RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 PFKFB1P16118 471 aa8.95□□□□□ -0.98
NEDD4-210ENST00000513957 LIG1P18858 919 aa8.95□□□□□ -0.98
NEDD4-210ENST00000513957 SYKP43405 635 aa8.95□□□□□ -0.98
NEDD4-210ENST00000513957 SNRPFP62306 86 aaKnown RBP8.95□□□□□ -0.98
NEDD4-210ENST00000513957 POSTNQ15063 836 aa8.95□□□□□ -0.98
NEDD4-210ENST00000513957 XKR4Q5GH76 650 aa8.95□□□□□ -0.98
NEDD4-210ENST00000513957 HERC4Q5GLZ8 1057 aaPredicted RBP8.95□□□□□ -0.98
NEDD4-210ENST00000513957 KANK3Q6NY19 840 aa8.95□□□□□ -0.98
NEDD4-210ENST00000513957 UNC13DQ70J99 1090 aa8.95□□□□□ -0.98
NEDD4-210ENST00000513957 DYMQ7RTS9 669 aa8.95□□□□□ -0.98
NEDD4-210ENST00000513957 SPRED2Q7Z698 418 aa8.95□□□□□ -0.98
NEDD4-210ENST00000513957 SFR1Q86XK3 245 aa8.95□□□□□ -0.98
NEDD4-210ENST00000513957 SPPL3Q8TCT6 385 aa8.95□□□□□ -0.98
NEDD4-210ENST00000513957 POF1BQ8WVV4 589 aa8.95□□□□□ -0.98
NEDD4-210ENST00000513957 BICD1Q96G01 975 aa8.95□□□□□ -0.98
NEDD4-210ENST00000513957 UROC1Q96N76 676 aa8.95□□□□□ -0.98
NEDD4-210ENST00000513957 ACAP3Q96P50 834 aa8.95□□□□□ -0.98
NEDD4-210ENST00000513957 GAD1Q99259 594 aa8.95□□□□□ -0.98
NEDD4-210ENST00000513957 TCHPQ9BT92 498 aa8.95□□□□□ -0.98
NEDD4-210ENST00000513957 STRA6Q9BX79 667 aa8.95□□□□□ -0.98
NEDD4-210ENST00000513957 NRDE2Q9H7Z3 1164 aa8.95□□□□□ -0.98
NEDD4-210ENST00000513957 PLEKHA5Q9HAU0 1116 aa8.95□□□□□ -0.98
NEDD4-210ENST00000513957 PANK4Q9NVE7 773 aa8.95□□□□□ -0.98
NEDD4-210ENST00000513957 CHMP5Q9NZZ3 219 aa8.95□□□□□ -0.98
NEDD4-210ENST00000513957 PARP2Q9UGN5 583 aa8.95□□□□□ -0.98
NEDD4-210ENST00000513957 SSX2IPQ9Y2D8 614 aa8.95□□□□□ -0.98
NEDD4-210ENST00000513957 INPP5FQ9Y2H2 1132 aa8.95□□□□□ -0.98
NEDD4-210ENST00000513957 HES2Q9Y543 173 aa8.95□□□□□ -0.98
NEDD4-210ENST00000513957 STYXL1Q9Y6J8 313 aa8.95□□□□□ -0.98
NEDD4-210ENST00000513957 MTCL1Q9Y4B5 1905 aaKnown RBP8.94□□□□□ -0.98
NEDD4-210ENST00000513957 TTLL13PA6NNM8 815 aa8.94□□□□□ -0.98
NEDD4-210ENST00000513957 TMEM189-UBE2V1I3L0A0 370 aa8.94□□□□□ -0.98
NEDD4-210ENST00000513957 RFXAPO00287 272 aa8.94□□□□□ -0.98
NEDD4-210ENST00000513957 SPTLC1O15269 473 aa8.94□□□□□ -0.98
NEDD4-210ENST00000513957 OGTO15294 1046 aa8.94□□□□□ -0.98
NEDD4-210ENST00000513957 GRM6O15303 877 aa8.94□□□□□ -0.98
NEDD4-210ENST00000513957 MAP3K7O43318 606 aa8.94□□□□□ -0.98
NEDD4-210ENST00000513957 ACTN4O43707 911 aaKnown RBP8.94□□□□□ -0.98
NEDD4-210ENST00000513957 GCNT3O95395 438 aa8.94□□□□□ -0.98
NEDD4-210ENST00000513957 GALTP07902 379 aa8.94□□□□□ -0.98
NEDD4-210ENST00000513957 CLTAP09496 248 aa8.94□□□□□ -0.98
NEDD4-210ENST00000513957 SCNN1GP51170 649 aa8.94□□□□□ -0.98
NEDD4-210ENST00000513957 ASIC1P78348 528 aa8.94□□□□□ -0.98
NEDD4-210ENST00000513957 EHHADHQ08426 723 aa8.94□□□□□ -0.98
NEDD4-210ENST00000513957 COASYQ13057 564 aa8.94□□□□□ -0.98
NEDD4-210ENST00000513957 TUSC3Q13454 348 aa8.94□□□□□ -0.98
NEDD4-210ENST00000513957 COL19A1Q14993 1142 aa8.94□□□□□ -0.98
NEDD4-210ENST00000513957 AAK1Q2M2I8 961 aa8.94□□□□□ -0.98
NEDD4-210ENST00000513957 L1TD1Q5T7N2 865 aaKnown RBP8.94□□□□□ -0.98
NEDD4-210ENST00000513957 EEF1DP3Q658K8 133 aa8.94□□□□□ -0.98
NEDD4-210ENST00000513957 DDX53Q86TM3 631 aaKnown RBP8.94□□□□□ -0.98
NEDD4-210ENST00000513957 CD302Q8IX05 232 aa8.94□□□□□ -0.98
NEDD4-210ENST00000513957 COLGALT2Q8IYK4 626 aa8.94□□□□□ -0.98
NEDD4-210ENST00000513957 GSTCDQ8NEC7 633 aa8.94□□□□□ -0.98
NEDD4-210ENST00000513957 IGSF21Q96ID5 467 aa8.94□□□□□ -0.98
NEDD4-210ENST00000513957 ZFP42Q96MM3 310 aa8.94□□□□□ -0.98
NEDD4-210ENST00000513957 ACCSQ96QU6 501 aa8.94□□□□□ -0.98
NEDD4-210ENST00000513957 PANK2Q9BZ23 570 aa8.94□□□□□ -0.98
NEDD4-210ENST00000513957 POLD4Q9HCU8 107 aa8.94□□□□□ -0.98
NEDD4-210ENST00000513957 SNTG2Q9NY99 539 aa8.94□□□□□ -0.98
NEDD4-210ENST00000513957 CNTN3Q9P232 1028 aa8.94□□□□□ -0.98
NEDD4-210ENST00000513957 CGNQ9P2M7 1197 aaKnown RBP8.94□□□□□ -0.98
NEDD4-210ENST00000513957 ANKFY1Q9P2R3 1169 aa8.94□□□□□ -0.98
NEDD4-210ENST00000513957 FAN1Q9Y2M0 1017 aa8.94□□□□□ -0.98
NEDD4-210ENST00000513957 IRAK3Q9Y616 596 aa8.94□□□□□ -0.98
NEDD4-210ENST00000513957 A0A0B4J269 797 aa8.93□□□□□ -0.98
NEDD4-210ENST00000513957 A0A1B0GVL5 298 aa8.93□□□□□ -0.98
NEDD4-210ENST00000513957 FSCN2O14926 492 aa8.93□□□□□ -0.98
NEDD4-210ENST00000513957 XPOTO43592 962 aaKnown RBP8.93□□□□□ -0.98
NEDD4-210ENST00000513957 AP1G2O75843 785 aa8.93□□□□□ -0.98
NEDD4-210ENST00000513957 DDHD2O94830 711 aa8.93□□□□□ -0.98
NEDD4-210ENST00000513957 KIF20AO95235 890 aa8.93□□□□□ -0.98
NEDD4-210ENST00000513957 LDHAP00338 332 aaKnown RBP8.93□□□□□ -0.98
NEDD4-210ENST00000513957 C1RP00736 705 aa8.93□□□□□ -0.98
NEDD4-210ENST00000513957 POMCP01189 267 aa8.93□□□□□ -0.98
NEDD4-210ENST00000513957 SRGAP2BP0DMP2 458 aa8.93□□□□□ -0.98
NEDD4-210ENST00000513957 KCNE1P15382 129 aa8.93□□□□□ -0.98
NEDD4-210ENST00000513957 GARTP22102 1010 aa8.93□□□□□ -0.98
NEDD4-210ENST00000513957 PAX3P23760 479 aa8.93□□□□□ -0.98
NEDD4-210ENST00000513957 AKAP5P24588 427 aa8.93□□□□□ -0.98
NEDD4-210ENST00000513957 NMT1P30419 496 aaKnown RBP8.93□□□□□ -0.98
NEDD4-210ENST00000513957 MATR3P43243 847 aaKnown RBP eCLIP8.93□□□□□ -0.98
NEDD4-210ENST00000513957 CREMQ03060 361 aa8.93□□□□□ -0.98
NEDD4-210ENST00000513957 PPP2R3AQ06190 1150 aa8.93□□□□□ -0.98
NEDD4-210ENST00000513957 ELAVL2Q12926 359 aaKnown RBP8.93□□□□□ -0.98
NEDD4-210ENST00000513957 PSMD2Q13200 908 aa8.93□□□□□ -0.98
NEDD4-210ENST00000513957 SMC1AQ14683 1233 aaKnown RBP8.93□□□□□ -0.98
NEDD4-210ENST00000513957 LONRF3Q496Y0 759 aa8.93□□□□□ -0.98
NEDD4-210ENST00000513957 FAM26FQ5R3K3 315 aa8.93□□□□□ -0.98
NEDD4-210ENST00000513957 ALKAL1Q6UXT8 129 aa8.93□□□□□ -0.98
NEDD4-210ENST00000513957 CDR2LQ86X02 465 aaPredicted RBP8.93□□□□□ -0.98
NEDD4-210ENST00000513957 NT5DC4Q86YG4 428 aa8.93□□□□□ -0.98
NEDD4-210ENST00000513957 ELOA2Q8IYF1 753 aaPredicted RBP8.93□□□□□ -0.98
NEDD4-210ENST00000513957 FSIP1Q8NA03 581 aa8.93□□□□□ -0.98
NEDD4-210ENST00000513957 TMEM87AQ8NBN3 555 aa8.93□□□□□ -0.98
NEDD4-210ENST00000513957 ATXN2LQ8WWM7 1075 aaKnown RBP8.93□□□□□ -0.98
NEDD4-210ENST00000513957 CCDC47Q96A33 483 aaKnown RBP8.93□□□□□ -0.98
NEDD4-210ENST00000513957 PABPC5Q96DU9 382 aaKnown RBP8.93□□□□□ -0.98
NEDD4-210ENST00000513957 SNX27Q96L92 541 aa8.93□□□□□ -0.98
NEDD4-210ENST00000513957 PPP1R10Q96QC0 940 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms