RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 FOSP01100 380 aaPredicted RBP5.51□□□□□ -1.53
SDCBP-207ENST00000520168 SSBP05455 408 aaKnown RBP eCLIP5.51□□□□□ -1.53
SDCBP-207ENST00000520168 POU2F2P09086 479 aa5.51□□□□□ -1.53
SDCBP-207ENST00000520168 HNRNPA1P09651 372 aaKnown RBP eCLIP5.51□□□□□ -1.53
SDCBP-207ENST00000520168 HOXA9P31269 272 aa5.51□□□□□ -1.53
SDCBP-207ENST00000520168 SLC11A1P49279 550 aa5.51□□□□□ -1.53
SDCBP-207ENST00000520168 GNAQP50148 359 aa5.51□□□□□ -1.53
SDCBP-207ENST00000520168 GPC3P51654 580 aa5.51□□□□□ -1.53
SDCBP-207ENST00000520168 DSG1Q02413 1049 aa5.51□□□□□ -1.53
SDCBP-207ENST00000520168 TROAPQ12815 778 aa5.51□□□□□ -1.53
SDCBP-207ENST00000520168 MTAPQ13126 283 aa5.51□□□□□ -1.53
SDCBP-207ENST00000520168 NMIQ13287 307 aaPredicted RBP5.51□□□□□ -1.53
SDCBP-207ENST00000520168 GLIPR1L2Q4G1C9 344 aa5.51□□□□□ -1.53
SDCBP-207ENST00000520168 CEP55Q53EZ4 464 aa5.51□□□□□ -1.53
SDCBP-207ENST00000520168 EFCAB12Q6NXP0 572 aa5.51□□□□□ -1.53
SDCBP-207ENST00000520168 TPRG1Q6ZUI0 275 aa5.51□□□□□ -1.53
SDCBP-207ENST00000520168 RTL10Q7L3V2 364 aa5.51□□□□□ -1.53
SDCBP-207ENST00000520168 CATIPQ7Z7H3 387 aa5.51□□□□□ -1.53
SDCBP-207ENST00000520168 CCDC60Q8IWA6 550 aaPredicted RBP5.51□□□□□ -1.53
SDCBP-207ENST00000520168 CKAP2LQ8IYA6 745 aa5.51□□□□□ -1.53
SDCBP-207ENST00000520168 VWA5B2Q8N398 1253 aa5.51□□□□□ -1.53
SDCBP-207ENST00000520168 CCDC82Q8N4S0 544 aa5.51□□□□□ -1.53
SDCBP-207ENST00000520168 CTCFLQ8NI51 663 aaPredicted RBP5.51□□□□□ -1.53
SDCBP-207ENST00000520168 MSANTD3Q96H12 275 aa5.51□□□□□ -1.53
SDCBP-207ENST00000520168 NAP1L5Q96NT1 182 aaPredicted RBP5.51□□□□□ -1.53
SDCBP-207ENST00000520168 PPP1R16BQ96T49 567 aa5.51□□□□□ -1.53
SDCBP-207ENST00000520168 PHF20Q9BVI0 1012 aa5.51□□□□□ -1.53
SDCBP-207ENST00000520168 VN1R3Q9BXE9 311 aa5.51□□□□□ -1.53
SDCBP-207ENST00000520168 GCOM2Q9BZD3 368 aaPredicted RBP5.51□□□□□ -1.53
SDCBP-207ENST00000520168 ADAMTS10Q9H324 1103 aa5.51□□□□□ -1.53
SDCBP-207ENST00000520168 AGO4Q9HCK5 861 aaKnown RBP5.51□□□□□ -1.53
SDCBP-207ENST00000520168 UBN1Q9NPG3 1134 aa5.51□□□□□ -1.53
SDCBP-207ENST00000520168 RXFP3Q9NSD7 469 aa5.51□□□□□ -1.53
SDCBP-207ENST00000520168 FAM105AQ9NUU6 356 aa5.51□□□□□ -1.53
SDCBP-207ENST00000520168 FNIP2Q9P278 1114 aa5.51□□□□□ -1.53
SDCBP-207ENST00000520168 DNAJB4Q9UDY4 337 aa5.51□□□□□ -1.53
SDCBP-207ENST00000520168 MTF2Q9Y483 593 aaPredicted RBP5.51□□□□□ -1.53
SDCBP-207ENST00000520168 MAFBQ9Y5Q3 323 aaPredicted RBP5.51□□□□□ -1.53
SDCBP-207ENST00000520168 NOTCH4Q99466 2003 aa5.51□□□□□ -1.53
SDCBP-207ENST00000520168 NUP205Q92621 2012 aa5.5□□□□□ -1.53
SDCBP-207ENST00000520168 EML5Q05BV3 1969 aa5.5□□□□□ -1.53
SDCBP-207ENST00000520168 CDC14CA4D256 554 aa5.5□□□□□ -1.53
SDCBP-207ENST00000520168 TAF4O00268 1085 aa5.5□□□□□ -1.53
SDCBP-207ENST00000520168 C2CD2LO14523 706 aa5.5□□□□□ -1.53
SDCBP-207ENST00000520168 NRP1O14786 923 aa5.5□□□□□ -1.53
SDCBP-207ENST00000520168 TGM5O43548 720 aa5.5□□□□□ -1.53
SDCBP-207ENST00000520168 GAS2O43903 313 aaKnown RBP5.5□□□□□ -1.53
SDCBP-207ENST00000520168 XYLBO75191 536 aa5.5□□□□□ -1.53
SDCBP-207ENST00000520168 ECI2O75521 394 aa5.5□□□□□ -1.53
SDCBP-207ENST00000520168 OFD1O75665 1012 aa5.5□□□□□ -1.53
SDCBP-207ENST00000520168 DDAH1O94760 285 aa5.5□□□□□ -1.53
SDCBP-207ENST00000520168 KCNK5O95279 499 aa5.5□□□□□ -1.53
SDCBP-207ENST00000520168 PSAPP07602 524 aa5.5□□□□□ -1.53
SDCBP-207ENST00000520168 ZNF806P0C7X5 589 aa5.5□□□□□ -1.53
SDCBP-207ENST00000520168 TARSP26639 723 aaKnown RBP5.5□□□□□ -1.53
SDCBP-207ENST00000520168 DNM2P50570 870 aa5.5□□□□□ -1.53
SDCBP-207ENST00000520168 CLCN3P51790 818 aa5.5□□□□□ -1.53
SDCBP-207ENST00000520168 MLLT6P55198 1093 aaPredicted RBP5.5□□□□□ -1.53
SDCBP-207ENST00000520168 MARSP56192 900 aaKnown RBP5.5□□□□□ -1.53
SDCBP-207ENST00000520168 SETQ01105 290 aaPredicted RBP5.5□□□□□ -1.53
SDCBP-207ENST00000520168 ITGB3BPQ13352 177 aaPredicted RBP5.5□□□□□ -1.53
SDCBP-207ENST00000520168 SLC35G1Q2M3R5 365 aa5.5□□□□□ -1.53
SDCBP-207ENST00000520168 LIN9Q5TKA1 542 aa5.5□□□□□ -1.53
SDCBP-207ENST00000520168 ZNF746Q6NUN9 644 aaPredicted RBP5.5□□□□□ -1.53
SDCBP-207ENST00000520168 TSSK4Q6SA08 328 aa5.5□□□□□ -1.53
SDCBP-207ENST00000520168 PARM1Q6UWI2 310 aa5.5□□□□□ -1.53
SDCBP-207ENST00000520168 ZNF410Q86VK4 478 aa5.5□□□□□ -1.53
SDCBP-207ENST00000520168 LONP2Q86WA8 852 aa5.5□□□□□ -1.53
SDCBP-207ENST00000520168 RNF168Q8IYW5 571 aaPredicted RBP5.5□□□□□ -1.53
SDCBP-207ENST00000520168 LINC01465Q8N7H1 131 aa5.5□□□□□ -1.53
SDCBP-207ENST00000520168 CNNM3Q8NE01 707 aa5.5□□□□□ -1.53
SDCBP-207ENST00000520168 FEZF2Q8TBJ5 459 aa5.5□□□□□ -1.53
SDCBP-207ENST00000520168 BCL7CQ8WUZ0 217 aaPredicted RBP5.5□□□□□ -1.53
SDCBP-207ENST00000520168 MAP4K1Q92918 833 aa5.5□□□□□ -1.53
SDCBP-207ENST00000520168 SCARF2Q96GP6 870 aaPredicted RBP5.5□□□□□ -1.53
SDCBP-207ENST00000520168 MBOAT7Q96N66 472 aa5.5□□□□□ -1.53
SDCBP-207ENST00000520168 KCTD15Q96SI1 283 aaPredicted RBP5.5□□□□□ -1.53
SDCBP-207ENST00000520168 ARHGAP9Q9BRR9 750 aa5.5□□□□□ -1.53
SDCBP-207ENST00000520168 LSM14BQ9BX40 385 aaKnown RBP5.5□□□□□ -1.53
SDCBP-207ENST00000520168 GBP3Q9H0R5 595 aa5.5□□□□□ -1.53
SDCBP-207ENST00000520168 GLT8D2Q9H1C3 349 aa5.5□□□□□ -1.53
SDCBP-207ENST00000520168 TBC1D22BQ9NU19 505 aa5.5□□□□□ -1.53
SDCBP-207ENST00000520168 GDE1Q9NZC3 331 aa5.5□□□□□ -1.53
SDCBP-207ENST00000520168 ANKFY1Q9P2R3 1169 aa5.5□□□□□ -1.53
SDCBP-207ENST00000520168 KCNH3Q9ULD8 1083 aa5.5□□□□□ -1.53
SDCBP-207ENST00000520168 PCDHA6Q9UN73 950 aa5.5□□□□□ -1.53
SDCBP-207ENST00000520168 PIN4Q9Y237 131 aaKnown RBP5.5□□□□□ -1.53
SDCBP-207ENST00000520168 INPP5FQ9Y2H2 1132 aa5.5□□□□□ -1.53
SDCBP-207ENST00000520168 PCDHA8Q9Y5H6 950 aa5.5□□□□□ -1.53
SDCBP-207ENST00000520168 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.5□□□□□ -1.53
SDCBP-207ENST00000520168 IGF2RP11717 2491 aa5.5□□□□□ -1.53
SDCBP-207ENST00000520168 IGSF10Q6WRI0 2623 aa5.49□□□□□ -1.53
SDCBP-207ENST00000520168 SRRM3A6NNA2 597 aaPredicted RBP5.49□□□□□ -1.53
SDCBP-207ENST00000520168 C1QTNF9BB2RNN3 333 aa5.49□□□□□ -1.53
SDCBP-207ENST00000520168 hCG_1984214I3L0E3 225 aa5.49□□□□□ -1.53
SDCBP-207ENST00000520168 IPO5O00410 1097 aaKnown RBP5.49□□□□□ -1.53
SDCBP-207ENST00000520168 MEIS1O00470 390 aa5.49□□□□□ -1.53
SDCBP-207ENST00000520168 IFIT3O14879 490 aaKnown RBP5.49□□□□□ -1.53
SDCBP-207ENST00000520168 EFEMP2O95967 443 aa5.49□□□□□ -1.53
SDCBP-207ENST00000520168 C1QTNF9P0C862 333 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms