RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 LACTBL1A8MY62 500 aa19.33■□□□□ 0.68
SDC2-205ENST00000520233 H0YGN5 161 aa19.33■□□□□ 0.68
SDC2-205ENST00000520233 GOLGA6L19H0YKK7 550 aa19.33■□□□□ 0.68
SDC2-205ENST00000520233 HOXA2O43364 376 aa19.33■□□□□ 0.68
SDC2-205ENST00000520233 KRT13P13646 458 aa19.33■□□□□ 0.68
SDC2-205ENST00000520233 IBSPP21815 317 aaPredicted RBP19.33■□□□□ 0.68
SDC2-205ENST00000520233 TPM4P67936 248 aa19.33■□□□□ 0.68
SDC2-205ENST00000520233 PPP2R3AQ06190 1150 aa19.33■□□□□ 0.68
SDC2-205ENST00000520233 XKR4Q5GH76 650 aa19.33■□□□□ 0.68
SDC2-205ENST00000520233 TMC2Q8TDI7 906 aa19.33■□□□□ 0.68
SDC2-205ENST00000520233 TOP1MTQ969P6 601 aa19.33■□□□□ 0.68
SDC2-205ENST00000520233 CNOT6LQ96LI5 555 aaKnown RBP19.33■□□□□ 0.68
SDC2-205ENST00000520233 GDF15Q99988 308 aa19.33■□□□□ 0.68
SDC2-205ENST00000520233 HSD3B7Q9H2F3 369 aa19.33■□□□□ 0.68
SDC2-205ENST00000520233 MTIF3Q9H2K0 278 aaKnown RBP19.33■□□□□ 0.68
SDC2-205ENST00000520233 CNTN3Q9P232 1028 aa19.33■□□□□ 0.68
SDC2-205ENST00000520233 MAGEC2Q9UBF1 373 aaPredicted RBP19.33■□□□□ 0.68
SDC2-205ENST00000520233 ARMCX3Q9UH62 379 aaPredicted RBP19.33■□□□□ 0.68
SDC2-205ENST00000520233 MICAL3Q7RTP6 2002 aa19.33■□□□□ 0.68
SDC2-205ENST00000520233 KCNJ18B7U540 433 aa19.32■□□□□ 0.68
SDC2-205ENST00000520233 INPPL1O15357 1258 aa19.32■□□□□ 0.68
SDC2-205ENST00000520233 ZNF18P17022 549 aa19.32■□□□□ 0.68
SDC2-205ENST00000520233 EEF1GP26641 437 aaKnown RBP19.32■□□□□ 0.68
SDC2-205ENST00000520233 VAMP7P51809 220 aa19.32■□□□□ 0.68
SDC2-205ENST00000520233 DEFB103AP81534 67 aa19.32■□□□□ 0.68
SDC2-205ENST00000520233 BFSP1Q12934 665 aa19.32■□□□□ 0.68
SDC2-205ENST00000520233 KCNJ12Q14500 433 aa19.32■□□□□ 0.68
SDC2-205ENST00000520233 USP37Q86T82 979 aa19.32■□□□□ 0.68
SDC2-205ENST00000520233 RNF214Q8ND24 703 aa19.32■□□□□ 0.68
SDC2-205ENST00000520233 PARD3BQ8TEW8 1205 aa19.32■□□□□ 0.68
SDC2-205ENST00000520233 RSPH1Q8WYR4 309 aa19.32■□□□□ 0.68
SDC2-205ENST00000520233 FAM212AQ96EL1 285 aa19.32■□□□□ 0.68
SDC2-205ENST00000520233 TSPAN18Q96SJ8 248 aa19.32■□□□□ 0.68
SDC2-205ENST00000520233 PDE11AQ9HCR9 933 aa19.32■□□□□ 0.68
SDC2-205ENST00000520233 RNF19AQ9NV58 838 aa19.32■□□□□ 0.68
SDC2-205ENST00000520233 KLK14Q9P0G3 267 aa19.32■□□□□ 0.68
SDC2-205ENST00000520233 ARL5CA6NH57 179 aa19.31■□□□□ 0.68
SDC2-205ENST00000520233 OFD1O75665 1012 aa19.31■□□□□ 0.68
SDC2-205ENST00000520233 FGFR1P11362 822 aa19.31■□□□□ 0.68
SDC2-205ENST00000520233 KCNE1P15382 129 aa19.31■□□□□ 0.68
SDC2-205ENST00000520233 MLH1P40692 756 aa19.31■□□□□ 0.68
SDC2-205ENST00000520233 WNT7BP56706 349 aa19.31■□□□□ 0.68
SDC2-205ENST00000520233 SPAG1Q07617 926 aa19.31■□□□□ 0.68
SDC2-205ENST00000520233 HSP90AA4PQ58FG1 418 aa19.31■□□□□ 0.68
SDC2-205ENST00000520233 TCP11X2Q5H9J9 407 aa19.31■□□□□ 0.68
SDC2-205ENST00000520233 CLLU1OSQ5K130 101 aa19.31■□□□□ 0.68
SDC2-205ENST00000520233 RASIP1Q5U651 963 aa19.31■□□□□ 0.68
SDC2-205ENST00000520233 GLB1LQ6UWU2 654 aa19.31■□□□□ 0.68
SDC2-205ENST00000520233 TRIM59Q8IWR1 403 aa19.31■□□□□ 0.68
SDC2-205ENST00000520233 PLEKHO2Q8TD55 490 aa19.31■□□□□ 0.68
SDC2-205ENST00000520233 FNBP1Q96RU3 617 aa19.31■□□□□ 0.68
SDC2-205ENST00000520233 RPS6KC1Q96S38 1066 aa19.31■□□□□ 0.68
SDC2-205ENST00000520233 GAD1Q99259 594 aa19.31■□□□□ 0.68
SDC2-205ENST00000520233 RBSNQ9H1K0 784 aa19.31■□□□□ 0.68
SDC2-205ENST00000520233 CXXC1Q9P0U4 656 aaPredicted RBP19.31■□□□□ 0.68
SDC2-205ENST00000520233 DERAQ9Y315 318 aa19.31■□□□□ 0.68
SDC2-205ENST00000520233 SLC4A7Q9Y6M7 1214 aa19.31■□□□□ 0.68
SDC2-205ENST00000520233 UPP2O95045 317 aa19.3■□□□□ 0.68
SDC2-205ENST00000520233 CLDN10P78369 228 aa19.3■□□□□ 0.68
SDC2-205ENST00000520233 NT5DC4Q86YG4 428 aa19.3■□□□□ 0.68
SDC2-205ENST00000520233 CREBRFQ8IUR6 639 aa19.3■□□□□ 0.68
SDC2-205ENST00000520233 GSTCDQ8NEC7 633 aa19.3■□□□□ 0.68
SDC2-205ENST00000520233 PHOSPHO2Q8TCD6 241 aa19.3■□□□□ 0.68
SDC2-205ENST00000520233 HELQQ8TDG4 1101 aa19.3■□□□□ 0.68
SDC2-205ENST00000520233 CCDC127Q96BQ5 260 aa19.3■□□□□ 0.68
SDC2-205ENST00000520233 ZFP42Q96MM3 310 aa19.3■□□□□ 0.68
SDC2-205ENST00000520233 SLC9A7Q96T83 725 aa19.3■□□□□ 0.68
SDC2-205ENST00000520233 CGRRF1Q99675 332 aa19.3■□□□□ 0.68
SDC2-205ENST00000520233 UBE2OQ9C0C9 1292 aaKnown RBP19.3■□□□□ 0.68
SDC2-205ENST00000520233 CXCL16Q9H2A7 254 aa19.3■□□□□ 0.68
SDC2-205ENST00000520233 MKI67P46013 3256 aaKnown RBP19.3■□□□□ 0.68
SDC2-205ENST00000520233 TTC3P53804 2025 aa19.3■□□□□ 0.68
SDC2-205ENST00000520233 SMIM28A0A1B0GU29 152 aa19.29■□□□□ 0.68
SDC2-205ENST00000520233 LRRIQ3A6PVS8 624 aaPredicted RBP19.29■□□□□ 0.68
SDC2-205ENST00000520233 PTGESO14684 152 aa19.29■□□□□ 0.68
SDC2-205ENST00000520233 DGKIO75912 1065 aa19.29■□□□□ 0.68
SDC2-205ENST00000520233 CDK11BP21127 795 aaKnown RBP19.29■□□□□ 0.68
SDC2-205ENST00000520233 MTIF2P46199 727 aaKnown RBP19.29■□□□□ 0.68
SDC2-205ENST00000520233 DLG4P78352 724 aa19.29■□□□□ 0.68
SDC2-205ENST00000520233 C9orf50Q5SZB4 431 aa19.29■□□□□ 0.68
SDC2-205ENST00000520233 JADE1Q6IE81 842 aa19.29■□□□□ 0.68
SDC2-205ENST00000520233 WDR49Q8IV35 697 aa19.29■□□□□ 0.68
SDC2-205ENST00000520233 ABI1Q8IZP0 508 aa19.29■□□□□ 0.68
SDC2-205ENST00000520233 ANKRD20A12PQ8NF67 263 aa19.29■□□□□ 0.68
SDC2-205ENST00000520233 URGCPQ8TCY9 931 aa19.29■□□□□ 0.68
SDC2-205ENST00000520233 ZMAT2Q96NC0 199 aaKnown RBP19.29■□□□□ 0.68
SDC2-205ENST00000520233 CASD1Q96PB1 797 aa19.29■□□□□ 0.68
SDC2-205ENST00000520233 TMEM117Q9H0C3 514 aa19.29■□□□□ 0.68
SDC2-205ENST00000520233 MIOSQ9NXC5 875 aa19.29■□□□□ 0.68
SDC2-205ENST00000520233 KANSL3Q9P2N6 904 aa19.29■□□□□ 0.68
SDC2-205ENST00000520233 C2CD2Q9Y426 696 aa19.29■□□□□ 0.68
SDC2-205ENST00000520233 TULP1O00294 542 aaPredicted RBP19.28■□□□□ 0.68
SDC2-205ENST00000520233 STX10O60499 249 aa19.28■□□□□ 0.68
SDC2-205ENST00000520233 NFICP08651 508 aa19.28■□□□□ 0.68
SDC2-205ENST00000520233 DLATP10515 647 aaKnown RBP19.28■□□□□ 0.68
SDC2-205ENST00000520233 TNNI1P19237 187 aa19.28■□□□□ 0.68
SDC2-205ENST00000520233 BMP8BP34820 402 aa19.28■□□□□ 0.68
SDC2-205ENST00000520233 SCNN1GP51170 649 aa19.28■□□□□ 0.68
SDC2-205ENST00000520233 AFF1P51825 1210 aaKnown RBP19.28■□□□□ 0.68
SDC2-205ENST00000520233 TMEM132DQ14C87 1099 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms