RNA–Protein interactions for RNA: ENST00000520003.5

CSGALNACT1-208, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 4

Gene CSGALNACT1, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-208ENST00000520003 TUSC3Q13454 348 aa17.36■□□□□ 0.37
CSGALNACT1-208ENST00000520003 NAB2Q15742 525 aa17.36■□□□□ 0.37
CSGALNACT1-208ENST00000520003 MTSS1LQ765P7 747 aa17.36■□□□□ 0.37
CSGALNACT1-208ENST00000520003 BORCS6Q96GS4 357 aa17.36■□□□□ 0.37
CSGALNACT1-208ENST00000520003 TTPALQ9BTX7 342 aa17.36■□□□□ 0.37
CSGALNACT1-208ENST00000520003 OSBPL6Q9BZF3 934 aa17.36■□□□□ 0.37
CSGALNACT1-208ENST00000520003 POLR3FQ9H1D9 316 aaPredicted RBP17.36■□□□□ 0.37
CSGALNACT1-208ENST00000520003 FBXO4Q9UKT5 387 aa17.36■□□□□ 0.37
CSGALNACT1-208ENST00000520003 COL4A3Q01955 1670 aa17.36■□□□□ 0.37
CSGALNACT1-208ENST00000520003 DOCK6Q96HP0 2047 aa17.35■□□□□ 0.37
CSGALNACT1-208ENST00000520003 ADAM12O43184 909 aa17.35■□□□□ 0.37
CSGALNACT1-208ENST00000520003 USO1O60763 962 aaKnown RBP17.35■□□□□ 0.37
CSGALNACT1-208ENST00000520003 KIF4AO95239 1232 aa17.35■□□□□ 0.37
CSGALNACT1-208ENST00000520003 C8AP07357 584 aa17.35■□□□□ 0.37
CSGALNACT1-208ENST00000520003 XRCC6P12956 609 aaKnown RBP eCLIP17.35■□□□□ 0.37
CSGALNACT1-208ENST00000520003 FOSBP53539 338 aa17.35■□□□□ 0.37
CSGALNACT1-208ENST00000520003 SNW1Q13573 536 aaKnown RBP17.35■□□□□ 0.37
CSGALNACT1-208ENST00000520003 MLF2Q15773 248 aaPredicted RBP17.35■□□□□ 0.37
CSGALNACT1-208ENST00000520003 FAM187BQ17R55 369 aa17.35■□□□□ 0.37
CSGALNACT1-208ENST00000520003 PRIMPOLQ96LW4 560 aa17.35■□□□□ 0.37
CSGALNACT1-208ENST00000520003 GPRC5CQ9NQ84 441 aa17.35■□□□□ 0.37
CSGALNACT1-208ENST00000520003 PARP2Q9UGN5 583 aa17.35■□□□□ 0.37
CSGALNACT1-208ENST00000520003 CASTOR2A6NHX0 329 aa17.34■□□□□ 0.37
CSGALNACT1-208ENST00000520003 SPTLC1O15269 473 aa17.34■□□□□ 0.37
CSGALNACT1-208ENST00000520003 EIF5BO60841 1220 aaKnown RBP17.34■□□□□ 0.37
CSGALNACT1-208ENST00000520003 KINO60870 393 aaKnown RBP17.34■□□□□ 0.37
CSGALNACT1-208ENST00000520003 PSMD5Q16401 504 aa17.34■□□□□ 0.37
CSGALNACT1-208ENST00000520003 SLC44A4Q53GD3 710 aa17.34■□□□□ 0.37
CSGALNACT1-208ENST00000520003 PPM1LQ5SGD2 360 aa17.34■□□□□ 0.37
CSGALNACT1-208ENST00000520003 LIN9Q5TKA1 542 aa17.34■□□□□ 0.37
CSGALNACT1-208ENST00000520003 FAM171A1Q5VUB5 890 aa17.34■□□□□ 0.37
CSGALNACT1-208ENST00000520003 CDCA2Q69YH5 1023 aaPredicted RBP17.34■□□□□ 0.37
CSGALNACT1-208ENST00000520003 RSPO2Q6UXX9 243 aaPredicted RBP17.34■□□□□ 0.37
CSGALNACT1-208ENST00000520003 ITFG1Q8TB96 612 aa17.34■□□□□ 0.37
CSGALNACT1-208ENST00000520003 HASPINQ8TF76 798 aa17.34■□□□□ 0.37
CSGALNACT1-208ENST00000520003 NELL1Q92832 810 aa17.34■□□□□ 0.37
CSGALNACT1-208ENST00000520003 FZD8Q9H461 694 aa17.34■□□□□ 0.37
CSGALNACT1-208ENST00000520003 MYH15Q9Y2K3 1946 aa17.34■□□□□ 0.37
CSGALNACT1-208ENST00000520003 MTF2Q9Y483 593 aaPredicted RBP17.34■□□□□ 0.37
CSGALNACT1-208ENST00000520003 TTLL13PA6NNM8 815 aa17.33■□□□□ 0.36
CSGALNACT1-208ENST00000520003 CCL16O15467 120 aa17.33■□□□□ 0.36
CSGALNACT1-208ENST00000520003 MED24O75448 989 aa17.33■□□□□ 0.36
CSGALNACT1-208ENST00000520003 NEK4P51957 841 aa17.33■□□□□ 0.36
CSGALNACT1-208ENST00000520003 RAB33AQ14088 237 aa17.33■□□□□ 0.36
CSGALNACT1-208ENST00000520003 CATSPER3Q86XQ3 398 aa17.33■□□□□ 0.36
CSGALNACT1-208ENST00000520003 NPAS3Q8IXF0 933 aa17.33■□□□□ 0.36
CSGALNACT1-208ENST00000520003 ZBTB44Q8NCP5 570 aa17.33■□□□□ 0.36
CSGALNACT1-208ENST00000520003 CCDC43Q96MW1 224 aaKnown RBP17.33■□□□□ 0.36
CSGALNACT1-208ENST00000520003 HINFPQ9BQA5 517 aa17.33■□□□□ 0.36
CSGALNACT1-208ENST00000520003 BCO2Q9BYV7 579 aa17.33■□□□□ 0.36
CSGALNACT1-208ENST00000520003 CXCL16Q9H2A7 254 aa17.33■□□□□ 0.36
CSGALNACT1-208ENST00000520003 TUFT1Q9NNX1 390 aa17.33■□□□□ 0.36
CSGALNACT1-208ENST00000520003 PRMT7Q9NVM4 692 aaPredicted RBP17.33■□□□□ 0.36
CSGALNACT1-208ENST00000520003 PCDHGA2Q9Y5H1 932 aa17.33■□□□□ 0.36
CSGALNACT1-208ENST00000520003 VWA8A3KMH1 1905 aa17.32■□□□□ 0.36
CSGALNACT1-208ENST00000520003 LRRIQ4A6NIV6 560 aa17.32■□□□□ 0.36
CSGALNACT1-208ENST00000520003 LAMTOR5O43504 91 aa17.32■□□□□ 0.36
CSGALNACT1-208ENST00000520003 XYLBO75191 536 aa17.32■□□□□ 0.36
CSGALNACT1-208ENST00000520003 THP07101 528 aa17.32■□□□□ 0.36
CSGALNACT1-208ENST00000520003 MAGEA9P43362 315 aa17.32■□□□□ 0.36
CSGALNACT1-208ENST00000520003 PFKPQ01813 784 aa17.32■□□□□ 0.36
CSGALNACT1-208ENST00000520003 ELAVL2Q12926 359 aaKnown RBP17.32■□□□□ 0.36
CSGALNACT1-208ENST00000520003 TRIM29Q14134 588 aa17.32■□□□□ 0.36
CSGALNACT1-208ENST00000520003 UVSSAQ2YD98 709 aa17.32■□□□□ 0.36
CSGALNACT1-208ENST00000520003 PDXDC1Q6P996 788 aa17.32■□□□□ 0.36
CSGALNACT1-208ENST00000520003 RTL10Q7L3V2 364 aa17.32■□□□□ 0.36
CSGALNACT1-208ENST00000520003 MAEAQ7L5Y9 396 aa17.32■□□□□ 0.36
CSGALNACT1-208ENST00000520003 SLC7A14Q8TBB6 771 aa17.32■□□□□ 0.36
CSGALNACT1-208ENST00000520003 CLDN23Q96B33 292 aa17.32■□□□□ 0.36
CSGALNACT1-208ENST00000520003 POLR3CQ9BUI4 534 aaPredicted RBP17.32■□□□□ 0.36
CSGALNACT1-208ENST00000520003 PDZD7Q9H5P4 517 aa17.32■□□□□ 0.36
CSGALNACT1-208ENST00000520003 LTB4R2Q9NPC1 389 aa17.32■□□□□ 0.36
CSGALNACT1-208ENST00000520003 SPATA6Q9NWH7 488 aaPredicted RBP17.32■□□□□ 0.36
CSGALNACT1-208ENST00000520003 KCNH3Q9ULD8 1083 aa17.32■□□□□ 0.36
CSGALNACT1-208ENST00000520003 PATJQ8NI35 1801 aa17.32■□□□□ 0.36
CSGALNACT1-208ENST00000520003 FAM170BA6NMN3 283 aa17.31■□□□□ 0.36
CSGALNACT1-208ENST00000520003 TMEM189-UBE2V1I3L0A0 370 aa17.31■□□□□ 0.36
CSGALNACT1-208ENST00000520003 LILRB5O75023 590 aa17.31■□□□□ 0.36
CSGALNACT1-208ENST00000520003 RECQL4O94761 1208 aa17.31■□□□□ 0.36
CSGALNACT1-208ENST00000520003 EDN1P05305 212 aa17.31■□□□□ 0.36
CSGALNACT1-208ENST00000520003 FGFR3P22607 806 aa17.31■□□□□ 0.36
CSGALNACT1-208ENST00000520003 MCM7P33993 719 aa17.31■□□□□ 0.36
CSGALNACT1-208ENST00000520003 VARS2Q5ST30 1063 aaKnown RBP17.31■□□□□ 0.36
CSGALNACT1-208ENST00000520003 AXDND1Q5T1B0 1012 aaPredicted RBP17.31■□□□□ 0.36
CSGALNACT1-208ENST00000520003 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.31■□□□□ 0.36
CSGALNACT1-208ENST00000520003 CEP57Q86XR8 500 aa17.31■□□□□ 0.36
CSGALNACT1-208ENST00000520003 MCPH1Q8NEM0 835 aa17.31■□□□□ 0.36
CSGALNACT1-208ENST00000520003 BSNDQ8WZ55 320 aa17.31■□□□□ 0.36
CSGALNACT1-208ENST00000520003 KXD1Q9BQD3 176 aa17.31■□□□□ 0.36
CSGALNACT1-208ENST00000520003 HCFC1R1Q9NWW0 138 aa17.31■□□□□ 0.36
CSGALNACT1-208ENST00000520003 SNTG2Q9NY99 539 aa17.31■□□□□ 0.36
CSGALNACT1-208ENST00000520003 DNMT3BQ9UBC3 853 aaKnown RBP17.31■□□□□ 0.36
CSGALNACT1-208ENST00000520003 MTRRQ9UBK8 725 aa17.31■□□□□ 0.36
CSGALNACT1-208ENST00000520003 NOTCH4Q99466 2003 aa17.31■□□□□ 0.36
CSGALNACT1-208ENST00000520003 MIA3Q5JRA6 1907 aa17.31■□□□□ 0.36
CSGALNACT1-208ENST00000520003 SHISA7A6NL88 538 aa17.3■□□□□ 0.36
CSGALNACT1-208ENST00000520003 N4BP3O15049 544 aa17.3■□□□□ 0.36
CSGALNACT1-208ENST00000520003 ATP2B1P20020 1258 aa17.3■□□□□ 0.36
CSGALNACT1-208ENST00000520003 CD72P21854 359 aa17.3■□□□□ 0.36
CSGALNACT1-208ENST00000520003 IGFBP6P24592 240 aaPredicted RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms