RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 TRIP11Q15643 1979 aa22.81■■□□□ 1.24
LSM6-207ENST00000515311 MEIS3P2A8K0S8 358 aa22.8■■□□□ 1.24
LSM6-207ENST00000515311 BECN2A8MW95 431 aa22.8■■□□□ 1.24
LSM6-207ENST00000515311 INPPL1O15357 1258 aa22.8■■□□□ 1.24
LSM6-207ENST00000515311 MEFVO15553 781 aaPredicted RBP22.8■■□□□ 1.24
LSM6-207ENST00000515311 MCCD1P59942 119 aaPredicted RBP22.8■■□□□ 1.24
LSM6-207ENST00000515311 DEFB103AP81534 67 aa22.8■■□□□ 1.24
LSM6-207ENST00000515311 PPP2R3AQ06190 1150 aa22.8■■□□□ 1.24
LSM6-207ENST00000515311 PSMD6Q15008 389 aa22.8■■□□□ 1.24
LSM6-207ENST00000515311 XKR4Q5GH76 650 aa22.8■■□□□ 1.24
LSM6-207ENST00000515311 CDKAL1Q5VV42 579 aa22.8■■□□□ 1.24
LSM6-207ENST00000515311 GLB1LQ6UWU2 654 aa22.8■■□□□ 1.24
LSM6-207ENST00000515311 ALKAL1Q6UXT8 129 aa22.8■■□□□ 1.24
LSM6-207ENST00000515311 FRMD5Q7Z6J6 570 aa22.8■■□□□ 1.24
LSM6-207ENST00000515311 IRF2BP1Q8IU81 584 aa22.8■■□□□ 1.24
LSM6-207ENST00000515311 CD302Q8IX05 232 aa22.8■■□□□ 1.24
LSM6-207ENST00000515311 BORCS6Q96GS4 357 aa22.8■■□□□ 1.24
LSM6-207ENST00000515311 TSPAN18Q96SJ8 248 aa22.8■■□□□ 1.24
LSM6-207ENST00000515311 ASB7Q9H672 318 aa22.8■■□□□ 1.24
LSM6-207ENST00000515311 METTL14Q9HCE5 456 aaKnown RBP22.8■■□□□ 1.24
LSM6-207ENST00000515311 ZBBXA8MT70 800 aa22.79■■□□□ 1.24
LSM6-207ENST00000515311 SURF1Q15526 300 aa22.79■■□□□ 1.24
LSM6-207ENST00000515311 USP37Q86T82 979 aa22.79■■□□□ 1.24
LSM6-207ENST00000515311 TMC2Q8TDI7 906 aa22.79■■□□□ 1.24
LSM6-207ENST00000515311 SLC9A7Q96T83 725 aa22.79■■□□□ 1.24
LSM6-207ENST00000515311 SAMSN1Q9NSI8 373 aaKnown RBP22.79■■□□□ 1.24
LSM6-207ENST00000515311 RNF19AQ9NV58 838 aa22.79■■□□□ 1.24
LSM6-207ENST00000515311 FANCLQ9NW38 375 aa22.79■■□□□ 1.24
LSM6-207ENST00000515311 CXXC1Q9P0U4 656 aaPredicted RBP22.79■■□□□ 1.24
LSM6-207ENST00000515311 CNTN3Q9P232 1028 aa22.79■■□□□ 1.24
LSM6-207ENST00000515311 ARMCX3Q9UH62 379 aaPredicted RBP22.79■■□□□ 1.24
LSM6-207ENST00000515311 SLC4A7Q9Y6M7 1214 aa22.79■■□□□ 1.24
LSM6-207ENST00000515311 FNDC1Q4ZHG4 1894 aaPredicted RBP22.79■■□□□ 1.24
LSM6-207ENST00000515311 ARL5CA6NH57 179 aa22.78■■□□□ 1.24
LSM6-207ENST00000515311 KRT13P13646 458 aa22.78■■□□□ 1.24
LSM6-207ENST00000515311 IBSPP21815 317 aaPredicted RBP22.78■■□□□ 1.24
LSM6-207ENST00000515311 MLH1P40692 756 aa22.78■■□□□ 1.24
LSM6-207ENST00000515311 BFSP1Q12934 665 aa22.78■■□□□ 1.24
LSM6-207ENST00000515311 CCDC40Q4G0X9 1142 aa22.78■■□□□ 1.24
LSM6-207ENST00000515311 CLLU1OSQ5K130 101 aa22.78■■□□□ 1.24
LSM6-207ENST00000515311 LUZP1Q86V48 1076 aa22.78■■□□□ 1.24
LSM6-207ENST00000515311 PHOSPHO2Q8TCD6 241 aa22.78■■□□□ 1.24
LSM6-207ENST00000515311 CNOT6LQ96LI5 555 aaKnown RBP22.78■■□□□ 1.24
LSM6-207ENST00000515311 UBE2OQ9C0C9 1292 aaKnown RBP22.78■■□□□ 1.24
LSM6-207ENST00000515311 HSD3B7Q9H2F3 369 aa22.78■■□□□ 1.24
LSM6-207ENST00000515311 MAGEC2Q9UBF1 373 aaPredicted RBP22.78■■□□□ 1.24
LSM6-207ENST00000515311 DERAQ9Y315 318 aa22.78■■□□□ 1.24
LSM6-207ENST00000515311 TDRD15B5MCY1 1934 aaKnown RBP22.78■■□□□ 1.24
LSM6-207ENST00000515311 LACTBL1A8MY62 500 aa22.77■■□□□ 1.24
LSM6-207ENST00000515311 OFD1O75665 1012 aa22.77■■□□□ 1.24
LSM6-207ENST00000515311 FGFR1P11362 822 aa22.77■■□□□ 1.24
LSM6-207ENST00000515311 KCNE1P15382 129 aa22.77■■□□□ 1.24
LSM6-207ENST00000515311 ZNF18P17022 549 aa22.77■■□□□ 1.24
LSM6-207ENST00000515311 EEF1GP26641 437 aaKnown RBP22.77■■□□□ 1.24
LSM6-207ENST00000515311 BMP8BP34820 402 aa22.77■■□□□ 1.24
LSM6-207ENST00000515311 CLDN10P78369 228 aa22.77■■□□□ 1.24
LSM6-207ENST00000515311 PARD3BQ8TEW8 1205 aa22.77■■□□□ 1.24
LSM6-207ENST00000515311 GAD1Q99259 594 aa22.77■■□□□ 1.24
LSM6-207ENST00000515311 PDE11AQ9HCR9 933 aa22.77■■□□□ 1.24
LSM6-207ENST00000515311 KLK14Q9P0G3 267 aa22.77■■□□□ 1.24
LSM6-207ENST00000515311 COL4A6Q14031 1691 aa22.77■■□□□ 1.24
LSM6-207ENST00000515311 GOLGA6L19H0YKK7 550 aa22.76■■□□□ 1.23
LSM6-207ENST00000515311 DGKIO75912 1065 aa22.76■■□□□ 1.23
LSM6-207ENST00000515311 VAMP7P51809 220 aa22.76■■□□□ 1.23
LSM6-207ENST00000515311 TPM4P67936 248 aa22.76■■□□□ 1.23
LSM6-207ENST00000515311 SPAG1Q07617 926 aa22.76■■□□□ 1.23
LSM6-207ENST00000515311 TCP11X2Q5H9J9 407 aa22.76■■□□□ 1.23
LSM6-207ENST00000515311 C9orf50Q5SZB4 431 aa22.76■■□□□ 1.23
LSM6-207ENST00000515311 NT5DC4Q86YG4 428 aa22.76■■□□□ 1.23
LSM6-207ENST00000515311 TRIM59Q8IWR1 403 aa22.76■■□□□ 1.23
LSM6-207ENST00000515311 ABI1Q8IZP0 508 aa22.76■■□□□ 1.23
LSM6-207ENST00000515311 GSTCDQ8NEC7 633 aa22.76■■□□□ 1.23
LSM6-207ENST00000515311 URGCPQ8TCY9 931 aa22.76■■□□□ 1.23
LSM6-207ENST00000515311 ZFP42Q96MM3 310 aa22.76■■□□□ 1.23
LSM6-207ENST00000515311 RPS6KC1Q96S38 1066 aa22.76■■□□□ 1.23
LSM6-207ENST00000515311 TMEM117Q9H0C3 514 aa22.76■■□□□ 1.23
LSM6-207ENST00000515311 C2CD2Q9Y426 696 aa22.76■■□□□ 1.23
LSM6-207ENST00000515311 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.76■■□□□ 1.23
LSM6-207ENST00000515311 KCNJ18B7U540 433 aa22.75■■□□□ 1.23
LSM6-207ENST00000515311 PTGESO14684 152 aa22.75■■□□□ 1.23
LSM6-207ENST00000515311 UPP2O95045 317 aa22.75■■□□□ 1.23
LSM6-207ENST00000515311 WNT7BP56706 349 aa22.75■■□□□ 1.23
LSM6-207ENST00000515311 KCNJ12Q14500 433 aa22.75■■□□□ 1.23
LSM6-207ENST00000515311 SHHQ15465 462 aa22.75■■□□□ 1.23
LSM6-207ENST00000515311 NOMO2Q5JPE7 1267 aa22.75■■□□□ 1.23
LSM6-207ENST00000515311 WDR49Q8IV35 697 aa22.75■■□□□ 1.23
LSM6-207ENST00000515311 PLEKHO2Q8TD55 490 aa22.75■■□□□ 1.23
LSM6-207ENST00000515311 HELQQ8TDG4 1101 aa22.75■■□□□ 1.23
LSM6-207ENST00000515311 CCDC127Q96BQ5 260 aa22.75■■□□□ 1.23
LSM6-207ENST00000515311 FAM212AQ96EL1 285 aa22.75■■□□□ 1.23
LSM6-207ENST00000515311 RNPC3Q96LT9 517 aaKnown RBP22.75■■□□□ 1.23
LSM6-207ENST00000515311 FNBP1Q96RU3 617 aa22.75■■□□□ 1.23
LSM6-207ENST00000515311 CGRRF1Q99675 332 aa22.75■■□□□ 1.23
LSM6-207ENST00000515311 KANSL3Q9P2N6 904 aa22.75■■□□□ 1.23
LSM6-207ENST00000515311 SMIM28A0A1B0GU29 152 aa22.74■■□□□ 1.23
LSM6-207ENST00000515311 GJB5O95377 273 aa22.74■■□□□ 1.23
LSM6-207ENST00000515311 ATP2A2P16615 1042 aaKnown RBP22.74■■□□□ 1.23
LSM6-207ENST00000515311 GRIK3Q13003 919 aa22.74■■□□□ 1.23
LSM6-207ENST00000515311 TMEM132DQ14C87 1099 aa22.74■■□□□ 1.23
LSM6-207ENST00000515311 JADE1Q6IE81 842 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms