RNA–Protein interactions for RNA: ENST00000519436.1

ARFGEF1-206, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARFGEF1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-206ENST00000519436 HFE2Q6ZVN8 426 aa23.3■■□□□ 1.32
ARFGEF1-206ENST00000519436 HASPINQ8TF76 798 aa23.3■■□□□ 1.32
ARFGEF1-206ENST00000519436 HDAC7Q8WUI4 952 aa23.3■■□□□ 1.32
ARFGEF1-206ENST00000519436 ZBTB45Q96K62 511 aaPredicted RBP23.3■■□□□ 1.32
ARFGEF1-206ENST00000519436 RHOBTB2Q9BYZ6 727 aa23.3■■□□□ 1.32
ARFGEF1-206ENST00000519436 MAN1C1Q9NR34 630 aa23.3■■□□□ 1.32
ARFGEF1-206ENST00000519436 USTQ9Y2C2 406 aa23.3■■□□□ 1.32
ARFGEF1-206ENST00000519436 CLIC4Q9Y696 253 aa23.3■■□□□ 1.32
ARFGEF1-206ENST00000519436 SF3B1O75533 1304 aaKnown RBP eCLIP23.3■■□□□ 1.323e-6■■■■■ 76.6
ARFGEF1-206ENST00000519436 TMEM189-UBE2V1I3L0A0 370 aa23.29■■□□□ 1.32
ARFGEF1-206ENST00000519436 GLUD1P00367 558 aa23.29■■□□□ 1.32
ARFGEF1-206ENST00000519436 MCF2P10911 925 aa23.29■■□□□ 1.32
ARFGEF1-206ENST00000519436 SMTNP53814 917 aa23.29■■□□□ 1.32
ARFGEF1-206ENST00000519436 CACNB1Q02641 598 aaPredicted RBP23.29■■□□□ 1.32
ARFGEF1-206ENST00000519436 PTPN21Q16825 1174 aa23.29■■□□□ 1.32
ARFGEF1-206ENST00000519436 MPZL3Q6UWV2 235 aa23.29■■□□□ 1.32
ARFGEF1-206ENST00000519436 BMP8AQ7Z5Y6 402 aa23.29■■□□□ 1.32
ARFGEF1-206ENST00000519436 LNX1Q8TBB1 728 aaPredicted RBP23.29■■□□□ 1.32
ARFGEF1-206ENST00000519436 CALML4Q96GE6 196 aa23.29■■□□□ 1.32
ARFGEF1-206ENST00000519436 CCSER1Q9C0I3 900 aa23.29■■□□□ 1.32
ARFGEF1-206ENST00000519436 TGM5O43548 720 aa23.28■■□□□ 1.32
ARFGEF1-206ENST00000519436 RPL17P18621 184 aaKnown RBP23.28■■□□□ 1.32
ARFGEF1-206ENST00000519436 PLCG1P19174 1290 aa23.28■■□□□ 1.32
ARFGEF1-206ENST00000519436 NCKAP1LP55160 1127 aa23.28■■□□□ 1.32
ARFGEF1-206ENST00000519436 KARSQ15046 597 aaKnown RBP23.28■■□□□ 1.32
ARFGEF1-206ENST00000519436 FAM171A1Q5VUB5 890 aa23.28■■□□□ 1.32
ARFGEF1-206ENST00000519436 FAM173BQ6P4H8 233 aa23.28■■□□□ 1.32
ARFGEF1-206ENST00000519436 DCLRE1AQ6PJP8 1040 aa23.28■■□□□ 1.32
ARFGEF1-206ENST00000519436 PRSS55Q6UWB4 352 aaPredicted RBP23.28■■□□□ 1.32
ARFGEF1-206ENST00000519436 ZBTB33Q86T24 672 aa23.28■■□□□ 1.32
ARFGEF1-206ENST00000519436 PALB2Q86YC2 1186 aa23.28■■□□□ 1.32
ARFGEF1-206ENST00000519436 ZDHHC14Q8IZN3 488 aa23.28■■□□□ 1.32
ARFGEF1-206ENST00000519436 PIK3R5Q8WYR1 880 aa23.28■■□□□ 1.32
ARFGEF1-206ENST00000519436 ZMAT2Q96NC0 199 aaKnown RBP23.28■■□□□ 1.32
ARFGEF1-206ENST00000519436 CLSTN3Q9BQT9 956 aa23.28■■□□□ 1.32
ARFGEF1-206ENST00000519436 TTPALQ9BTX7 342 aa23.28■■□□□ 1.32
ARFGEF1-206ENST00000519436 CCDC94Q9BW85 323 aaPredicted RBP23.28■■□□□ 1.32
ARFGEF1-206ENST00000519436 TSHZ2Q9NRE2 1034 aa23.28■■□□□ 1.32
ARFGEF1-206ENST00000519436 ODF2LQ9ULJ1 636 aa23.28■■□□□ 1.32
ARFGEF1-206ENST00000519436 HCN4Q9Y3Q4 1203 aa23.28■■□□□ 1.32
ARFGEF1-206ENST00000519436 TOM1L1O75674 476 aa23.27■■□□□ 1.32
ARFGEF1-206ENST00000519436 SPATA31D3P0C874 917 aa23.27■■□□□ 1.32
ARFGEF1-206ENST00000519436 KCNE1P15382 129 aa23.27■■□□□ 1.32
ARFGEF1-206ENST00000519436 CLCNKBP51801 687 aa23.27■■□□□ 1.32
ARFGEF1-206ENST00000519436 ZNF131P52739 623 aa23.27■■□□□ 1.32
ARFGEF1-206ENST00000519436 OSTNP61366 133 aa23.27■■□□□ 1.32
ARFGEF1-206ENST00000519436 SOX4Q06945 474 aaPredicted RBP23.27■■□□□ 1.32
ARFGEF1-206ENST00000519436 UPP1Q16831 310 aa23.27■■□□□ 1.32
ARFGEF1-206ENST00000519436 ZPBP2Q6X784 338 aa23.27■■□□□ 1.32
ARFGEF1-206ENST00000519436 SPATA31D4Q6ZUB0 917 aa23.27■■□□□ 1.32
ARFGEF1-206ENST00000519436 USP49Q70CQ1 688 aa23.27■■□□□ 1.32
ARFGEF1-206ENST00000519436 RAD54LQ92698 747 aa23.27■■□□□ 1.32
ARFGEF1-206ENST00000519436 SNX27Q96L92 541 aa23.27■■□□□ 1.32
ARFGEF1-206ENST00000519436 ACAP3Q96P50 834 aa23.27■■□□□ 1.32
ARFGEF1-206ENST00000519436 REEP2Q9BRK0 252 aa23.27■■□□□ 1.32
ARFGEF1-206ENST00000519436 TCHPQ9BT92 498 aa23.27■■□□□ 1.32
ARFGEF1-206ENST00000519436 PLEKHA4Q9H4M7 779 aa23.27■■□□□ 1.32
ARFGEF1-206ENST00000519436 LARSQ9P2J5 1176 aaKnown RBP23.27■■□□□ 1.32
ARFGEF1-206ENST00000519436 DPP7Q9UHL4 492 aa23.27■■□□□ 1.32
ARFGEF1-206ENST00000519436 MTMR6Q9Y217 621 aa23.27■■□□□ 1.32
ARFGEF1-206ENST00000519436 CCDC195A0A1B0GUA6 201 aa23.26■■□□□ 1.31
ARFGEF1-206ENST00000519436 TMEM221A6NGB7 291 aa23.26■■□□□ 1.31
ARFGEF1-206ENST00000519436 M0R296 226 aa23.26■■□□□ 1.31
ARFGEF1-206ENST00000519436 RFPL2O75678 378 aa23.26■■□□□ 1.31
ARFGEF1-206ENST00000519436 MYBP10242 640 aa23.26■■□□□ 1.31
ARFGEF1-206ENST00000519436 YARSP54577 528 aaKnown RBP23.26■■□□□ 1.31
ARFGEF1-206ENST00000519436 CREMQ03060 361 aa23.26■■□□□ 1.31
ARFGEF1-206ENST00000519436 SIGLEC14Q08ET2 396 aa23.26■■□□□ 1.31
ARFGEF1-206ENST00000519436 ELAVL2Q12926 359 aaKnown RBP23.26■■□□□ 1.31
ARFGEF1-206ENST00000519436 MCM6Q14566 821 aa23.26■■□□□ 1.31
ARFGEF1-206ENST00000519436 CYP26C1Q6V0L0 522 aa23.26■■□□□ 1.31
ARFGEF1-206ENST00000519436 GPBP1Q86WP2 473 aa23.26■■□□□ 1.31
ARFGEF1-206ENST00000519436 ZNF707Q96C28 371 aaPredicted RBP23.26■■□□□ 1.31
ARFGEF1-206ENST00000519436 ASIC4Q96FT7 647 aa23.26■■□□□ 1.31
ARFGEF1-206ENST00000519436 EPSTI1Q96J88 318 aa23.26■■□□□ 1.31
ARFGEF1-206ENST00000519436 HAPLN2Q9GZV7 340 aa23.26■■□□□ 1.31
ARFGEF1-206ENST00000519436 GOLGA2P5Q9HBQ8 144 aa23.26■■□□□ 1.31
ARFGEF1-206ENST00000519436 TOPORSQ9NS56 1045 aaPredicted RBP23.26■■□□□ 1.31
ARFGEF1-206ENST00000519436 FBXO2Q9UK22 296 aaPredicted RBP23.26■■□□□ 1.31
ARFGEF1-206ENST00000519436 SRPRBQ9Y5M8 271 aaKnown RBP23.26■■□□□ 1.31
ARFGEF1-206ENST00000519436 K7ELQ4 463 aaPredicted RBP23.25■■□□□ 1.31
ARFGEF1-206ENST00000519436 B3GAT3O94766 335 aa23.25■■□□□ 1.31
ARFGEF1-206ENST00000519436 FGFR3P22607 806 aa23.25■■□□□ 1.31
ARFGEF1-206ENST00000519436 DDIT3P35638 169 aa23.25■■□□□ 1.31
ARFGEF1-206ENST00000519436 MCL1Q07820 350 aa23.25■■□□□ 1.31
ARFGEF1-206ENST00000519436 STRN3Q13033 797 aa23.25■■□□□ 1.31
ARFGEF1-206ENST00000519436 SLC10A6Q3KNW5 377 aa23.25■■□□□ 1.31
ARFGEF1-206ENST00000519436 HAUS6Q7Z4H7 955 aa23.25■■□□□ 1.31
ARFGEF1-206ENST00000519436 PLCD3Q8N3E9 789 aa23.25■■□□□ 1.31
ARFGEF1-206ENST00000519436 C3orf58Q8NDZ4 430 aa23.25■■□□□ 1.31
ARFGEF1-206ENST00000519436 UROC1Q96N76 676 aa23.25■■□□□ 1.31
ARFGEF1-206ENST00000519436 FIZ1Q96SL8 496 aa23.25■■□□□ 1.31
ARFGEF1-206ENST00000519436 CNTN3Q9P232 1028 aa23.25■■□□□ 1.31
ARFGEF1-206ENST00000519436 SPDYE4A6NLX3 237 aa23.24■■□□□ 1.31
ARFGEF1-206ENST00000519436 ADAM12O43184 909 aa23.24■■□□□ 1.31
ARFGEF1-206ENST00000519436 MARCKSP29966 332 aaPredicted RBP23.24■■□□□ 1.31
ARFGEF1-206ENST00000519436 DHX8Q14562 1220 aaKnown RBP23.24■■□□□ 1.31
ARFGEF1-206ENST00000519436 SPECC1Q5M775 1068 aa23.24■■□□□ 1.31
ARFGEF1-206ENST00000519436 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.24■■□□□ 1.31
ARFGEF1-206ENST00000519436 CEP57Q86XR8 500 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms