RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 WBP4O75554 376 aaKnown RBP14.02□□□□□ -0.16
TCOF1-214ENST00000515035 PDE5AO76074 875 aa14.02□□□□□ -0.16
TCOF1-214ENST00000515035 ITIH2P19823 946 aa14.02□□□□□ -0.16
TCOF1-214ENST00000515035 MAGEA13PA6NCF6 341 aa14.02□□□□□ -0.17
TCOF1-214ENST00000515035 NEMP1O14524 444 aa14.02□□□□□ -0.17
TCOF1-214ENST00000515035 ZBTB7AO95365 584 aa14.02□□□□□ -0.17
TCOF1-214ENST00000515035 ASNSP08243 561 aa14.02□□□□□ -0.17
TCOF1-214ENST00000515035 TRIM49P0CI25 452 aa14.02□□□□□ -0.17
TCOF1-214ENST00000515035 TRIM49CP0CI26 452 aa14.02□□□□□ -0.17
TCOF1-214ENST00000515035 CCND2P30279 289 aa14.02□□□□□ -0.17
TCOF1-214ENST00000515035 LBRQ14739 615 aaKnown RBP14.02□□□□□ -0.17
TCOF1-214ENST00000515035 CDKL3Q8IVW4 592 aaPredicted RBP14.02□□□□□ -0.17
TCOF1-214ENST00000515035 APLFQ8IW19 511 aaPredicted RBP14.02□□□□□ -0.17
TCOF1-214ENST00000515035 ZNF555Q8NEP9 628 aa14.02□□□□□ -0.17
TCOF1-214ENST00000515035 PPP1R36Q96LQ0 422 aa14.02□□□□□ -0.17
TCOF1-214ENST00000515035 GID8Q9NWU2 228 aa14.02□□□□□ -0.17
TCOF1-214ENST00000515035 EIF2AK2P19525 551 aaKnown RBP14.02□□□□□ -0.17
TCOF1-214ENST00000515035 GNA15P30679 374 aa14.02□□□□□ -0.17
TCOF1-214ENST00000515035 CDK8P49336 464 aa14.02□□□□□ -0.17
TCOF1-214ENST00000515035 DEFA1P59665 94 aa14.02□□□□□ -0.17
TCOF1-214ENST00000515035 DEFA3P59666 94 aa14.02□□□□□ -0.17
TCOF1-214ENST00000515035 ACTR2P61160 394 aa14.02□□□□□ -0.17
TCOF1-214ENST00000515035 KCNB1Q14721 858 aa14.02□□□□□ -0.17
TCOF1-214ENST00000515035 CYGBQ8WWM9 190 aa14.02□□□□□ -0.17
TCOF1-214ENST00000515035 MAGEB5Q9BZ81 275 aa14.02□□□□□ -0.17
TCOF1-214ENST00000515035 PSMC3IPQ9P2W1 217 aaPredicted RBP14.02□□□□□ -0.17
TCOF1-214ENST00000515035 MTO1Q9Y2Z2 717 aaKnown RBP14.02□□□□□ -0.17
TCOF1-214ENST00000515035 KCNA2P16389 499 aa14.01□□□□□ -0.17
TCOF1-214ENST00000515035 MCAMP43121 646 aa14.01□□□□□ -0.17
TCOF1-214ENST00000515035 DMC1Q14565 340 aa14.01□□□□□ -0.17
TCOF1-214ENST00000515035 PADI6Q6TGC4 694 aa14.01□□□□□ -0.17
TCOF1-214ENST00000515035 ATXN7L3BQ96GX2 97 aa14.01□□□□□ -0.17
TCOF1-214ENST00000515035 LMTK2Q8IWU2 1503 aa14.01□□□□□ -0.17
TCOF1-214ENST00000515035 NR1I3Q14994 352 aa14.01□□□□□ -0.17
TCOF1-214ENST00000515035 ZNF699Q32M78 642 aa14.01□□□□□ -0.17
TCOF1-214ENST00000515035 LZICQ8WZA0 190 aa14.01□□□□□ -0.17
TCOF1-214ENST00000515035 FAM213AQ9BRX8 229 aa14.01□□□□□ -0.17
TCOF1-214ENST00000515035 LY9Q9HBG7 655 aa14.01□□□□□ -0.17
TCOF1-214ENST00000515035 SUGT1Q9Y2Z0 365 aa14.01□□□□□ -0.17
TCOF1-214ENST00000515035 BLVRAP53004 296 aa14.01□□□□□ -0.17
TCOF1-214ENST00000515035 RCAN1P53805 252 aa14.01□□□□□ -0.17
TCOF1-214ENST00000515035 KYNUQ16719 465 aa14.01□□□□□ -0.17
TCOF1-214ENST00000515035 TJAP1Q5JTD0 557 aa14.01□□□□□ -0.17
TCOF1-214ENST00000515035 CLEC4FQ8N1N0 589 aa14.01□□□□□ -0.17
TCOF1-214ENST00000515035 MRPL1Q9BYD6 325 aaKnown RBP14.01□□□□□ -0.17
TCOF1-214ENST00000515035 AGPAT5Q9NUQ2 364 aa14.01□□□□□ -0.17
TCOF1-214ENST00000515035 F8W8V4 182 aa14.01□□□□□ -0.17
TCOF1-214ENST00000515035 KLHL2O95198 593 aa14.01□□□□□ -0.17
TCOF1-214ENST00000515035 SRGNP10124 158 aa14.01□□□□□ -0.17
TCOF1-214ENST00000515035 ATXN3P54252 364 aaPredicted RBP14.01□□□□□ -0.17
TCOF1-214ENST00000515035 TMEM179Q6ZVK1 233 aa14.01□□□□□ -0.17
TCOF1-214ENST00000515035 C2orf69Q8N8R5 385 aa14.01□□□□□ -0.17
TCOF1-214ENST00000515035 NLRP4Q96MN2 994 aa14.01□□□□□ -0.17
TCOF1-214ENST00000515035 AGPAT1Q99943 283 aa14.01□□□□□ -0.17
TCOF1-214ENST00000515035 FUT8Q9BYC5 575 aa14.01□□□□□ -0.17
TCOF1-214ENST00000515035 UNC45AQ9H3U1 944 aa14.01□□□□□ -0.17
TCOF1-214ENST00000515035 MINPP1Q9UNW1 487 aa14.01□□□□□ -0.17
TCOF1-214ENST00000515035 CLDN3O15551 220 aa14□□□□□ -0.17
TCOF1-214ENST00000515035 ATP6V1E1P36543 226 aa14□□□□□ -0.17
TCOF1-214ENST00000515035 P3H1Q32P28 736 aa14□□□□□ -0.17
TCOF1-214ENST00000515035 DDX42Q86XP3 938 aaKnown RBP eCLIP14□□□□□ -0.17
TCOF1-214ENST00000515035 ROPN1BQ9BZX4 212 aaPredicted RBP14□□□□□ -0.17
TCOF1-214ENST00000515035 ALDH8A1Q9H2A2 487 aaPredicted RBP14□□□□□ -0.17
TCOF1-214ENST00000515035 ROPN1Q9HAT0 212 aaPredicted RBP14□□□□□ -0.17
TCOF1-214ENST00000515035 COPG1Q9Y678 874 aaKnown RBP14□□□□□ -0.17
TCOF1-214ENST00000515035 AIM2O14862 343 aa14□□□□□ -0.17
TCOF1-214ENST00000515035 TBXAS1P24557 533 aaPredicted RBP14□□□□□ -0.17
TCOF1-214ENST00000515035 ATP2C1P98194 919 aaPredicted RBP14□□□□□ -0.17
TCOF1-214ENST00000515035 KPNB1Q14974 876 aaKnown RBP14□□□□□ -0.17
TCOF1-214ENST00000515035 ZCWPW2Q504Y3 356 aa14□□□□□ -0.17
TCOF1-214ENST00000515035 PATL1Q86TB9 770 aaKnown RBP14□□□□□ -0.17
TCOF1-214ENST00000515035 CNPY4Q8N129 248 aa14□□□□□ -0.17
TCOF1-214ENST00000515035 MMGT1Q8N4V1 131 aa14□□□□□ -0.17
TCOF1-214ENST00000515035 MYCBPAPQ8TBZ2 947 aa14□□□□□ -0.17
TCOF1-214ENST00000515035 CMTM5Q96DZ9 223 aa14□□□□□ -0.17
TCOF1-214ENST00000515035 DONSONQ9NYP3 566 aa14□□□□□ -0.17
TCOF1-214ENST00000515035 ATP8B3O60423 1300 aa14□□□□□ -0.17
TCOF1-214ENST00000515035 TRIM16LQ309B1 348 aa14□□□□□ -0.17
TCOF1-214ENST00000515035 DEPDC1Q5TB30 811 aa14□□□□□ -0.17
TCOF1-214ENST00000515035 TRAF7Q6Q0C0 670 aa14□□□□□ -0.17
TCOF1-214ENST00000515035 C16orf89Q6UX73 402 aa14□□□□□ -0.17
TCOF1-214ENST00000515035 TRIM72Q6ZMU5 477 aa14□□□□□ -0.17
TCOF1-214ENST00000515035 JAMLQ86YT9 394 aa14□□□□□ -0.17
TCOF1-214ENST00000515035 CPVLQ9H3G5 476 aa14□□□□□ -0.17
TCOF1-214ENST00000515035 SEPT3Q9UH03 358 aa14□□□□□ -0.17
TCOF1-214ENST00000515035 SLC16A4O15374 487 aa14□□□□□ -0.17
TCOF1-214ENST00000515035 CRKP46108 304 aa14□□□□□ -0.17
TCOF1-214ENST00000515035 TBCCQ15814 346 aa14□□□□□ -0.17
TCOF1-214ENST00000515035 NAIF1Q69YI7 327 aaPredicted RBP14□□□□□ -0.17
TCOF1-214ENST00000515035 MCPH1Q8NEM0 835 aa14□□□□□ -0.17
TCOF1-214ENST00000515035 NSL1Q96IY1 281 aa14□□□□□ -0.17
TCOF1-214ENST00000515035 ISCUQ9H1K1 167 aa14□□□□□ -0.17
TCOF1-214ENST00000515035 L2HGDHQ9H9P8 463 aa14□□□□□ -0.17
TCOF1-214ENST00000515035 CDV3Q9UKY7 258 aaKnown RBP14□□□□□ -0.17
TCOF1-214ENST00000515035 POTEFA5A3E0 1075 aa13.99□□□□□ -0.17
TCOF1-214ENST00000515035 IGKV5-2P06315 115 aa13.99□□□□□ -0.17
TCOF1-214ENST00000515035 POTEIP0CG38 1075 aa13.99□□□□□ -0.17
TCOF1-214ENST00000515035 SCP2P22307 547 aa13.99□□□□□ -0.17
TCOF1-214ENST00000515035 GALCP54803 685 aa13.99□□□□□ -0.17
TCOF1-214ENST00000515035 CDH6P55285 790 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms