RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 SUFUQ9UMX1 484 aa16.95■□□□□ 0.3
TRIM41-207ENST00000515223 ROR1Q01973 937 aa16.94■□□□□ 0.3
TRIM41-207ENST00000515223 MORF4L2Q15014 288 aa16.94■□□□□ 0.3
TRIM41-207ENST00000515223 SH2D3CQ8N5H7 860 aa16.94■□□□□ 0.3
TRIM41-207ENST00000515223 GPRC5AQ8NFJ5 357 aa16.94■□□□□ 0.3
TRIM41-207ENST00000515223 MORC4Q8TE76 937 aa16.94■□□□□ 0.3
TRIM41-207ENST00000515223 FOPNLQ96NB1 174 aa16.94■□□□□ 0.3
TRIM41-207ENST00000515223 NEUROG2Q9H2A3 272 aa16.94■□□□□ 0.3
TRIM41-207ENST00000515223 PLEKHA5Q9HAU0 1116 aa16.94■□□□□ 0.3
TRIM41-207ENST00000515223 APOBEC2Q9Y235 224 aaKnown RBP16.94■□□□□ 0.3
TRIM41-207ENST00000515223 GSG1L2A8MUP6 293 aa16.94■□□□□ 0.3
TRIM41-207ENST00000515223 LCP1P13796 627 aa16.94■□□□□ 0.3
TRIM41-207ENST00000515223 HDLBPQ00341 1268 aaKnown RBP16.94■□□□□ 0.3
TRIM41-207ENST00000515223 C12orf60Q5U649 245 aa16.94■□□□□ 0.3
TRIM41-207ENST00000515223 GUF1Q8N442 669 aaKnown RBP16.94■□□□□ 0.3
TRIM41-207ENST00000515223 CCNYL1Q8N7R7 359 aa16.94■□□□□ 0.3
TRIM41-207ENST00000515223 SLC16A10Q8TF71 515 aa16.94■□□□□ 0.3
TRIM41-207ENST00000515223 OCM2P0CE71 109 aa16.94■□□□□ 0.3
TRIM41-207ENST00000515223 OCMP0CE72 109 aaPredicted RBP16.94■□□□□ 0.3
TRIM41-207ENST00000515223 RPS12P25398 132 aaKnown RBP16.94■□□□□ 0.3
TRIM41-207ENST00000515223 WDR72Q3MJ13 1102 aa16.94■□□□□ 0.3
TRIM41-207ENST00000515223 NOA1Q8NC60 698 aaKnown RBP16.94■□□□□ 0.3
TRIM41-207ENST00000515223 AGAP1Q9UPQ3 857 aa16.94■□□□□ 0.3
TRIM41-207ENST00000515223 DAGLAQ9Y4D2 1042 aa16.94■□□□□ 0.3
TRIM41-207ENST00000515223 ATICP31939 592 aa16.94■□□□□ 0.3
TRIM41-207ENST00000515223 BEND6Q5SZJ8 279 aaPredicted RBP16.94■□□□□ 0.3
TRIM41-207ENST00000515223 GLT1D1Q96MS3 346 aa16.94■□□□□ 0.3
TRIM41-207ENST00000515223 TSSK1BQ9BXA7 367 aa16.94■□□□□ 0.3
TRIM41-207ENST00000515223 SMARCAL1Q9NZC9 954 aa16.94■□□□□ 0.3
TRIM41-207ENST00000515223 DFFAO00273 331 aa16.93■□□□□ 0.3
TRIM41-207ENST00000515223 TDP2O95551 362 aa16.93■□□□□ 0.3
TRIM41-207ENST00000515223 FAM117BQ6P1L5 589 aa16.93■□□□□ 0.3
TRIM41-207ENST00000515223 RASGRP2Q7LDG7 609 aa16.93■□□□□ 0.3
TRIM41-207ENST00000515223 NLRP14Q86W24 1093 aa16.93■□□□□ 0.3
TRIM41-207ENST00000515223 ZNF512Q96ME7 567 aaPredicted RBP16.93■□□□□ 0.3
TRIM41-207ENST00000515223 POLR3CQ9BUI4 534 aaPredicted RBP16.93■□□□□ 0.3
TRIM41-207ENST00000515223 ASPSCR1Q9BZE9 553 aa16.93■□□□□ 0.3
TRIM41-207ENST00000515223 L2HGDHQ9H9P8 463 aa16.93■□□□□ 0.3
TRIM41-207ENST00000515223 CASS4Q9NQ75 786 aa16.93■□□□□ 0.3
TRIM41-207ENST00000515223 ZNF70Q9UC06 446 aaPredicted RBP16.93■□□□□ 0.3
TRIM41-207ENST00000515223 PFASO15067 1338 aa16.93■□□□□ 0.3
TRIM41-207ENST00000515223 PNPLA7Q6ZV29 1317 aa16.93■□□□□ 0.3
TRIM41-207ENST00000515223 MAPK13O15264 365 aa16.93■□□□□ 0.3
TRIM41-207ENST00000515223 H2AFXP16104 143 aaPredicted RBP16.93■□□□□ 0.3
TRIM41-207ENST00000515223 ANTXR2P58335 489 aa16.93■□□□□ 0.3
TRIM41-207ENST00000515223 ANKRD13AQ8IZ07 590 aa16.93■□□□□ 0.3
TRIM41-207ENST00000515223 DCP1BQ8IZD4 617 aaKnown RBP16.93■□□□□ 0.3
TRIM41-207ENST00000515223 AIPL1Q9NZN9 384 aa16.93■□□□□ 0.3
TRIM41-207ENST00000515223 SNX24Q9Y343 169 aa16.93■□□□□ 0.3
TRIM41-207ENST00000515223 KDM6AO15550 1401 aaPredicted RBP16.93■□□□□ 0.3
TRIM41-207ENST00000515223 CD4P01730 458 aa16.93■□□□□ 0.3
TRIM41-207ENST00000515223 GRIN1Q05586 938 aa16.93■□□□□ 0.3
TRIM41-207ENST00000515223 CCDC15Q0P6D6 951 aa16.93■□□□□ 0.3
TRIM41-207ENST00000515223 PID1Q7Z2X4 250 aa16.93■□□□□ 0.3
TRIM41-207ENST00000515223 RNF180Q86T96 592 aa16.93■□□□□ 0.3
TRIM41-207ENST00000515223 THOC1Q96FV9 657 aaKnown RBP16.93■□□□□ 0.3
TRIM41-207ENST00000515223 LRRC37BQ96QE4 947 aa16.93■□□□□ 0.3
TRIM41-207ENST00000515223 AAASQ9NRG9 546 aa16.93■□□□□ 0.3
TRIM41-207ENST00000515223 PARVAQ9NVD7 372 aa16.93■□□□□ 0.3
TRIM41-207ENST00000515223 PXDNLA1KZ92 1463 aa16.93■□□□□ 0.3
TRIM41-207ENST00000515223 SYNDIG1LA6NDD5 238 aa16.93■□□□□ 0.3
TRIM41-207ENST00000515223 CELF2O95319 508 aaKnown RBP16.93■□□□□ 0.3
TRIM41-207ENST00000515223 ITGA4P13612 1032 aa16.93■□□□□ 0.3
TRIM41-207ENST00000515223 CDH6P55285 790 aa16.93■□□□□ 0.3
TRIM41-207ENST00000515223 TPI1P60174 286 aa16.93■□□□□ 0.3
TRIM41-207ENST00000515223 MAGOHP61326 146 aaKnown RBP16.93■□□□□ 0.3
TRIM41-207ENST00000515223 FAM151AQ8WW52 585 aa16.93■□□□□ 0.3
TRIM41-207ENST00000515223 PNKPQ96T60 521 aa16.93■□□□□ 0.3
TRIM41-207ENST00000515223 FTLP02792 175 aaPredicted RBP16.93■□□□□ 0.3
TRIM41-207ENST00000515223 PRR5LQ6MZQ0 368 aa16.93■□□□□ 0.3
TRIM41-207ENST00000515223 MS4A14Q96JA4 679 aa16.93■□□□□ 0.3
TRIM41-207ENST00000515223 TRIM33Q9UPN9 1127 aa16.93■□□□□ 0.3
TRIM41-207ENST00000515223 SNX9Q9Y5X1 595 aa16.93■□□□□ 0.3
TRIM41-207ENST00000515223 GOLGA8MH3BSY2 632 aa16.92■□□□□ 0.3
TRIM41-207ENST00000515223 KRT17Q04695 432 aa16.92■□□□□ 0.3
TRIM41-207ENST00000515223 RRM2BQ7LG56 351 aa16.92■□□□□ 0.3
TRIM41-207ENST00000515223 SRPK1Q96SB4 655 aaKnown RBP16.92■□□□□ 0.3
TRIM41-207ENST00000515223 MRPL40Q9NQ50 206 aaKnown RBP16.92■□□□□ 0.3
TRIM41-207ENST00000515223 SH3BP1Q9Y3L3 701 aa16.92■□□□□ 0.3
TRIM41-207ENST00000515223 EMSYQ7Z589 1322 aa16.92■□□□□ 0.3
TRIM41-207ENST00000515223 AP3B1O00203 1094 aa16.92■□□□□ 0.3
TRIM41-207ENST00000515223 MMEP08473 750 aa16.92■□□□□ 0.3
TRIM41-207ENST00000515223 SCFD2Q8WU76 684 aa16.92■□□□□ 0.3
TRIM41-207ENST00000515223 RAPGEF5Q92565 580 aa16.92■□□□□ 0.3
TRIM41-207ENST00000515223 OTUB1Q96FW1 271 aaPredicted RBP16.92■□□□□ 0.3
TRIM41-207ENST00000515223 TRPA1O75762 1119 aa16.92■□□□□ 0.3
TRIM41-207ENST00000515223 FCGRTP55899 365 aa16.92■□□□□ 0.3
TRIM41-207ENST00000515223 PPM1NQ8N819 430 aa16.92■□□□□ 0.3
TRIM41-207ENST00000515223 MTBPQ96DY7 904 aa16.92■□□□□ 0.3
TRIM41-207ENST00000515223 NR1H4Q96RI1 486 aaPredicted RBP16.92■□□□□ 0.3
TRIM41-207ENST00000515223 NYAP2Q9P242 653 aa16.92■□□□□ 0.3
TRIM41-207ENST00000515223 NR3C2P08235 984 aa16.92■□□□□ 0.3
TRIM41-207ENST00000515223 MDM2Q00987 491 aaPredicted RBP16.92■□□□□ 0.3
TRIM41-207ENST00000515223 ST3GAL1Q11201 340 aa16.92■□□□□ 0.3
TRIM41-207ENST00000515223 TMEM132DQ14C87 1099 aa16.92■□□□□ 0.3
TRIM41-207ENST00000515223 GNASQ5JWF2 1037 aa16.92■□□□□ 0.3
TRIM41-207ENST00000515223 HHIPL2Q6UWX4 724 aa16.92■□□□□ 0.3
TRIM41-207ENST00000515223 MFN1Q8IWA4 741 aa16.92■□□□□ 0.3
TRIM41-207ENST00000515223 KDM4CQ9H3R0 1056 aa16.92■□□□□ 0.3
TRIM41-207ENST00000515223 CLCA2Q9UQC9 943 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms