RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 PDZD7Q9H5P4 517 aa9.9□□□□□ -0.82
CPNE4-213ENST00000515418 CPSF3Q9UKF6 684 aaKnown RBP9.9□□□□□ -0.82
CPNE4-213ENST00000515418 COQ4Q9Y3A0 265 aa9.9□□□□□ -0.82
CPNE4-213ENST00000515418 R3HCC1Q9Y3T6 440 aaKnown RBP9.9□□□□□ -0.82
CPNE4-213ENST00000515418 DUSP10Q9Y6W6 482 aa9.9□□□□□ -0.82
CPNE4-213ENST00000515418 SCN10AQ9Y5Y9 1956 aa9.9□□□□□ -0.82
CPNE4-213ENST00000515418 F8VZ95 297 aa9.9□□□□□ -0.83
CPNE4-213ENST00000515418 FANCGO15287 622 aa9.9□□□□□ -0.83
CPNE4-213ENST00000515418 PMM2O15305 246 aa9.9□□□□□ -0.83
CPNE4-213ENST00000515418 MEFVO15553 781 aaPredicted RBP9.9□□□□□ -0.83
CPNE4-213ENST00000515418 KPNA6O60684 536 aa9.9□□□□□ -0.83
CPNE4-213ENST00000515418 ERLIN2O94905 339 aa9.9□□□□□ -0.83
CPNE4-213ENST00000515418 VNN1O95497 513 aa9.9□□□□□ -0.83
CPNE4-213ENST00000515418 CST3P01034 146 aaPredicted RBP9.9□□□□□ -0.83
CPNE4-213ENST00000515418 MYCP01106 439 aaPredicted RBP9.9□□□□□ -0.83
CPNE4-213ENST00000515418 HOXA11P31270 313 aaPredicted RBP9.9□□□□□ -0.83
CPNE4-213ENST00000515418 GTF2H1P32780 548 aa9.9□□□□□ -0.83
CPNE4-213ENST00000515418 CYLC1P35663 651 aaPredicted RBP9.9□□□□□ -0.83
CPNE4-213ENST00000515418 BIRC3Q13489 604 aa9.9□□□□□ -0.83
CPNE4-213ENST00000515418 ASTE1Q2TB18 679 aaPredicted RBP9.9□□□□□ -0.83
CPNE4-213ENST00000515418 SPOPLQ6IQ16 392 aa9.9□□□□□ -0.83
CPNE4-213ENST00000515418 C15orf39Q6ZRI6 1047 aa9.9□□□□□ -0.83
CPNE4-213ENST00000515418 PPM1KQ8N3J5 372 aa9.9□□□□□ -0.83
CPNE4-213ENST00000515418 KLHDC9Q8NEP7 349 aa9.9□□□□□ -0.83
CPNE4-213ENST00000515418 WNT8BQ93098 351 aa9.9□□□□□ -0.83
CPNE4-213ENST00000515418 VTI1AQ96AJ9 217 aa9.9□□□□□ -0.83
CPNE4-213ENST00000515418 KREMEN1Q96MU8 473 aa9.9□□□□□ -0.83
CPNE4-213ENST00000515418 LACRTQ9GZZ8 138 aa9.9□□□□□ -0.83
CPNE4-213ENST00000515418 ADAMTS1Q9UHI8 967 aa9.9□□□□□ -0.83
CPNE4-213ENST00000515418 FBXL5Q9UKA1 691 aa9.9□□□□□ -0.83
CPNE4-213ENST00000515418 A0A087X0T9 212 aa9.89□□□□□ -0.83
CPNE4-213ENST00000515418 A0A1B0GUA9 196 aa9.89□□□□□ -0.83
CPNE4-213ENST00000515418 EIF3CLB5ME19 914 aaKnown RBP9.89□□□□□ -0.83
CPNE4-213ENST00000515418 CCP110O43303 1012 aa9.89□□□□□ -0.83
CPNE4-213ENST00000515418 HLA-DRAP01903 254 aa9.89□□□□□ -0.83
CPNE4-213ENST00000515418 INHAP05111 366 aa9.89□□□□□ -0.83
CPNE4-213ENST00000515418 FAM228BP0C875 321 aa9.89□□□□□ -0.83
CPNE4-213ENST00000515418 STAG3L1P0CL83 205 aa9.89□□□□□ -0.83
CPNE4-213ENST00000515418 CXCL8P10145 99 aa9.89□□□□□ -0.83
CPNE4-213ENST00000515418 SOX5P35711 763 aa9.89□□□□□ -0.83
CPNE4-213ENST00000515418 USP8P40818 1118 aa9.89□□□□□ -0.83
CPNE4-213ENST00000515418 STAT1P42224 750 aa9.89□□□□□ -0.83
CPNE4-213ENST00000515418 ARHGAP25P42331 645 aa9.89□□□□□ -0.83
CPNE4-213ENST00000515418 ZACNQ401N2 412 aa9.89□□□□□ -0.83
CPNE4-213ENST00000515418 MAP3K21Q5TCX8 1036 aa9.89□□□□□ -0.83
CPNE4-213ENST00000515418 CCSAPQ6IQ19 270 aaPredicted RBP9.89□□□□□ -0.83
CPNE4-213ENST00000515418 CATSPER4Q7RTX7 472 aa9.89□□□□□ -0.83
CPNE4-213ENST00000515418 SRGAP1Q7Z6B7 1085 aa9.89□□□□□ -0.83
CPNE4-213ENST00000515418 ZNF410Q86VK4 478 aa9.89□□□□□ -0.83
CPNE4-213ENST00000515418 BRSK2Q8IWQ3 736 aa9.89□□□□□ -0.83
CPNE4-213ENST00000515418 HELQQ8TDG4 1101 aa9.89□□□□□ -0.83
CPNE4-213ENST00000515418 ERO1AQ96HE7 468 aa9.89□□□□□ -0.83
CPNE4-213ENST00000515418 WDR24Q96S15 920 aa9.89□□□□□ -0.83
CPNE4-213ENST00000515418 EIF3CQ99613 913 aaKnown RBP9.89□□□□□ -0.83
CPNE4-213ENST00000515418 GCOM2Q9BZD3 368 aaPredicted RBP9.89□□□□□ -0.83
CPNE4-213ENST00000515418 CXCL16Q9H2A7 254 aa9.89□□□□□ -0.83
CPNE4-213ENST00000515418 ACP6Q9NPH0 428 aa9.89□□□□□ -0.83
CPNE4-213ENST00000515418 GUCA1BQ9UMX6 200 aa9.89□□□□□ -0.83
CPNE4-213ENST00000515418 MYH10P35580 1976 aa9.89□□□□□ -0.83
CPNE4-213ENST00000515418 GRIN2DO15399 1336 aa9.89□□□□□ -0.83
CPNE4-213ENST00000515418 MKI67P46013 3256 aaKnown RBP9.89□□□□□ -0.83
CPNE4-213ENST00000515418 ANK1P16157 1881 aa9.89□□□□□ -0.83
CPNE4-213ENST00000515418 EVI5O60447 810 aa9.88□□□□□ -0.83
CPNE4-213ENST00000515418 CALCAP01258 141 aa9.88□□□□□ -0.83
CPNE4-213ENST00000515418 GNAT1P11488 350 aa9.88□□□□□ -0.83
CPNE4-213ENST00000515418 DARSP14868 501 aaKnown RBP9.88□□□□□ -0.83
CPNE4-213ENST00000515418 EIF4BP23588 611 aaKnown RBP9.88□□□□□ -0.83
CPNE4-213ENST00000515418 HOXC8P31273 242 aa9.88□□□□□ -0.83
CPNE4-213ENST00000515418 GNG11P61952 73 aa9.88□□□□□ -0.83
CPNE4-213ENST00000515418 ETF1P62495 437 aaKnown RBP9.88□□□□□ -0.83
CPNE4-213ENST00000515418 TFAMQ00059 246 aaKnown RBP9.88□□□□□ -0.83
CPNE4-213ENST00000515418 MAPK8IP2Q13387 824 aaPredicted RBP9.88□□□□□ -0.83
CPNE4-213ENST00000515418 SPA17Q15506 151 aa9.88□□□□□ -0.83
CPNE4-213ENST00000515418 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.88□□□□□ -0.83
CPNE4-213ENST00000515418 PXYLP1Q8TE99 480 aa9.88□□□□□ -0.83
CPNE4-213ENST00000515418 SH3TC2Q8TF17 1288 aa9.88□□□□□ -0.83
CPNE4-213ENST00000515418 DHX38Q92620 1227 aaKnown RBP9.88□□□□□ -0.83
CPNE4-213ENST00000515418 PRIMPOLQ96LW4 560 aa9.88□□□□□ -0.83
CPNE4-213ENST00000515418 CGRRF1Q99675 332 aa9.88□□□□□ -0.83
CPNE4-213ENST00000515418 ARID3AQ99856 593 aa9.88□□□□□ -0.83
CPNE4-213ENST00000515418 MTMR12Q9C0I1 747 aa9.88□□□□□ -0.83
CPNE4-213ENST00000515418 RNF19AQ9NV58 838 aa9.88□□□□□ -0.83
CPNE4-213ENST00000515418 DDX20Q9UHI6 824 aaKnown RBP9.88□□□□□ -0.83
CPNE4-213ENST00000515418 GTF2IRD1Q9UHL9 959 aa9.88□□□□□ -0.83
CPNE4-213ENST00000515418 DNAI1Q9UI46 699 aa9.88□□□□□ -0.83
CPNE4-213ENST00000515418 HES2Q9Y543 173 aa9.88□□□□□ -0.83
CPNE4-213ENST00000515418 TRIM17Q9Y577 477 aa9.88□□□□□ -0.83
CPNE4-213ENST00000515418 PCDHA13Q9Y5I0 950 aa9.88□□□□□ -0.83
CPNE4-213ENST00000515418 PTCH2Q9Y6C5 1203 aa9.88□□□□□ -0.83
CPNE4-213ENST00000515418 LACTBL1A8MY62 500 aa9.88□□□□□ -0.83
CPNE4-213ENST00000515418 PHACTR2O75167 634 aa9.88□□□□□ -0.83
CPNE4-213ENST00000515418 PIK3CAP42336 1068 aa9.88□□□□□ -0.83
CPNE4-213ENST00000515418 KRT83P78385 493 aa9.88□□□□□ -0.83
CPNE4-213ENST00000515418 SNX17Q15036 470 aa9.88□□□□□ -0.83
CPNE4-213ENST00000515418 ARHGAP29Q52LW3 1261 aa9.88□□□□□ -0.83
CPNE4-213ENST00000515418 CCDC122Q5T0U0 273 aa9.88□□□□□ -0.83
CPNE4-213ENST00000515418 LHX8Q68G74 356 aa9.88□□□□□ -0.83
CPNE4-213ENST00000515418 KIAA1328Q86T90 577 aa9.88□□□□□ -0.83
CPNE4-213ENST00000515418 EFCAB13Q8IY85 973 aa9.88□□□□□ -0.83
CPNE4-213ENST00000515418 NT5C1BQ96P26 610 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms