RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 FAM83GA6ND36 823 aa-0.42□□□□□ -2.48
SNORA40.16-201ENST00000517238 BTBD18B2RXH4 712 aa-0.42□□□□□ -2.48
SNORA40.16-201ENST00000517238 FZD9O00144 591 aa-0.42□□□□□ -2.48
SNORA40.16-201ENST00000517238 KRIT1O00522 736 aa-0.42□□□□□ -2.48
SNORA40.16-201ENST00000517238 SCAMP3O14828 347 aaKnown RBP-0.42□□□□□ -2.48
SNORA40.16-201ENST00000517238 PCDH17O14917 1159 aa-0.42□□□□□ -2.48
SNORA40.16-201ENST00000517238 TOX4O94842 621 aa-0.42□□□□□ -2.48
SNORA40.16-201ENST00000517238 VSIG10L2P0DP72 767 aa-0.42□□□□□ -2.48
SNORA40.16-201ENST00000517238 ZNF32P17041 273 aa-0.42□□□□□ -2.48
SNORA40.16-201ENST00000517238 ADPRHP54922 357 aa-0.42□□□□□ -2.48
SNORA40.16-201ENST00000517238 EGR4Q05215 589 aa-0.42□□□□□ -2.48
SNORA40.16-201ENST00000517238 SRSF1Q07955 248 aaKnown RBP eCLIP-0.42□□□□□ -2.48
SNORA40.16-201ENST00000517238 MTMR3Q13615 1198 aa-0.42□□□□□ -2.48
SNORA40.16-201ENST00000517238 MOGSQ13724 837 aa-0.42□□□□□ -2.48
SNORA40.16-201ENST00000517238 MLECQ14165 292 aa-0.42□□□□□ -2.48
SNORA40.16-201ENST00000517238 MAN2A1Q16706 1144 aa-0.42□□□□□ -2.48
SNORA40.16-201ENST00000517238 DGKDQ16760 1214 aa-0.42□□□□□ -2.48
SNORA40.16-201ENST00000517238 INF2Q27J81 1249 aa-0.42□□□□□ -2.48
SNORA40.16-201ENST00000517238 PRAMEF19Q5SWL8 479 aa-0.42□□□□□ -2.48
SNORA40.16-201ENST00000517238 DCAF15Q66K64 600 aa-0.42□□□□□ -2.48
SNORA40.16-201ENST00000517238 KIAA0895LQ68EN5 471 aa-0.42□□□□□ -2.48
SNORA40.16-201ENST00000517238 GRAMD4Q6IC98 578 aa-0.42□□□□□ -2.48
SNORA40.16-201ENST00000517238 ZNF774Q6NX45 483 aa-0.42□□□□□ -2.48
SNORA40.16-201ENST00000517238 FBXL19Q6PCT2 694 aa-0.42□□□□□ -2.48
SNORA40.16-201ENST00000517238 RSPH3Q86UC2 560 aa-0.42□□□□□ -2.48
SNORA40.16-201ENST00000517238 OAFQ86UD1 273 aa-0.42□□□□□ -2.48
SNORA40.16-201ENST00000517238 RBM12BQ8IXT5 1001 aaKnown RBP-0.42□□□□□ -2.48
SNORA40.16-201ENST00000517238 LNX2Q8N448 690 aa-0.42□□□□□ -2.48
SNORA40.16-201ENST00000517238 LINC00612Q8N6U2 182 aa-0.42□□□□□ -2.48
SNORA40.16-201ENST00000517238 C8orf58Q8NAV2 365 aa-0.42□□□□□ -2.48
SNORA40.16-201ENST00000517238 ZNF428Q96B54 188 aa-0.42□□□□□ -2.48
SNORA40.16-201ENST00000517238 FOXRED1Q96CU9 486 aaPredicted RBP-0.42□□□□□ -2.48
SNORA40.16-201ENST00000517238 TM6SF1Q9BZW5 370 aa-0.42□□□□□ -2.48
SNORA40.16-201ENST00000517238 KDM4CQ9H3R0 1056 aa-0.42□□□□□ -2.48
SNORA40.16-201ENST00000517238 VRTNQ9H8Y1 702 aa-0.42□□□□□ -2.48
SNORA40.16-201ENST00000517238 PAK5Q9P286 719 aa-0.42□□□□□ -2.48
SNORA40.16-201ENST00000517238 TFIP11Q9UBB9 837 aaKnown RBP-0.42□□□□□ -2.48
SNORA40.16-201ENST00000517238 TIMM13Q9Y5L4 95 aaPredicted RBP-0.42□□□□□ -2.48
SNORA40.16-201ENST00000517238 MEGF8Q7Z7M0 2845 aa-0.42□□□□□ -2.48
SNORA40.16-201ENST00000517238 ZMYM2Q9UBW7 1377 aa-0.43□□□□□ -2.48
SNORA40.16-201ENST00000517238 C2orf78A6NCI8 922 aa-0.43□□□□□ -2.48
SNORA40.16-201ENST00000517238 PRR5-ARHGAP8B1AHC4 643 aa-0.43□□□□□ -2.48
SNORA40.16-201ENST00000517238 BMPR1BO00238 502 aa-0.43□□□□□ -2.48
SNORA40.16-201ENST00000517238 FCHO1O14526 889 aa-0.43□□□□□ -2.48
SNORA40.16-201ENST00000517238 MPPED1O15442 326 aa-0.43□□□□□ -2.48
SNORA40.16-201ENST00000517238 BUB3O43684 328 aa-0.43□□□□□ -2.48
SNORA40.16-201ENST00000517238 IGKV3-11P04433 115 aa-0.43□□□□□ -2.48
SNORA40.16-201ENST00000517238 COL6A2P12110 1019 aa-0.43□□□□□ -2.48
SNORA40.16-201ENST00000517238 PLS3P13797 630 aa-0.43□□□□□ -2.48
SNORA40.16-201ENST00000517238 HOXA11P31270 313 aaPredicted RBP-0.43□□□□□ -2.48
SNORA40.16-201ENST00000517238 ARRB2P32121 409 aa-0.43□□□□□ -2.48
SNORA40.16-201ENST00000517238 GTF2A2P52657 109 aa-0.43□□□□□ -2.48
SNORA40.16-201ENST00000517238 SESN2P58004 480 aaPredicted RBP-0.43□□□□□ -2.48
SNORA40.16-201ENST00000517238 RPS26P62854 115 aaKnown RBP-0.43□□□□□ -2.48
SNORA40.16-201ENST00000517238 TUSC3Q13454 348 aa-0.43□□□□□ -2.48
SNORA40.16-201ENST00000517238 RFTN1Q14699 578 aaPredicted RBP-0.43□□□□□ -2.48
SNORA40.16-201ENST00000517238 AASDHQ4L235 1098 aaPredicted RBP-0.43□□□□□ -2.48
SNORA40.16-201ENST00000517238 STPG1Q5TH74 334 aa-0.43□□□□□ -2.48
SNORA40.16-201ENST00000517238 WBP2NLQ6ICG8 309 aa-0.43□□□□□ -2.48
SNORA40.16-201ENST00000517238 CYP4F22Q6NT55 531 aa-0.43□□□□□ -2.48
SNORA40.16-201ENST00000517238 ABHD15Q6UXT9 468 aa-0.43□□□□□ -2.48
SNORA40.16-201ENST00000517238 LRP11Q86VZ4 500 aa-0.43□□□□□ -2.48
SNORA40.16-201ENST00000517238 KIAA0825Q8IV33 1275 aa-0.43□□□□□ -2.48
SNORA40.16-201ENST00000517238 KLHDC8BQ8IXV7 354 aa-0.43□□□□□ -2.48
SNORA40.16-201ENST00000517238 CMTM4Q8IZR5 234 aa-0.43□□□□□ -2.48
SNORA40.16-201ENST00000517238 TMEM132CQ8N3T6 1108 aa-0.43□□□□□ -2.48
SNORA40.16-201ENST00000517238 CAMKK1Q8N5S9 505 aa-0.43□□□□□ -2.48
SNORA40.16-201ENST00000517238 PNLDC1Q8NA58 520 aaKnown RBP-0.43□□□□□ -2.48
SNORA40.16-201ENST00000517238 OR10H5Q8NGA6 315 aa-0.43□□□□□ -2.48
SNORA40.16-201ENST00000517238 ELP5Q8TE02 316 aa-0.43□□□□□ -2.48
SNORA40.16-201ENST00000517238 GFM2Q969S9 779 aaKnown RBP-0.43□□□□□ -2.48
SNORA40.16-201ENST00000517238 RFT1Q96AA3 541 aa-0.43□□□□□ -2.48
SNORA40.16-201ENST00000517238 FBXL20Q96IG2 436 aa-0.43□□□□□ -2.48
SNORA40.16-201ENST00000517238 NLRP4Q96MN2 994 aa-0.43□□□□□ -2.48
SNORA40.16-201ENST00000517238 MMP19Q99542 508 aa-0.43□□□□□ -2.48
SNORA40.16-201ENST00000517238 EPB41L1Q9H4G0 881 aa-0.43□□□□□ -2.48
SNORA40.16-201ENST00000517238 MVB12BQ9H7P6 319 aa-0.43□□□□□ -2.48
SNORA40.16-201ENST00000517238 GALNT9Q9HCQ5 603 aa-0.43□□□□□ -2.48
SNORA40.16-201ENST00000517238 ZBTB40Q9NUA8 1239 aa-0.43□□□□□ -2.48
SNORA40.16-201ENST00000517238 WNT16Q9UBV4 365 aa-0.43□□□□□ -2.48
SNORA40.16-201ENST00000517238 PCDHA7Q9UN72 937 aa-0.43□□□□□ -2.48
SNORA40.16-201ENST00000517238 EFR3BQ9Y2G0 817 aa-0.43□□□□□ -2.48
SNORA40.16-201ENST00000517238 DLGAP4Q9Y2H0 992 aa-0.43□□□□□ -2.48
SNORA40.16-201ENST00000517238 PRSS21Q9Y6M0 314 aa-0.43□□□□□ -2.48
SNORA40.16-201ENST00000517238 IGLV3-10A0A075B6K4 115 aa-0.44□□□□□ -2.48
SNORA40.16-201ENST00000517238 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP-0.44□□□□□ -2.48
SNORA40.16-201ENST00000517238 J3KR12 359 aa-0.44□□□□□ -2.48
SNORA40.16-201ENST00000517238 ASAP2O43150 1006 aa-0.44□□□□□ -2.48
SNORA40.16-201ENST00000517238 LMX1BO60663 402 aa-0.44□□□□□ -2.48
SNORA40.16-201ENST00000517238 VAMP4O75379 141 aa-0.44□□□□□ -2.48
SNORA40.16-201ENST00000517238 JTBO76095 146 aa-0.44□□□□□ -2.48
SNORA40.16-201ENST00000517238 C4BPAP04003 597 aaKnown RBP-0.44□□□□□ -2.48
SNORA40.16-201ENST00000517238 JUNP05412 331 aaKnown RBP-0.44□□□□□ -2.48
SNORA40.16-201ENST00000517238 ARL14EPLP0DKL9 152 aa-0.44□□□□□ -2.48
SNORA40.16-201ENST00000517238 ITGA4P13612 1032 aa-0.44□□□□□ -2.48
SNORA40.16-201ENST00000517238 CCNFP41002 786 aa-0.44□□□□□ -2.48
SNORA40.16-201ENST00000517238 TLE4Q04727 773 aa-0.44□□□□□ -2.48
SNORA40.16-201ENST00000517238 TEFQ10587 303 aa-0.44□□□□□ -2.48
SNORA40.16-201ENST00000517238 DMP1Q13316 513 aaPredicted RBP-0.44□□□□□ -2.48
SNORA40.16-201ENST00000517238 STILQ15468 1287 aa-0.44□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms