062 DNAAF2Q9NVR5 837 aaKnown RBP7.46□□□□□ -1.22
CSMD1-211ENST00000523062 HSPBP1Q9NZL4 362 aa7.46□□□□□ -1.22
CSMD1-211ENST00000523062 ARHGAP28Q9P2N2 729 aa7.46□□□□□ -1.22
CSMD1-211ENST00000523062 DDX41Q9UJV9 622 aaKnown RBP7.46□□□□□ -1.22
CSMD1-211ENST00000523062 TBX20Q9UMR3 447 aa7.46□□□□□ -1.22
CSMD1-211ENST00000523062 REXO2Q9Y3B8 237 aaKnown RBP7.46□□□□□ -1.22
CSMD1-211ENST00000523062 TELO2Q9Y4R8 837 aa7.46□□□□□ -1.22
CSMD1-211ENST00000523062 PCDHGC4Q9Y5F7 938 aa7.46□□□□□ -1.22
CSMD1-211ENST00000523062 IVNS1ABPQ9Y6Y0 642 aa7.46□□□□□ -1.22
CSMD1-211ENST00000523062 EMSYQ7Z589 1322 aa7.46□□□□□ -1.22
CSMD1-211ENST00000523062 ARID1BQ8NFD5 2236 aaPredicted RBP7.46□□□□□ -1.22
CSMD1-211ENST00000523062 P4HA2O15460 535 aa7.45□□□□□ -1.22
CSMD1-211ENST00000523062 CTIFO43310 598 aaKnown RBP7.45□□□□□ -1.22
CSMD1-211ENST00000523062 KRT86O43790 486 aa7.45□□□□□ -1.22
CSMD1-211ENST00000523062 STRNO43815 780 aa7.45□□□□□ -1.22
CSMD1-211ENST00000523062 GAS2O43903 313 aaKnown RBP7.45□□□□□ -1.22
CSMD1-211ENST00000523062 AKR1B10O60218 316 aa7.45□□□□□ -1.22
CSMD1-211ENST00000523062 ARIH2O95376 493 aa7.45□□□□□ -1.22
CSMD1-211ENST00000523062 FBXO45P0C2W1 286 aa7.45□□□□□ -1.22
CSMD1-211ENST00000523062 TRIM49P0CI25 452 aa7.45□□□□□ -1.22
CSMD1-211ENST00000523062 TRIM49CP0CI26 452 aa7.45□□□□□ -1.22
CSMD1-211ENST00000523062 UCHL3P15374 230 aa7.45□□□□□ -1.22
CSMD1-211ENST00000523062 ATP4AP20648 1035 aa7.45□□□□□ -1.22
CSMD1-211ENST00000523062 RFX1P22670 979 aa7.45□□□□□ -1.22
CSMD1-211ENST00000523062 PON1P27169 355 aa7.45□□□□□ -1.22
CSMD1-211ENST00000523062 ANXA13P27216 316 aa7.45□□□□□ -1.22
CSMD1-211ENST00000523062 ADORA2AP29274 412 aa7.45□□□□□ -1.22
CSMD1-211ENST00000523062 TCF7P36402 384 aaPredicted RBP7.45□□□□□ -1.22
CSMD1-211ENST00000523062 NAMPTP43490 491 aa7.45□□□□□ -1.22
CSMD1-211ENST00000523062 VAMP7P51809 220 aa7.45□□□□□ -1.22
CSMD1-211ENST00000523062 VAV2P52735 878 aa7.45□□□□□ -1.22
CSMD1-211ENST00000523062 ENPEPQ07075 957 aa7.45□□□□□ -1.22
CSMD1-211ENST00000523062 CETN1Q12798 172 aa7.45□□□□□ -1.22
CSMD1-211ENST00000523062 TARBP2Q15633 366 aaKnown RBP7.45□□□□□ -1.22
CSMD1-211ENST00000523062 LY6KQ17RY6 165 aa7.45□□□□□ -1.22
CSMD1-211ENST00000523062 FAM110CQ1W6H9 321 aa7.45□□□□□ -1.22
CSMD1-211ENST00000523062 ZNF792Q3KQV3 632 aa7.45□□□□□ -1.22
CSMD1-211ENST00000523062 ZNF569Q5MCW4 686 aa7.45□□□□□ -1.22
CSMD1-211ENST00000523062 TMEM214Q6NUQ4 689 aaKnown RBP7.45□□□□□ -1.22
CSMD1-211ENST00000523062 CCDC62Q6P9F0 684 aa7.45□□□□□ -1.22
CSMD1-211ENST00000523062 DHX37Q8IY37 1157 aaKnown RBP7.45□□□□□ -1.22
CSMD1-211ENST00000523062 EXOC8Q8IYI6 725 aa7.45□□□□□ -1.22
CSMD1-211ENST00000523062 ANKRD13CQ8N6S4 541 aa7.45□□□□□ -1.22
CSMD1-211ENST00000523062 ERO1AQ96HE7 468 aa7.45□□□□□ -1.22
CSMD1-211ENST00000523062 SPATA33Q96N06 139 aa7.45□□□□□ -1.22
CSMD1-211ENST00000523062 WDR24Q96S15 920 aa7.45□□□□□ -1.22
CSMD1-211ENST00000523062 GPR20Q99678 358 aa7.45□□□□□ -1.22
CSMD1-211ENST00000523062 JPH2Q9BR39 696 aaPredicted RBP7.45□□□□□ -1.22
CSMD1-211ENST00000523062 KIFC3Q9BVG8 833 aa7.45□□□□□ -1.22
CSMD1-211ENST00000523062 ZCCHC2Q9C0B9 1178 aaKnown RBP7.45□□□□□ -1.22
CSMD1-211ENST00000523062 ARHGAP20Q9P2F6 1191 aa7.45□□□□□ -1.22
CSMD1-211ENST00000523062 DIS3Q9Y2L1 958 aaKnown RBP7.45□□□□□ -1.22
CSMD1-211ENST00000523062 FHOD1Q9Y613 1164 aa7.45□□□□□ -1.22
CSMD1-211ENST00000523062 DOCK5Q9H7D0 1870 aa7.45□□□□□ -1.22
CSMD1-211ENST00000523062 WDR81Q562E7 1941 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms