RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 SF3B1O75533 1304 aaKnown RBP eCLIP18.7■□□□□ 0.587e-12■■■■■ 77.5
SQLE-205ENST00000521232 SMIM28A0A1B0GU29 152 aa18.69■□□□□ 0.58
SQLE-205ENST00000521232 PRR33A8MZF0 331 aa18.69■□□□□ 0.58
SQLE-205ENST00000521232 H0YCG3 227 aa18.69■□□□□ 0.58
SQLE-205ENST00000521232 STX6O43752 255 aa18.69■□□□□ 0.58
SQLE-205ENST00000521232 TOM1L1O75674 476 aa18.69■□□□□ 0.58
SQLE-205ENST00000521232 KIF4AO95239 1232 aa18.69■□□□□ 0.58
SQLE-205ENST00000521232 MARCKSP29966 332 aaPredicted RBP18.69■□□□□ 0.58
SQLE-205ENST00000521232 DDIT3P35638 169 aa18.69■□□□□ 0.58
SQLE-205ENST00000521232 YARSP54577 528 aaKnown RBP18.69■□□□□ 0.58
SQLE-205ENST00000521232 MCM6Q14566 821 aa18.69■□□□□ 0.58
SQLE-205ENST00000521232 ZPBP2Q6X784 338 aa18.69■□□□□ 0.58
SQLE-205ENST00000521232 GPR149Q86SP6 731 aa18.69■□□□□ 0.58
SQLE-205ENST00000521232 ZBTB33Q86T24 672 aa18.69■□□□□ 0.58
SQLE-205ENST00000521232 GPBP1Q86WP2 473 aa18.69■□□□□ 0.58
SQLE-205ENST00000521232 EPSTI1Q96J88 318 aa18.69■□□□□ 0.58
SQLE-205ENST00000521232 ZBTB45Q96K62 511 aaPredicted RBP18.69■□□□□ 0.58
SQLE-205ENST00000521232 B3GALT6Q96L58 329 aa18.69■□□□□ 0.58
SQLE-205ENST00000521232 REEP2Q9BRK0 252 aa18.69■□□□□ 0.58
SQLE-205ENST00000521232 SFXN1Q9H9B4 322 aa18.69■□□□□ 0.58
SQLE-205ENST00000521232 TOPORSQ9NS56 1045 aaPredicted RBP18.69■□□□□ 0.58
SQLE-205ENST00000521232 FBXO2Q9UK22 296 aaPredicted RBP18.69■□□□□ 0.58
SQLE-205ENST00000521232 NR2E1Q9Y466 385 aa18.69■□□□□ 0.58
SQLE-205ENST00000521232 CITO14578 2027 aa18.69■□□□□ 0.58
SQLE-205ENST00000521232 WEE2P0C1S8 567 aa18.68■□□□□ 0.58
SQLE-205ENST00000521232 SCP2P22307 547 aa18.68■□□□□ 0.58
SQLE-205ENST00000521232 ZNF131P52739 623 aa18.68■□□□□ 0.58
SQLE-205ENST00000521232 OSTNP61366 133 aa18.68■□□□□ 0.58
SQLE-205ENST00000521232 DHX8Q14562 1220 aaKnown RBP18.68■□□□□ 0.58
SQLE-205ENST00000521232 GLRA4Q5JXX5 417 aa18.68■□□□□ 0.58
SQLE-205ENST00000521232 RTP2Q5QGT7 225 aa18.68■□□□□ 0.58
SQLE-205ENST00000521232 DCLRE1AQ6PJP8 1040 aa18.68■□□□□ 0.58
SQLE-205ENST00000521232 TMC5Q6UXY8 1006 aa18.68■□□□□ 0.58
SQLE-205ENST00000521232 USP49Q70CQ1 688 aa18.68■□□□□ 0.58
SQLE-205ENST00000521232 HAUS6Q7Z4H7 955 aa18.68■□□□□ 0.58
SQLE-205ENST00000521232 CMASQ8NFW8 434 aaPredicted RBP18.68■□□□□ 0.58
SQLE-205ENST00000521232 RASSF8Q8NHQ8 419 aa18.68■□□□□ 0.58
SQLE-205ENST00000521232 HDAC7Q8WUI4 952 aa18.68■□□□□ 0.58
SQLE-205ENST00000521232 RIN2Q8WYP3 895 aaPredicted RBP18.68■□□□□ 0.58
SQLE-205ENST00000521232 EDAQ92838 391 aa18.68■□□□□ 0.58
SQLE-205ENST00000521232 UROC1Q96N76 676 aa18.68■□□□□ 0.58
SQLE-205ENST00000521232 ACAP3Q96P50 834 aa18.68■□□□□ 0.58
SQLE-205ENST00000521232 DPP7Q9UHL4 492 aa18.68■□□□□ 0.58
SQLE-205ENST00000521232 PLXNA3P51805 1871 aa18.68■□□□□ 0.58
SQLE-205ENST00000521232 TECTAO75443 2155 aa18.68■□□□□ 0.58
SQLE-205ENST00000521232 TMEM189-UBE2V1I3L0A0 370 aa18.67■□□□□ 0.58
SQLE-205ENST00000521232 GLUD1P00367 558 aa18.67■□□□□ 0.58
SQLE-205ENST00000521232 KCNE1P15382 129 aa18.67■□□□□ 0.58
SQLE-205ENST00000521232 CREMQ03060 361 aa18.67■□□□□ 0.58
SQLE-205ENST00000521232 ELAVL2Q12926 359 aaKnown RBP18.67■□□□□ 0.58
SQLE-205ENST00000521232 SLC39A14Q15043 492 aa18.67■□□□□ 0.58
SQLE-205ENST00000521232 UPP1Q16831 310 aa18.67■□□□□ 0.58
SQLE-205ENST00000521232 SPECC1Q5M775 1068 aa18.67■□□□□ 0.58
SQLE-205ENST00000521232 FAM171A1Q5VUB5 890 aa18.67■□□□□ 0.58
SQLE-205ENST00000521232 LILRA6Q6PI73 481 aa18.67■□□□□ 0.58
SQLE-205ENST00000521232 C15orf39Q6ZRI6 1047 aa18.67■□□□□ 0.58
SQLE-205ENST00000521232 MYCT1Q8N699 235 aa18.67■□□□□ 0.58
SQLE-205ENST00000521232 FEZF2Q8TBJ5 459 aa18.67■□□□□ 0.58
SQLE-205ENST00000521232 HASPINQ8TF76 798 aa18.67■□□□□ 0.58
SQLE-205ENST00000521232 LARP4BQ92615 738 aaKnown RBP18.67■□□□□ 0.58
SQLE-205ENST00000521232 TTPALQ9BTX7 342 aa18.67■□□□□ 0.58
SQLE-205ENST00000521232 PARVGQ9HBI0 331 aa18.67■□□□□ 0.58
SQLE-205ENST00000521232 CLDN3O15551 220 aa18.66■□□□□ 0.58
SQLE-205ENST00000521232 PAPLNO95428 1278 aa18.66■□□□□ 0.58
SQLE-205ENST00000521232 CLCNKBP51801 687 aa18.66■□□□□ 0.58
SQLE-205ENST00000521232 CEBPZQ03701 1054 aaKnown RBP18.66■□□□□ 0.58
SQLE-205ENST00000521232 MCL1Q07820 350 aa18.66■□□□□ 0.58
SQLE-205ENST00000521232 ELMSAN1Q6PJG2 1045 aa18.66■□□□□ 0.58
SQLE-205ENST00000521232 CD300LGQ6UXG3 332 aa18.66■□□□□ 0.58
SQLE-205ENST00000521232 PALB2Q86YC2 1186 aa18.66■□□□□ 0.58
SQLE-205ENST00000521232 LNX1Q8TBB1 728 aaPredicted RBP18.66■□□□□ 0.58
SQLE-205ENST00000521232 PIK3R5Q8WYR1 880 aa18.66■□□□□ 0.58
SQLE-205ENST00000521232 SNX27Q96L92 541 aa18.66■□□□□ 0.58
SQLE-205ENST00000521232 ZMAT2Q96NC0 199 aaKnown RBP18.66■□□□□ 0.58
SQLE-205ENST00000521232 CLIC6Q96NY7 704 aa18.66■□□□□ 0.58
SQLE-205ENST00000521232 USP28Q96RU2 1077 aa18.66■□□□□ 0.58
SQLE-205ENST00000521232 RHOBTB2Q9BYZ6 727 aa18.66■□□□□ 0.58
SQLE-205ENST00000521232 PLEKHA4Q9H4M7 779 aa18.66■□□□□ 0.58
SQLE-205ENST00000521232 MAN1C1Q9NR34 630 aa18.66■□□□□ 0.58
SQLE-205ENST00000521232 SLC38A7Q9NVC3 462 aa18.66■□□□□ 0.58
SQLE-205ENST00000521232 CNTN3Q9P232 1028 aa18.66■□□□□ 0.58
SQLE-205ENST00000521232 CCDC39Q9UFE4 941 aa18.66■□□□□ 0.58
SQLE-205ENST00000521232 RAPGEFL1Q9UHV5 662 aa18.66■□□□□ 0.58
SQLE-205ENST00000521232 USTQ9Y2C2 406 aa18.66■□□□□ 0.58
SQLE-205ENST00000521232 VWA8A3KMH1 1905 aa18.66■□□□□ 0.58
SQLE-205ENST00000521232 C2orf16Q68DN1 1984 aa18.65■□□□□ 0.58
SQLE-205ENST00000521232 SPDYE4A6NLX3 237 aa18.65■□□□□ 0.58
SQLE-205ENST00000521232 MEFVO15553 781 aaPredicted RBP18.65■□□□□ 0.58
SQLE-205ENST00000521232 TGM5O43548 720 aa18.65■□□□□ 0.58
SQLE-205ENST00000521232 TRAK2O60296 914 aa18.65■□□□□ 0.58
SQLE-205ENST00000521232 B3GAT3O94766 335 aa18.65■□□□□ 0.58
SQLE-205ENST00000521232 FAM13AO94988 1023 aa18.65■□□□□ 0.58
SQLE-205ENST00000521232 IGFBP6P24592 240 aaPredicted RBP18.65■□□□□ 0.58
SQLE-205ENST00000521232 ZXDAP98168 799 aa18.65■□□□□ 0.58
SQLE-205ENST00000521232 NOLC1Q14978 699 aaKnown RBP eCLIP18.65■□□□□ 0.58
SQLE-205ENST00000521232 PRSS55Q6UWB4 352 aaPredicted RBP18.65■□□□□ 0.58
SQLE-205ENST00000521232 CYP26C1Q6V0L0 522 aa18.65■□□□□ 0.58
SQLE-205ENST00000521232 DDX27Q96GQ7 796 aaKnown RBP18.65■□□□□ 0.58
SQLE-205ENST00000521232 FIZ1Q96SL8 496 aa18.65■□□□□ 0.58
SQLE-205ENST00000521232 HAPLN2Q9GZV7 340 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms