RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 THNSL1Q8IYQ7 743 aa14.17□□□□□ -0.14
CPNE3-205ENST00000522240 CEP120Q8N960 986 aa14.17□□□□□ -0.14
CPNE3-205ENST00000522240 PLEKHO2Q8TD55 490 aa14.17□□□□□ -0.14
CPNE3-205ENST00000522240 IQCDQ96DY2 449 aa14.17□□□□□ -0.14
CPNE3-205ENST00000522240 FNBP1Q96RU3 617 aa14.17□□□□□ -0.14
CPNE3-205ENST00000522240 CGRRF1Q99675 332 aa14.17□□□□□ -0.14
CPNE3-205ENST00000522240 CCDC94Q9BW85 323 aaPredicted RBP14.17□□□□□ -0.14
CPNE3-205ENST00000522240 TRAIPQ9BWF2 469 aa14.17□□□□□ -0.14
CPNE3-205ENST00000522240 AGO3Q9H9G7 860 aaKnown RBP14.17□□□□□ -0.14
CPNE3-205ENST00000522240 RPF1Q9H9Y2 349 aaKnown RBP14.17□□□□□ -0.14
CPNE3-205ENST00000522240 IMPACTQ9P2X3 320 aa14.17□□□□□ -0.14
CPNE3-205ENST00000522240 TBX21Q9UL17 535 aa14.17□□□□□ -0.14
CPNE3-205ENST00000522240 PADI3Q9ULW8 664 aa14.17□□□□□ -0.14
CPNE3-205ENST00000522240 COLQQ9Y215 455 aaPredicted RBP14.17□□□□□ -0.14
CPNE3-205ENST00000522240 ARIH1Q9Y4X5 557 aaPredicted RBP14.17□□□□□ -0.14
CPNE3-205ENST00000522240 SZT2Q5T011 3432 aa14.16□□□□□ -0.14
CPNE3-205ENST00000522240 GOLGA6L6A8MZA4 724 aa14.16□□□□□ -0.14
CPNE3-205ENST00000522240 STAG3L1P0CL83 205 aa14.16□□□□□ -0.14
CPNE3-205ENST00000522240 MXI1P50539 228 aa14.16□□□□□ -0.14
CPNE3-205ENST00000522240 RAB27AP51159 221 aa14.16□□□□□ -0.14
CPNE3-205ENST00000522240 AP3M2P53677 418 aa14.16□□□□□ -0.14
CPNE3-205ENST00000522240 MYL7Q01449 175 aa14.16□□□□□ -0.14
CPNE3-205ENST00000522240 DSC3Q14574 896 aa14.16□□□□□ -0.14
CPNE3-205ENST00000522240 MBTPS1Q14703 1052 aa14.16□□□□□ -0.14
CPNE3-205ENST00000522240 ENOX2Q16206 610 aaKnown RBP14.16□□□□□ -0.14
CPNE3-205ENST00000522240 TWF2Q6IBS0 349 aaKnown RBP14.16□□□□□ -0.14
CPNE3-205ENST00000522240 WDR49Q8IV35 697 aa14.16□□□□□ -0.14
CPNE3-205ENST00000522240 CD302Q8IX05 232 aa14.16□□□□□ -0.14
CPNE3-205ENST00000522240 EIF2AQ9BY44 585 aaKnown RBP14.16□□□□□ -0.14
CPNE3-205ENST00000522240 TRIM6Q9C030 488 aaPredicted RBP14.16□□□□□ -0.14
CPNE3-205ENST00000522240 HIPK3Q9H422 1215 aa14.16□□□□□ -0.14
CPNE3-205ENST00000522240 TMEM8AQ9HCN3 771 aa14.16□□□□□ -0.14
CPNE3-205ENST00000522240 ATP11BQ9Y2G3 1177 aa14.16□□□□□ -0.14
CPNE3-205ENST00000522240 SIK3Q9Y2K2 1263 aa14.16□□□□□ -0.14
CPNE3-205ENST00000522240 CLTBP09497 229 aa14.15□□□□□ -0.14
CPNE3-205ENST00000522240 CXCL8P10145 99 aa14.15□□□□□ -0.14
CPNE3-205ENST00000522240 ZSCAN20P17040 1043 aaPredicted RBP14.15□□□□□ -0.14
CPNE3-205ENST00000522240 DLG4P78352 724 aa14.15□□□□□ -0.14
CPNE3-205ENST00000522240 PPP3CAQ08209 521 aa14.15□□□□□ -0.14
CPNE3-205ENST00000522240 CETN1Q12798 172 aa14.15□□□□□ -0.14
CPNE3-205ENST00000522240 NFX1Q12986 1120 aaKnown RBP14.15□□□□□ -0.14
CPNE3-205ENST00000522240 CAMK2BQ13554 666 aa14.15□□□□□ -0.14
CPNE3-205ENST00000522240 SYCP1Q15431 976 aa14.15□□□□□ -0.14
CPNE3-205ENST00000522240 LRRC26Q2I0M4 334 aa14.15□□□□□ -0.14
CPNE3-205ENST00000522240 CBWD6Q4V339 395 aa14.15□□□□□ -0.14
CPNE3-205ENST00000522240 FIGNQ5HY92 759 aa14.15□□□□□ -0.14
CPNE3-205ENST00000522240 CBWD3Q5JTY5 395 aa14.15□□□□□ -0.14
CPNE3-205ENST00000522240 CBWD5Q5RIA9 395 aa14.15□□□□□ -0.14
CPNE3-205ENST00000522240 GBP6Q6ZN66 633 aa14.15□□□□□ -0.14
CPNE3-205ENST00000522240 TMC6Q7Z403 805 aa14.15□□□□□ -0.14
CPNE3-205ENST00000522240 NT5DC4Q86YG4 428 aa14.15□□□□□ -0.14
CPNE3-205ENST00000522240 DRC7Q8IY82 874 aa14.15□□□□□ -0.14
CPNE3-205ENST00000522240 HACE1Q8IYU2 909 aa14.15□□□□□ -0.14
CPNE3-205ENST00000522240 CCDC127Q96BQ5 260 aa14.15□□□□□ -0.14
CPNE3-205ENST00000522240 ACAP3Q96P50 834 aa14.15□□□□□ -0.14
CPNE3-205ENST00000522240 TSPAN18Q96SJ8 248 aa14.15□□□□□ -0.14
CPNE3-205ENST00000522240 FTHL17Q9BXU8 183 aa14.15□□□□□ -0.14
CPNE3-205ENST00000522240 IFIH1Q9BYX4 1025 aaKnown RBP14.15□□□□□ -0.14
CPNE3-205ENST00000522240 ASB7Q9H672 318 aa14.15□□□□□ -0.14
CPNE3-205ENST00000522240 PLEKHA5Q9HAU0 1116 aa14.15□□□□□ -0.14
CPNE3-205ENST00000522240 PDE11AQ9HCR9 933 aa14.15□□□□□ -0.14
CPNE3-205ENST00000522240 TOPORSQ9NS56 1045 aaPredicted RBP14.15□□□□□ -0.14
CPNE3-205ENST00000522240 DAAM1Q9Y4D1 1078 aa14.15□□□□□ -0.14
CPNE3-205ENST00000522240 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.15□□□□□ -0.14
CPNE3-205ENST00000522240 CITO14578 2027 aa14.15□□□□□ -0.14
CPNE3-205ENST00000522240 PDCD11Q14690 1871 aaKnown RBP14.14□□□□□ -0.15
CPNE3-205ENST00000522240 TTC26A0AVF1 554 aa14.14□□□□□ -0.15
CPNE3-205ENST00000522240 H0YGN5 161 aa14.14□□□□□ -0.15
CPNE3-205ENST00000522240 DLATP10515 647 aaKnown RBP14.14□□□□□ -0.15
CPNE3-205ENST00000522240 SKIP12755 728 aa14.14□□□□□ -0.15
CPNE3-205ENST00000522240 CLCN6P51797 869 aa14.14□□□□□ -0.15
CPNE3-205ENST00000522240 YARSP54577 528 aaKnown RBP14.14□□□□□ -0.15
CPNE3-205ENST00000522240 WNT7BP56706 349 aa14.14□□□□□ -0.15
CPNE3-205ENST00000522240 TBX2Q13207 712 aaPredicted RBP14.14□□□□□ -0.15
CPNE3-205ENST00000522240 EXOC3L4Q17RC7 722 aa14.14□□□□□ -0.15
CPNE3-205ENST00000522240 SEZ6Q53EL9 994 aa14.14□□□□□ -0.15
CPNE3-205ENST00000522240 KRT39Q6A163 491 aa14.14□□□□□ -0.15
CPNE3-205ENST00000522240 C15orf39Q6ZRI6 1047 aa14.14□□□□□ -0.15
CPNE3-205ENST00000522240 TMEM192Q8IY95 271 aa14.14□□□□□ -0.15
CPNE3-205ENST00000522240 APBB2Q92870 758 aa14.14□□□□□ -0.15
CPNE3-205ENST00000522240 SNX27Q96L92 541 aa14.14□□□□□ -0.15
CPNE3-205ENST00000522240 NUP58Q9BVL2 599 aa14.14□□□□□ -0.15
CPNE3-205ENST00000522240 OSBPL7Q9BZF2 842 aa14.14□□□□□ -0.15
CPNE3-205ENST00000522240 TMEM117Q9H0C3 514 aa14.14□□□□□ -0.15
CPNE3-205ENST00000522240 TMX1Q9H3N1 280 aa14.14□□□□□ -0.15
CPNE3-205ENST00000522240 NXF3Q9H4D5 531 aaKnown RBP14.14□□□□□ -0.15
CPNE3-205ENST00000522240 PLCB1Q9NQ66 1216 aa14.14□□□□□ -0.15
CPNE3-205ENST00000522240 FAM105AQ9NUU6 356 aa14.14□□□□□ -0.15
CPNE3-205ENST00000522240 GCNT4Q9P109 453 aa14.14□□□□□ -0.15
CPNE3-205ENST00000522240 DERAQ9Y315 318 aa14.14□□□□□ -0.15
CPNE3-205ENST00000522240 COQ4Q9Y3A0 265 aa14.14□□□□□ -0.15
CPNE3-205ENST00000522240 RECQL4O94761 1208 aa14.13□□□□□ -0.15
CPNE3-205ENST00000522240 CXCL10P02778 98 aa14.13□□□□□ -0.15
CPNE3-205ENST00000522240 TNNI1P19237 187 aa14.13□□□□□ -0.15
CPNE3-205ENST00000522240 RFC2P35250 354 aa14.13□□□□□ -0.15
CPNE3-205ENST00000522240 GCLMP48507 274 aa14.13□□□□□ -0.15
CPNE3-205ENST00000522240 GSDMDP57764 484 aa14.13□□□□□ -0.15
CPNE3-205ENST00000522240 OSTNP61366 133 aa14.13□□□□□ -0.15
CPNE3-205ENST00000522240 SLC10A6Q3KNW5 377 aa14.13□□□□□ -0.15
CPNE3-205ENST00000522240 ZACNQ401N2 412 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms