RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 PODNL1Q6PEZ8 512 aa3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 BORAQ6PGQ7 559 aa3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 PI16Q6UXB8 463 aa3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 SYT13Q7L8C5 426 aa3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 CHST3Q7LGC8 479 aa3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 TMEM173Q86WV6 379 aaPredicted RBP3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 DZIP1Q86YF9 867 aaKnown RBP3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 LRRC47Q8N1G4 583 aaKnown RBP3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 CACTIN-AS1Q8N1I8 211 aa3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 UBR7Q8N806 425 aa3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 DCBLD1Q8N8Z6 715 aa3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 TSTD1Q8NFU3 115 aa3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 USP33Q8TEY7 942 aa3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 SPACA7Q96KW9 195 aa3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 PLEKHF1Q96S99 279 aa3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 PUS3Q9BZE2 481 aaKnown RBP3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 RAVER2Q9HCJ3 691 aaKnown RBP3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 A1CFQ9NQ94 594 aaKnown RBP3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 HOMER2Q9NSB8 354 aa3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 GJB4Q9NTQ9 266 aa3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 PALD1Q9ULE6 856 aa3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 CHMP3Q9Y3E7 222 aa3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 PRRC2AP48634 2157 aaKnown RBP3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 VWA8A3KMH1 1905 aa3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 DLG5Q8TDM6 1919 aa3.8□□□□□ -1.8
SCARNA13-201ENST00000516672 ESPL1Q14674 2120 aa3.79□□□□□ -1.8
SCARNA13-201ENST00000516672 FANCIQ9NVI1 1328 aa3.79□□□□□ -1.8
SCARNA13-201ENST00000516672 DOCK6Q96HP0 2047 aa3.79□□□□□ -1.8
SCARNA13-201ENST00000516672 PRR19A6NJB7 356 aa3.79□□□□□ -1.8
SCARNA13-201ENST00000516672 TCP11X1B4DZS4 312 aa3.79□□□□□ -1.8
SCARNA13-201ENST00000516672 CBX4O00257 560 aa3.79□□□□□ -1.8
SCARNA13-201ENST00000516672 ENC1O14682 589 aa3.79□□□□□ -1.8
SCARNA13-201ENST00000516672 ATP2A1O14983 1001 aa3.79□□□□□ -1.8
SCARNA13-201ENST00000516672 PHF1O43189 567 aaPredicted RBP3.79□□□□□ -1.8
SCARNA13-201ENST00000516672 VENTXO95231 258 aa3.79□□□□□ -1.8
SCARNA13-201ENST00000516672 ARIH2O95376 493 aa3.79□□□□□ -1.8
SCARNA13-201ENST00000516672 VAV1P15498 845 aa3.79□□□□□ -1.8
SCARNA13-201ENST00000516672 SLC6A4P31645 630 aa3.79□□□□□ -1.8
SCARNA13-201ENST00000516672 MATKP42679 507 aa3.79□□□□□ -1.8
SCARNA13-201ENST00000516672 GRK6P43250 576 aa3.79□□□□□ -1.8
SCARNA13-201ENST00000516672 IST1P53990 364 aa3.79□□□□□ -1.8
SCARNA13-201ENST00000516672 FOXO4P98177 505 aa3.79□□□□□ -1.8
SCARNA13-201ENST00000516672 CALD1Q05682 793 aaKnown RBP3.79□□□□□ -1.8
SCARNA13-201ENST00000516672 ZNF33AQ06730 810 aa3.79□□□□□ -1.8
SCARNA13-201ENST00000516672 MGAT3Q09327 533 aa3.79□□□□□ -1.8
SCARNA13-201ENST00000516672 SCRN1Q12765 414 aa3.79□□□□□ -1.8
SCARNA13-201ENST00000516672 SF3A1Q15459 793 aaKnown RBP3.79□□□□□ -1.8
SCARNA13-201ENST00000516672 CERKLQ49MI3 558 aaPredicted RBP3.79□□□□□ -1.8
SCARNA13-201ENST00000516672 KIAA0895LQ68EN5 471 aa3.79□□□□□ -1.8
SCARNA13-201ENST00000516672 LMBR1LQ6UX01 489 aa3.79□□□□□ -1.8
SCARNA13-201ENST00000516672 VITQ6UXI7 678 aa3.79□□□□□ -1.8
SCARNA13-201ENST00000516672 KANSL1Q7Z3B3 1105 aa3.79□□□□□ -1.8
SCARNA13-201ENST00000516672 RASSF3Q86WH2 238 aa3.79□□□□□ -1.8
SCARNA13-201ENST00000516672 RALGPS2Q86X27 583 aaPredicted RBP3.79□□□□□ -1.8
SCARNA13-201ENST00000516672 TEX11Q8IYF3 940 aa3.79□□□□□ -1.8
SCARNA13-201ENST00000516672 LRRC43Q8N309 656 aa3.79□□□□□ -1.8
SCARNA13-201ENST00000516672 Q8NA96 180 aa3.79□□□□□ -1.8
SCARNA13-201ENST00000516672 MDGA1Q8NFP4 955 aa3.79□□□□□ -1.8
SCARNA13-201ENST00000516672 OLIG1Q8TAK6 271 aa3.79□□□□□ -1.8
SCARNA13-201ENST00000516672 EPS8L1Q8TE68 723 aa3.79□□□□□ -1.8
SCARNA13-201ENST00000516672 GPKOWQ92917 476 aaPredicted RBP eCLIP3.79□□□□□ -1.8
SCARNA13-201ENST00000516672 CNOT6LQ96LI5 555 aaKnown RBP3.79□□□□□ -1.8
SCARNA13-201ENST00000516672 DDX50Q9BQ39 737 aaKnown RBP3.79□□□□□ -1.8
SCARNA13-201ENST00000516672 CHMP4AQ9BY43 222 aa3.79□□□□□ -1.8
SCARNA13-201ENST00000516672 POLR1BQ9H9Y6 1135 aa3.79□□□□□ -1.8
SCARNA13-201ENST00000516672 KCND3Q9UK17 655 aa3.79□□□□□ -1.8
SCARNA13-201ENST00000516672 CEP131Q9UPN4 1083 aa3.79□□□□□ -1.8
SCARNA13-201ENST00000516672 PCDHGA4Q9Y5G9 962 aa3.79□□□□□ -1.8
SCARNA13-201ENST00000516672 FAM171A2A8MVW0 826 aa3.78□□□□□ -1.8
SCARNA13-201ENST00000516672 SEMA3EO15041 775 aa3.78□□□□□ -1.8
SCARNA13-201ENST00000516672 AP5Z1O43299 807 aa3.78□□□□□ -1.8
SCARNA13-201ENST00000516672 USP12O75317 370 aa3.78□□□□□ -1.8
SCARNA13-201ENST00000516672 ADH1AP07327 375 aa3.78□□□□□ -1.8
SCARNA13-201ENST00000516672 EGR1P18146 543 aa3.78□□□□□ -1.8
SCARNA13-201ENST00000516672 HOXC8P31273 242 aa3.78□□□□□ -1.8
SCARNA13-201ENST00000516672 ACADVLP49748 655 aa3.78□□□□□ -1.8
SCARNA13-201ENST00000516672 DUSP3P51452 185 aaPredicted RBP3.78□□□□□ -1.8
SCARNA13-201ENST00000516672 BCAR1P56945 870 aa3.78□□□□□ -1.8
SCARNA13-201ENST00000516672 ASIC1P78348 528 aa3.78□□□□□ -1.8
SCARNA13-201ENST00000516672 NRG1Q02297 640 aaPredicted RBP3.78□□□□□ -1.8
SCARNA13-201ENST00000516672 ARHGAP1Q07960 439 aa3.78□□□□□ -1.8
SCARNA13-201ENST00000516672 ST3GAL1Q11201 340 aa3.78□□□□□ -1.8
SCARNA13-201ENST00000516672 ZRSR2Q15696 482 aaKnown RBP3.78□□□□□ -1.8
SCARNA13-201ENST00000516672 CCDC27Q2M243 656 aa3.78□□□□□ -1.8
SCARNA13-201ENST00000516672 HLA-BQ31612 363 aa3.78□□□□□ -1.8
SCARNA13-201ENST00000516672 KRTAP24-1Q3LI83 254 aa3.78□□□□□ -1.8
SCARNA13-201ENST00000516672 MIDNQ504T8 468 aa3.78□□□□□ -1.8
SCARNA13-201ENST00000516672 LACTB2Q53H82 288 aaPredicted RBP3.78□□□□□ -1.8
SCARNA13-201ENST00000516672 TTC30AQ86WT1 665 aa3.78□□□□□ -1.8
SCARNA13-201ENST00000516672 SIRT2Q8IXJ6 389 aa3.78□□□□□ -1.8
SCARNA13-201ENST00000516672 PLD6Q8N2A8 252 aaKnown RBP3.78□□□□□ -1.8
SCARNA13-201ENST00000516672 VGLL2Q8N8G2 317 aa3.78□□□□□ -1.8
SCARNA13-201ENST00000516672 TEX19Q8NA77 164 aa3.78□□□□□ -1.8
SCARNA13-201ENST00000516672 RPLP0P6Q8NHW5 317 aa3.78□□□□□ -1.8
SCARNA13-201ENST00000516672 SCFD2Q8WU76 684 aa3.78□□□□□ -1.8
SCARNA13-201ENST00000516672 CASD1Q96PB1 797 aa3.78□□□□□ -1.8
SCARNA13-201ENST00000516672 VN1R3Q9BXE9 311 aa3.78□□□□□ -1.8
SCARNA13-201ENST00000516672 TMEM117Q9H0C3 514 aa3.78□□□□□ -1.8
SCARNA13-201ENST00000516672 CDT1Q9H211 546 aa3.78□□□□□ -1.8
SCARNA13-201ENST00000516672 PLEKHA4Q9H4M7 779 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms