RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 SERPINB8P50452 374 aa14.42□□□□□ -0.1
PABPC1-208ENST00000519004 GEMIN4P57678 1058 aaKnown RBP14.42□□□□□ -0.1
PABPC1-208ENST00000519004 SPARCL1Q14515 664 aa14.42□□□□□ -0.1
PABPC1-208ENST00000519004 RBM26Q5T8P6 1007 aaKnown RBP14.42□□□□□ -0.1
PABPC1-208ENST00000519004 NUP93Q8N1F7 819 aa14.42□□□□□ -0.1
PABPC1-208ENST00000519004 TTLL11Q8NHH1 800 aa14.42□□□□□ -0.1
PABPC1-208ENST00000519004 TUBB6Q9BUF5 446 aa14.42□□□□□ -0.1
PABPC1-208ENST00000519004 RBM38Q9H0Z9 239 aaKnown RBP14.42□□□□□ -0.1
PABPC1-208ENST00000519004 NPHS2Q9NP85 383 aa14.42□□□□□ -0.1
PABPC1-208ENST00000519004 ITGB1BP2Q9UKP3 347 aa14.42□□□□□ -0.1
PABPC1-208ENST00000519004 PCDHA6Q9UN73 950 aa14.42□□□□□ -0.1
PABPC1-208ENST00000519004 PCDHA8Q9Y5H6 950 aa14.42□□□□□ -0.1
PABPC1-208ENST00000519004 TNRQ92752 1358 aa14.41□□□□□ -0.1
PABPC1-208ENST00000519004 RASA4BC9J798 803 aa14.41□□□□□ -0.1
PABPC1-208ENST00000519004 RASA4O43374 803 aa14.41□□□□□ -0.1
PABPC1-208ENST00000519004 GAS8O95995 478 aa14.41□□□□□ -0.1
PABPC1-208ENST00000519004 CHRNB2P17787 502 aa14.41□□□□□ -0.1
PABPC1-208ENST00000519004 OR6Y1Q8NGX8 325 aa14.41□□□□□ -0.1
PABPC1-208ENST00000519004 DEPTORQ8TB45 409 aa14.41□□□□□ -0.1
PABPC1-208ENST00000519004 LNX1Q8TBB1 728 aaPredicted RBP14.41□□□□□ -0.1
PABPC1-208ENST00000519004 ZNF398Q8TD17 642 aa14.41□□□□□ -0.1
PABPC1-208ENST00000519004 GPKOWQ92917 476 aaPredicted RBP eCLIP14.41□□□□□ -0.1
PABPC1-208ENST00000519004 PRR11Q96HE9 360 aaPredicted RBP14.41□□□□□ -0.1
PABPC1-208ENST00000519004 CDK5RAP3Q96JB5 506 aa14.41□□□□□ -0.1
PABPC1-208ENST00000519004 CEP63Q96MT8 703 aa14.41□□□□□ -0.1
PABPC1-208ENST00000519004 AJAP1Q9UKB5 411 aaPredicted RBP14.41□□□□□ -0.1
PABPC1-208ENST00000519004 HEY1Q9Y5J3 304 aa14.41□□□□□ -0.1
PABPC1-208ENST00000519004 SYNGAP1Q96PV0 1343 aa14.41□□□□□ -0.1
PABPC1-208ENST00000519004 DLEC1Q9Y238 1755 aa14.41□□□□□ -0.1
PABPC1-208ENST00000519004 RREB1Q92766 1687 aa14.41□□□□□ -0.1
PABPC1-208ENST00000519004 ZMYM2Q9UBW7 1377 aa14.41□□□□□ -0.1
PABPC1-208ENST00000519004 KIF13AQ9H1H9 1805 aa14.41□□□□□ -0.1
PABPC1-208ENST00000519004 OR52Z1P0C646 297 aa14.41□□□□□ -0.1
PABPC1-208ENST00000519004 COILP38432 576 aaPredicted RBP14.41□□□□□ -0.1
PABPC1-208ENST00000519004 GRB10Q13322 594 aa14.41□□□□□ -0.1
PABPC1-208ENST00000519004 MED21Q13503 144 aa14.41□□□□□ -0.1
PABPC1-208ENST00000519004 GRAMD4Q6IC98 578 aa14.41□□□□□ -0.1
PABPC1-208ENST00000519004 C1orf228Q6PIY5 440 aa14.41□□□□□ -0.1
PABPC1-208ENST00000519004 Q6ZNX1 250 aa14.41□□□□□ -0.1
PABPC1-208ENST00000519004 C3orf62Q6ZUJ4 267 aa14.41□□□□□ -0.1
PABPC1-208ENST00000519004 PRUNE1Q86TP1 453 aa14.41□□□□□ -0.1
PABPC1-208ENST00000519004 MYOCDQ8IZQ8 938 aa14.41□□□□□ -0.1
PABPC1-208ENST00000519004 CEP70Q8NHQ1 597 aa14.41□□□□□ -0.1
PABPC1-208ENST00000519004 DQX1Q8TE96 717 aaKnown RBP14.41□□□□□ -0.1
PABPC1-208ENST00000519004 MAML1Q92585 1016 aa14.41□□□□□ -0.1
PABPC1-208ENST00000519004 POP1Q99575 1024 aaKnown RBP14.41□□□□□ -0.1
PABPC1-208ENST00000519004 DNAJC17Q9NVM6 304 aaKnown RBP14.41□□□□□ -0.1
PABPC1-208ENST00000519004 NINJ2Q9NZG7 142 aa14.41□□□□□ -0.1
PABPC1-208ENST00000519004 TBC1D7Q9P0N9 293 aa14.41□□□□□ -0.1
PABPC1-208ENST00000519004 KIAA1522Q9P206 1035 aaPredicted RBP14.41□□□□□ -0.1
PABPC1-208ENST00000519004 DNAJB4Q9UDY4 337 aa14.41□□□□□ -0.1
PABPC1-208ENST00000519004 PPM1HQ9ULR3 514 aa14.41□□□□□ -0.1
PABPC1-208ENST00000519004 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.41□□□□□ -0.1
PABPC1-208ENST00000519004 MINDY4BA8MYZ0 360 aa14.4□□□□□ -0.1
PABPC1-208ENST00000519004 PDE5AO76074 875 aa14.4□□□□□ -0.1
PABPC1-208ENST00000519004 TROVE2P10155 538 aaKnown RBP eCLIP14.4□□□□□ -0.1
PABPC1-208ENST00000519004 PGM1P36871 562 aa14.4□□□□□ -0.1
PABPC1-208ENST00000519004 KCNH2Q12809 1159 aa14.4□□□□□ -0.1
PABPC1-208ENST00000519004 CALCOCO2Q13137 446 aa14.4□□□□□ -0.1
PABPC1-208ENST00000519004 MSLNQ13421 630 aaPredicted RBP14.4□□□□□ -0.1
PABPC1-208ENST00000519004 CYP1B1Q16678 543 aa14.4□□□□□ -0.1
PABPC1-208ENST00000519004 CC2D2BQ6DHV5 1058 aa14.4□□□□□ -0.1
PABPC1-208ENST00000519004 RFWD2Q8NHY2 731 aa14.4□□□□□ -0.1
PABPC1-208ENST00000519004 DHRS1Q96LJ7 313 aa14.4□□□□□ -0.1
PABPC1-208ENST00000519004 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.4□□□□□ -0.1
PABPC1-208ENST00000519004 DUOX1Q9NRD9 1551 aa14.4□□□□□ -0.1
PABPC1-208ENST00000519004 SCN11AQ9UI33 1791 aa14.4□□□□□ -0.1
PABPC1-208ENST00000519004 A0A1W2PRG0 241 aa14.4□□□□□ -0.1
PABPC1-208ENST00000519004 TCRBV7S2A1N4TA0A589 114 aa14.4□□□□□ -0.1
PABPC1-208ENST00000519004 E9PBE3 544 aa14.4□□□□□ -0.1
PABPC1-208ENST00000519004 PRPF4O43172 522 aaKnown RBP eCLIP14.4□□□□□ -0.14e-10■■□□□ 13.4
PABPC1-208ENST00000519004 AP1G1O43747 822 aa14.4□□□□□ -0.1
PABPC1-208ENST00000519004 SERPINB7O75635 380 aa14.4□□□□□ -0.1
PABPC1-208ENST00000519004 TMEM253P0C7T8 217 aa14.4□□□□□ -0.1
PABPC1-208ENST00000519004 RARBP10826 455 aa14.4□□□□□ -0.1
PABPC1-208ENST00000519004 UQCRBP14927 111 aa14.4□□□□□ -0.1
PABPC1-208ENST00000519004 PCSK6P29122 969 aa14.4□□□□□ -0.1
PABPC1-208ENST00000519004 HALP42357 657 aa14.4□□□□□ -0.1
PABPC1-208ENST00000519004 KCNJ1P48048 391 aa14.4□□□□□ -0.1
PABPC1-208ENST00000519004 TMED2Q15363 201 aa14.4□□□□□ -0.1
PABPC1-208ENST00000519004 ADRM1Q16186 407 aa14.4□□□□□ -0.1
PABPC1-208ENST00000519004 SFT2D3Q587I9 215 aa14.4□□□□□ -0.1
PABPC1-208ENST00000519004 VPS36Q86VN1 386 aa14.4□□□□□ -0.1
PABPC1-208ENST00000519004 CCDC105Q8IYK2 499 aa14.4□□□□□ -0.1
PABPC1-208ENST00000519004 BBS5Q8N3I7 341 aa14.4□□□□□ -0.1
PABPC1-208ENST00000519004 SLC30A5Q8TAD4 765 aa14.4□□□□□ -0.1
PABPC1-208ENST00000519004 RIN3Q8TB24 985 aa14.4□□□□□ -0.1
PABPC1-208ENST00000519004 KRT35Q92764 455 aa14.4□□□□□ -0.1
PABPC1-208ENST00000519004 ARHGEF26Q96DR7 871 aa14.4□□□□□ -0.1
PABPC1-208ENST00000519004 FAM161BQ96MY7 647 aa14.4□□□□□ -0.1
PABPC1-208ENST00000519004 PHF12Q96QT6 1004 aa14.4□□□□□ -0.1
PABPC1-208ENST00000519004 TTC1Q99614 292 aa14.4□□□□□ -0.1
PABPC1-208ENST00000519004 STK33Q9BYT3 514 aa14.4□□□□□ -0.1
PABPC1-208ENST00000519004 TRPV5Q9NQA5 729 aa14.4□□□□□ -0.1
PABPC1-208ENST00000519004 TELO2Q9Y4R8 837 aa14.4□□□□□ -0.1
PABPC1-208ENST00000519004 DOCK2Q92608 1830 aa14.39□□□□□ -0.11
PABPC1-208ENST00000519004 THAP12O43422 761 aa14.39□□□□□ -0.11
PABPC1-208ENST00000519004 TFAP2AP05549 437 aa14.39□□□□□ -0.11
PABPC1-208ENST00000519004 COL6A2P12110 1019 aa14.39□□□□□ -0.11
PABPC1-208ENST00000519004 CETN2P41208 172 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms