RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 UBE3AQ05086 875 aa9.08□□□□□ -0.96
CCL28-204ENST00000514421 CUL4BQ13620 913 aa9.08□□□□□ -0.96
CCL28-204ENST00000514421 ALCAMQ13740 583 aa9.08□□□□□ -0.96
CCL28-204ENST00000514421 ZC2HC1CQ53FD0 456 aaPredicted RBP9.08□□□□□ -0.96
CCL28-204ENST00000514421 SLFN12LQ6IEE8 588 aa9.08□□□□□ -0.96
CCL28-204ENST00000514421 MPZL3Q6UWV2 235 aa9.08□□□□□ -0.96
CCL28-204ENST00000514421 UNC13DQ70J99 1090 aa9.08□□□□□ -0.96
CCL28-204ENST00000514421 ZNF280BQ86YH2 543 aa9.08□□□□□ -0.96
CCL28-204ENST00000514421 MAP4K3Q8IVH8 894 aa9.08□□□□□ -0.96
CCL28-204ENST00000514421 THNSL1Q8IYQ7 743 aa9.08□□□□□ -0.96
CCL28-204ENST00000514421 GSTCDQ8NEC7 633 aa9.08□□□□□ -0.96
CCL28-204ENST00000514421 ENOX1Q8TC92 643 aaKnown RBP9.08□□□□□ -0.96
CCL28-204ENST00000514421 GDPD5Q8WTR4 605 aa9.08□□□□□ -0.96
CCL28-204ENST00000514421 MRPL38Q96DV4 380 aaKnown RBP9.08□□□□□ -0.96
CCL28-204ENST00000514421 BICD1Q96G01 975 aa9.08□□□□□ -0.96
CCL28-204ENST00000514421 ZFP42Q96MM3 310 aa9.08□□□□□ -0.96
CCL28-204ENST00000514421 ACAP3Q96P50 834 aa9.08□□□□□ -0.96
CCL28-204ENST00000514421 ACCSQ96QU6 501 aa9.08□□□□□ -0.96
CCL28-204ENST00000514421 TMEM175Q9BSA9 504 aa9.08□□□□□ -0.96
CCL28-204ENST00000514421 CCDC94Q9BW85 323 aaPredicted RBP9.08□□□□□ -0.96
CCL28-204ENST00000514421 GTPBP4Q9BZE4 634 aaKnown RBP9.08□□□□□ -0.96
CCL28-204ENST00000514421 CDT1Q9H211 546 aa9.08□□□□□ -0.96
CCL28-204ENST00000514421 TMEM206Q9H813 350 aa9.08□□□□□ -0.96
CCL28-204ENST00000514421 ALG13Q9NP73 1137 aaKnown RBP9.08□□□□□ -0.96
CCL28-204ENST00000514421 KLK14Q9P0G3 267 aa9.08□□□□□ -0.96
CCL28-204ENST00000514421 TBC1D7Q9P0N9 293 aa9.08□□□□□ -0.96
CCL28-204ENST00000514421 EXOC7Q9UPT5 735 aa9.08□□□□□ -0.96
CCL28-204ENST00000514421 FAN1Q9Y2M0 1017 aa9.08□□□□□ -0.96
CCL28-204ENST00000514421 CHD9Q3L8U1 2897 aa9.07□□□□□ -0.96
CCL28-204ENST00000514421 NT5C1B-RDH14C9J2C7 533 aa9.07□□□□□ -0.96
CCL28-204ENST00000514421 BIN1O00499 593 aa9.07□□□□□ -0.96
CCL28-204ENST00000514421 ABLIM1O14639 778 aa9.07□□□□□ -0.96
CCL28-204ENST00000514421 GRM6O15303 877 aa9.07□□□□□ -0.96
CCL28-204ENST00000514421 PPP1R37O75864 691 aa9.07□□□□□ -0.96
CCL28-204ENST00000514421 FGF18O76093 207 aa9.07□□□□□ -0.96
CCL28-204ENST00000514421 DDHD2O94830 711 aa9.07□□□□□ -0.96
CCL28-204ENST00000514421 GCNT3O95395 438 aa9.07□□□□□ -0.96
CCL28-204ENST00000514421 CLTAP09496 248 aa9.07□□□□□ -0.96
CCL28-204ENST00000514421 PPM1AP35813 382 aa9.07□□□□□ -0.96
CCL28-204ENST00000514421 MLH1P40692 756 aa9.07□□□□□ -0.96
CCL28-204ENST00000514421 MATR3P43243 847 aaKnown RBP eCLIP9.07□□□□□ -0.96
CCL28-204ENST00000514421 SCNN1GP51170 649 aa9.07□□□□□ -0.96
CCL28-204ENST00000514421 YARSP54577 528 aaKnown RBP9.07□□□□□ -0.96
CCL28-204ENST00000514421 BCAR1P56945 870 aa9.07□□□□□ -0.96
CCL28-204ENST00000514421 TPM4P67936 248 aa9.07□□□□□ -0.96
CCL28-204ENST00000514421 MCL1Q07820 350 aa9.07□□□□□ -0.96
CCL28-204ENST00000514421 COASYQ13057 564 aa9.07□□□□□ -0.96
CCL28-204ENST00000514421 KCNB1Q14721 858 aa9.07□□□□□ -0.96
CCL28-204ENST00000514421 CCDC85BQ15834 202 aaPredicted RBP9.07□□□□□ -0.96
CCL28-204ENST00000514421 KYAT1Q16773 422 aa9.07□□□□□ -0.96
CCL28-204ENST00000514421 ZNF568Q3ZCX4 644 aa9.07□□□□□ -0.96
CCL28-204ENST00000514421 COBLL1Q53SF7 1204 aa9.07□□□□□ -0.96
CCL28-204ENST00000514421 STXBP4Q6ZWJ1 553 aa9.07□□□□□ -0.96
CCL28-204ENST00000514421 SLC39A11Q8N1S5 342 aa9.07□□□□□ -0.96
CCL28-204ENST00000514421 MAFAQ8NHW3 353 aaPredicted RBP9.07□□□□□ -0.96
CCL28-204ENST00000514421 ZNF507Q8TCN5 953 aa9.07□□□□□ -0.96
CCL28-204ENST00000514421 MED15Q96RN5 788 aa9.07□□□□□ -0.96
CCL28-204ENST00000514421 RPS6KC1Q96S38 1066 aa9.07□□□□□ -0.96
CCL28-204ENST00000514421 TRIM5Q9C035 493 aa9.07□□□□□ -0.96
CCL28-204ENST00000514421 GBP3Q9H0R5 595 aa9.07□□□□□ -0.96
CCL28-204ENST00000514421 BLZF1Q9H2G9 400 aa9.07□□□□□ -0.96
CCL28-204ENST00000514421 IMPACTQ9P2X3 320 aa9.07□□□□□ -0.96
CCL28-204ENST00000514421 HCSTQ9UBK5 93 aa9.07□□□□□ -0.96
CCL28-204ENST00000514421 LZTS1Q9Y250 596 aa9.07□□□□□ -0.96
CCL28-204ENST00000514421 GDAQ9Y2T3 454 aa9.07□□□□□ -0.96
CCL28-204ENST00000514421 STYXL1Q9Y6J8 313 aa9.07□□□□□ -0.96
CCL28-204ENST00000514421 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.07□□□□□ -0.96
CCL28-204ENST00000514421 ZMYM2Q9UBW7 1377 aa9.07□□□□□ -0.96
CCL28-204ENST00000514421 SIP14410 1827 aa9.07□□□□□ -0.96
CCL28-204ENST00000514421 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.06□□□□□ -0.96
CCL28-204ENST00000514421 A0A0B4J269 797 aa9.06□□□□□ -0.96
CCL28-204ENST00000514421 ANKRD63C9JTQ0 380 aa9.06□□□□□ -0.96
CCL28-204ENST00000514421 NRP1O14786 923 aa9.06□□□□□ -0.96
CCL28-204ENST00000514421 HNRNPDLO14979 420 aaKnown RBP9.06□□□□□ -0.96
CCL28-204ENST00000514421 ZC3H11AO75152 810 aaKnown RBP eCLIP9.06□□□□□ -0.96
CCL28-204ENST00000514421 RECQL4O94761 1208 aa9.06□□□□□ -0.96
CCL28-204ENST00000514421 PRPF6O94906 941 aaKnown RBP9.06□□□□□ -0.96
CCL28-204ENST00000514421 THP07101 528 aa9.06□□□□□ -0.96
CCL28-204ENST00000514421 MYBP10242 640 aa9.06□□□□□ -0.96
CCL28-204ENST00000514421 HARSP12081 509 aaKnown RBP9.06□□□□□ -0.96
CCL28-204ENST00000514421 CASP1P29466 404 aa9.06□□□□□ -0.96
CCL28-204ENST00000514421 SLC11A1P49279 550 aa9.06□□□□□ -0.96
CCL28-204ENST00000514421 OSTNP61366 133 aa9.06□□□□□ -0.96
CCL28-204ENST00000514421 DSC1Q08554 894 aa9.06□□□□□ -0.96
CCL28-204ENST00000514421 GRIK3Q13003 919 aa9.06□□□□□ -0.96
CCL28-204ENST00000514421 PSMD2Q13200 908 aa9.06□□□□□ -0.96
CCL28-204ENST00000514421 CAMK1Q14012 370 aa9.06□□□□□ -0.96
CCL28-204ENST00000514421 BMS1Q14692 1282 aaKnown RBP9.06□□□□□ -0.96
CCL28-204ENST00000514421 NOLC1Q14978 699 aaKnown RBP eCLIP9.06□□□□□ -0.96
CCL28-204ENST00000514421 XKR4Q5GH76 650 aa9.06□□□□□ -0.96
CCL28-204ENST00000514421 FAM26FQ5R3K3 315 aa9.06□□□□□ -0.96
CCL28-204ENST00000514421 PDE12Q6L8Q7 609 aaKnown RBP9.06□□□□□ -0.96
CCL28-204ENST00000514421 ALKAL1Q6UXT8 129 aa9.06□□□□□ -0.96
CCL28-204ENST00000514421 COLGALT2Q8IYK4 626 aa9.06□□□□□ -0.96
CCL28-204ENST00000514421 GRAMD1CQ8IYS0 662 aa9.06□□□□□ -0.96
CCL28-204ENST00000514421 SYCP3Q8IZU3 236 aa9.06□□□□□ -0.96
CCL28-204ENST00000514421 CEP120Q8N960 986 aa9.06□□□□□ -0.96
CCL28-204ENST00000514421 MICAL1Q8TDZ2 1067 aa9.06□□□□□ -0.96
CCL28-204ENST00000514421 POF1BQ8WVV4 589 aa9.06□□□□□ -0.96
CCL28-204ENST00000514421 PPM1EQ8WY54 764 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms