RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 SLC27A2O14975 620 aa8.23□□□□□ -1.09
CTNNA1-227ENST00000521387 CCL16O15467 120 aa8.23□□□□□ -1.09
CTNNA1-227ENST00000521387 ORC4O43929 436 aa8.23□□□□□ -1.09
CTNNA1-227ENST00000521387 VTNP04004 478 aa8.23□□□□□ -1.09
CTNNA1-227ENST00000521387 ZSCAN20P17040 1043 aaPredicted RBP8.23□□□□□ -1.09
CTNNA1-227ENST00000521387 RPL17P18621 184 aaKnown RBP8.23□□□□□ -1.09
CTNNA1-227ENST00000521387 FGFR4P22455 802 aa8.23□□□□□ -1.09
CTNNA1-227ENST00000521387 SOX9P48436 509 aa8.23□□□□□ -1.09
CTNNA1-227ENST00000521387 CSRP3P50461 194 aa8.23□□□□□ -1.09
CTNNA1-227ENST00000521387 DSG1Q02413 1049 aa8.23□□□□□ -1.09
CTNNA1-227ENST00000521387 SLC5A9Q2M3M2 681 aa8.23□□□□□ -1.09
CTNNA1-227ENST00000521387 NOMO2Q5JPE7 1267 aa8.23□□□□□ -1.09
CTNNA1-227ENST00000521387 C6orf132Q5T0Z8 1188 aa8.23□□□□□ -1.09
CTNNA1-227ENST00000521387 GPATCH4Q5T3I0 446 aaKnown RBP8.23□□□□□ -1.09
CTNNA1-227ENST00000521387 ZSCAN25Q6NSZ9 544 aa8.23□□□□□ -1.09
CTNNA1-227ENST00000521387 PDXDC2PQ6P474 469 aa8.23□□□□□ -1.09
CTNNA1-227ENST00000521387 ELMSAN1Q6PJG2 1045 aa8.23□□□□□ -1.09
CTNNA1-227ENST00000521387 ZNF589Q86UQ0 364 aaPredicted RBP8.23□□□□□ -1.09
CTNNA1-227ENST00000521387 GLYCTKQ8IVS8 523 aa8.23□□□□□ -1.09
CTNNA1-227ENST00000521387 ZNF516Q92618 1163 aa8.23□□□□□ -1.09
CTNNA1-227ENST00000521387 B3GALT6Q96L58 329 aa8.23□□□□□ -1.09
CTNNA1-227ENST00000521387 JAKMIP1Q96N16 626 aaKnown RBP8.23□□□□□ -1.09
CTNNA1-227ENST00000521387 SEC62Q99442 399 aaKnown RBP8.23□□□□□ -1.09
CTNNA1-227ENST00000521387 TM6SF1Q9BZW5 370 aa8.23□□□□□ -1.09
CTNNA1-227ENST00000521387 VAT1LQ9HCJ6 419 aa8.23□□□□□ -1.09
CTNNA1-227ENST00000521387 CHST7Q9NS84 486 aa8.23□□□□□ -1.09
CTNNA1-227ENST00000521387 MBD1Q9UIS9 605 aaPredicted RBP8.23□□□□□ -1.09
CTNNA1-227ENST00000521387 DNMT3LQ9UJW3 386 aa8.23□□□□□ -1.09
CTNNA1-227ENST00000521387 USP9YO00507 2555 aaPredicted RBP8.23□□□□□ -1.09
CTNNA1-227ENST00000521387 EVPLQ92817 2033 aa8.23□□□□□ -1.09
CTNNA1-227ENST00000521387 PTPRBP23467 1997 aa8.22□□□□□ -1.09
CTNNA1-227ENST00000521387 TRABD2BA6NFA1 517 aa8.22□□□□□ -1.09
CTNNA1-227ENST00000521387 CAPN8A6NHC0 703 aa8.22□□□□□ -1.09
CTNNA1-227ENST00000521387 STAM2O75886 525 aa8.22□□□□□ -1.09
CTNNA1-227ENST00000521387 LARGE1O95461 756 aa8.22□□□□□ -1.09
CTNNA1-227ENST00000521387 SLC3A2P08195 630 aaKnown RBP8.22□□□□□ -1.09
CTNNA1-227ENST00000521387 GNAT2P19087 354 aa8.22□□□□□ -1.09
CTNNA1-227ENST00000521387 PTMSP20962 102 aa8.22□□□□□ -1.09
CTNNA1-227ENST00000521387 RDXP35241 583 aaKnown RBP8.22□□□□□ -1.09
CTNNA1-227ENST00000521387 MAPK8P45983 427 aa8.22□□□□□ -1.09
CTNNA1-227ENST00000521387 GLUD2P49448 558 aa8.22□□□□□ -1.09
CTNNA1-227ENST00000521387 CAMK2BQ13554 666 aa8.22□□□□□ -1.09
CTNNA1-227ENST00000521387 CCINQ13939 588 aa8.22□□□□□ -1.09
CTNNA1-227ENST00000521387 LRRC32Q14392 662 aa8.22□□□□□ -1.09
CTNNA1-227ENST00000521387 SKOR2Q2VWA4 1001 aaPredicted RBP8.22□□□□□ -1.09
CTNNA1-227ENST00000521387 FOXD4L5Q5VV16 416 aaPredicted RBP8.22□□□□□ -1.09
CTNNA1-227ENST00000521387 MCTP1Q6DN14 999 aa8.22□□□□□ -1.09
CTNNA1-227ENST00000521387 SLCO6A1Q86UG4 719 aa8.22□□□□□ -1.09
CTNNA1-227ENST00000521387 SPIRE2Q8WWL2 714 aa8.22□□□□□ -1.09
CTNNA1-227ENST00000521387 FOXD4L4Q8WXT5 416 aaPredicted RBP8.22□□□□□ -1.09
CTNNA1-227ENST00000521387 CAMK1GQ96NX5 476 aa8.22□□□□□ -1.09
CTNNA1-227ENST00000521387 MTRQ99707 1265 aa8.22□□□□□ -1.09
CTNNA1-227ENST00000521387 TRMT61BQ9BVS5 477 aaKnown RBP8.22□□□□□ -1.09
CTNNA1-227ENST00000521387 PDRG1Q9NUG6 133 aa8.22□□□□□ -1.09
CTNNA1-227ENST00000521387 LMBRD1Q9NUN5 540 aa8.22□□□□□ -1.09
CTNNA1-227ENST00000521387 ANKMY1Q9P2S6 941 aa8.22□□□□□ -1.09
CTNNA1-227ENST00000521387 FBXW11Q9UKB1 542 aa8.22□□□□□ -1.09
CTNNA1-227ENST00000521387 KCNH3Q9ULD8 1083 aa8.22□□□□□ -1.09
CTNNA1-227ENST00000521387 LIMCH1Q9UPQ0 1083 aa8.22□□□□□ -1.09
CTNNA1-227ENST00000521387 INPP5FQ9Y2H2 1132 aa8.22□□□□□ -1.09
CTNNA1-227ENST00000521387 TAF6LQ9Y6J9 622 aa8.22□□□□□ -1.09
CTNNA1-227ENST00000521387 V9GY48 417 aaPredicted RBP8.22□□□□□ -1.09
CTNNA1-227ENST00000521387 ZFHX3Q15911 3703 aa8.21□□□□□ -1.09
CTNNA1-227ENST00000521387 POLQO75417 2590 aa8.21□□□□□ -1.09
CTNNA1-227ENST00000521387 CARNS1A5YM72 827 aa8.21□□□□□ -1.1
CTNNA1-227ENST00000521387 ENO4A6NNW6 628 aa8.21□□□□□ -1.1
CTNNA1-227ENST00000521387 RHOBTB1O94844 696 aa8.21□□□□□ -1.1
CTNNA1-227ENST00000521387 ALDH2P05091 517 aa8.21□□□□□ -1.1
CTNNA1-227ENST00000521387 HNRNPA1P09651 372 aaKnown RBP eCLIP8.21□□□□□ -1.1
CTNNA1-227ENST00000521387 FTH1P19P0C7X4 201 aa8.21□□□□□ -1.1
CTNNA1-227ENST00000521387 GP1BBP13224 206 aa8.21□□□□□ -1.1
CTNNA1-227ENST00000521387 CD59P13987 128 aa8.21□□□□□ -1.1
CTNNA1-227ENST00000521387 CEBPBP17676 345 aa8.21□□□□□ -1.1
CTNNA1-227ENST00000521387 POU3F2P20265 443 aaPredicted RBP8.21□□□□□ -1.1
CTNNA1-227ENST00000521387 GDI1P31150 447 aa8.21□□□□□ -1.1
CTNNA1-227ENST00000521387 PHKA2P46019 1235 aa8.21□□□□□ -1.1
CTNNA1-227ENST00000521387 MLLT6P55198 1093 aaPredicted RBP8.21□□□□□ -1.1
CTNNA1-227ENST00000521387 RIPPLY3P57055 190 aa8.21□□□□□ -1.1
CTNNA1-227ENST00000521387 ELF2Q15723 593 aa8.21□□□□□ -1.1
CTNNA1-227ENST00000521387 SLC35G1Q2M3R5 365 aa8.21□□□□□ -1.1
CTNNA1-227ENST00000521387 FAM78AQ5JUQ0 283 aa8.21□□□□□ -1.1
CTNNA1-227ENST00000521387 DGKKQ5KSL6 1271 aa8.21□□□□□ -1.1
CTNNA1-227ENST00000521387 VPS53Q5VIR6 699 aa8.21□□□□□ -1.1
CTNNA1-227ENST00000521387 VITQ6UXI7 678 aa8.21□□□□□ -1.1
CTNNA1-227ENST00000521387 FMNL3Q8IVF7 1028 aa8.21□□□□□ -1.1
CTNNA1-227ENST00000521387 SAMD3Q8N6K7 520 aa8.21□□□□□ -1.1
CTNNA1-227ENST00000521387 KBTBD3Q8NAB2 608 aa8.21□□□□□ -1.1
CTNNA1-227ENST00000521387 IRF7Q92985 503 aa8.21□□□□□ -1.1
CTNNA1-227ENST00000521387 MTMR8Q96EF0 704 aa8.21□□□□□ -1.1
CTNNA1-227ENST00000521387 ZNF668Q96K58 619 aaPredicted RBP8.21□□□□□ -1.1
CTNNA1-227ENST00000521387 FCRL3Q96P31 734 aaPredicted RBP8.21□□□□□ -1.1
CTNNA1-227ENST00000521387 NAPBQ9H115 298 aa8.21□□□□□ -1.1
CTNNA1-227ENST00000521387 FSCN3Q9NQT6 498 aa8.21□□□□□ -1.1
CTNNA1-227ENST00000521387 GDE1Q9NZC3 331 aa8.21□□□□□ -1.1
CTNNA1-227ENST00000521387 STK39Q9UEW8 545 aa8.21□□□□□ -1.1
CTNNA1-227ENST00000521387 EVLQ9UI08 416 aaPredicted RBP8.21□□□□□ -1.1
CTNNA1-227ENST00000521387 SSX2IPQ9Y2D8 614 aa8.21□□□□□ -1.1
CTNNA1-227ENST00000521387 FAN1Q9Y2M0 1017 aa8.21□□□□□ -1.1
CTNNA1-227ENST00000521387 CYP46A1Q9Y6A2 500 aa8.21□□□□□ -1.1
CTNNA1-227ENST00000521387 PI4KAP42356 2102 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms