RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 CHMP4BP1P59074 171 aa13.88□□□□□ -0.19
PVT1-203ENST00000513868 NKX3-2P78367 333 aa13.88□□□□□ -0.19
PVT1-203ENST00000513868 KIF22Q14807 665 aa13.88□□□□□ -0.19
PVT1-203ENST00000513868 SCARA3Q6AZY7 606 aa13.88□□□□□ -0.19
PVT1-203ENST00000513868 ZNF410Q86VK4 478 aa13.88□□□□□ -0.19
PVT1-203ENST00000513868 SLC35F6Q8N357 371 aa13.88□□□□□ -0.19
PVT1-203ENST00000513868 CEP120Q8N960 986 aa13.88□□□□□ -0.19
PVT1-203ENST00000513868 OR5B17Q8NGF7 314 aa13.88□□□□□ -0.19
PVT1-203ENST00000513868 SLC30A5Q8TAD4 765 aa13.88□□□□□ -0.19
PVT1-203ENST00000513868 TATDN2Q93075 761 aa13.88□□□□□ -0.19
PVT1-203ENST00000513868 VTI1AQ96AJ9 217 aa13.88□□□□□ -0.19
PVT1-203ENST00000513868 CDT1Q9H211 546 aa13.88□□□□□ -0.19
PVT1-203ENST00000513868 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.88□□□□□ -0.198e-7■■■■■ 154.5
PVT1-203ENST00000513868 SMIM35A0A1B0GVV1 85 aa13.88□□□□□ -0.19
PVT1-203ENST00000513868 GPR25O00155 361 aa13.88□□□□□ -0.19
PVT1-203ENST00000513868 TULP1O00294 542 aaPredicted RBP13.88□□□□□ -0.19
PVT1-203ENST00000513868 DDX3XO00571 662 aaKnown RBP eCLIP13.88□□□□□ -0.193e-8■□□□□ 10.9
PVT1-203ENST00000513868 ZEB2O60315 1214 aa13.88□□□□□ -0.19
PVT1-203ENST00000513868 ARF4P18085 180 aaPredicted RBP13.88□□□□□ -0.19
PVT1-203ENST00000513868 ANXA13P27216 316 aa13.88□□□□□ -0.19
PVT1-203ENST00000513868 GTF2F1P35269 517 aaKnown RBP eCLIP13.88□□□□□ -0.193e-6■■□□□ 13.2
PVT1-203ENST00000513868 CACNB2Q08289 660 aaPredicted RBP13.88□□□□□ -0.19
PVT1-203ENST00000513868 KIF5AQ12840 1032 aa13.88□□□□□ -0.19
PVT1-203ENST00000513868 ZNF568Q3ZCX4 644 aa13.88□□□□□ -0.19
PVT1-203ENST00000513868 RUFY4Q6ZNE9 571 aa13.88□□□□□ -0.19
PVT1-203ENST00000513868 LNX1Q8TBB1 728 aaPredicted RBP13.88□□□□□ -0.19
PVT1-203ENST00000513868 NLRP7Q8WX94 980 aa13.88□□□□□ -0.19
PVT1-203ENST00000513868 SHC3Q92529 594 aa13.88□□□□□ -0.19
PVT1-203ENST00000513868 NT5C1BQ96P26 610 aa13.88□□□□□ -0.19
PVT1-203ENST00000513868 PI4K2AQ9BTU6 479 aa13.88□□□□□ -0.19
PVT1-203ENST00000513868 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.88□□□□□ -0.192e-7■■■■■ 28.4
PVT1-203ENST00000513868 UPF3AQ9H1J1 476 aaKnown RBP13.88□□□□□ -0.19
PVT1-203ENST00000513868 PDZD7Q9H5P4 517 aa13.88□□□□□ -0.19
PVT1-203ENST00000513868 CDHR5Q9HBB8 845 aa13.88□□□□□ -0.19
PVT1-203ENST00000513868 SALL4Q9UJQ4 1053 aa13.88□□□□□ -0.19
PVT1-203ENST00000513868 THSD7BQ9C0I4 1608 aa13.87□□□□□ -0.19
PVT1-203ENST00000513868 FRMPD3Q5JV73 1810 aa13.87□□□□□ -0.19
PVT1-203ENST00000513868 MEFVO15553 781 aaPredicted RBP13.87□□□□□ -0.19
PVT1-203ENST00000513868 TREHO43280 583 aa13.87□□□□□ -0.19
PVT1-203ENST00000513868 TSPAN1O60635 241 aa13.87□□□□□ -0.19
PVT1-203ENST00000513868 ZC3H11AO75152 810 aaKnown RBP eCLIP13.87□□□□□ -0.19
PVT1-203ENST00000513868 HLA-DRAP01903 254 aa13.87□□□□□ -0.19
PVT1-203ENST00000513868 C6orf222P0C671 652 aaPredicted RBP13.87□□□□□ -0.19
PVT1-203ENST00000513868 ZNF200P98182 395 aaPredicted RBP13.87□□□□□ -0.19
PVT1-203ENST00000513868 KIZQ2M2Z5 673 aa13.87□□□□□ -0.19
PVT1-203ENST00000513868 SRGAP1Q7Z6B7 1085 aa13.87□□□□□ -0.19
PVT1-203ENST00000513868 TMEM192Q8IY95 271 aa13.87□□□□□ -0.19
PVT1-203ENST00000513868 FAM71AQ8IYT1 594 aa13.87□□□□□ -0.19
PVT1-203ENST00000513868 PPM1KQ8N3J5 372 aa13.87□□□□□ -0.19
PVT1-203ENST00000513868 CPB2Q96IY4 423 aa13.87□□□□□ -0.19
PVT1-203ENST00000513868 TSGA10Q9BZW7 698 aa13.87□□□□□ -0.19
PVT1-203ENST00000513868 FAM49AQ9H0Q0 323 aaPredicted RBP13.87□□□□□ -0.19
PVT1-203ENST00000513868 HDAC6Q9UBN7 1215 aa13.87□□□□□ -0.19
PVT1-203ENST00000513868 NAGPAQ9UK23 515 aa13.87□□□□□ -0.19
PVT1-203ENST00000513868 UQCRHLA0A096LP55 91 aa13.86□□□□□ -0.19
PVT1-203ENST00000513868 SEPT4O43236 478 aa13.86□□□□□ -0.19
PVT1-203ENST00000513868 TRPA1O75762 1119 aa13.86□□□□□ -0.19
PVT1-203ENST00000513868 UQCRHP07919 91 aa13.86□□□□□ -0.19
PVT1-203ENST00000513868 CYP2C9P11712 490 aa13.86□□□□□ -0.19
PVT1-203ENST00000513868 MFAP3P55082 362 aa13.86□□□□□ -0.19
PVT1-203ENST00000513868 TMEM62Q0P6H9 643 aa13.86□□□□□ -0.19
PVT1-203ENST00000513868 BMS1Q14692 1282 aaKnown RBP13.86□□□□□ -0.19
PVT1-203ENST00000513868 NAB2Q15742 525 aa13.86□□□□□ -0.19
PVT1-203ENST00000513868 WDR49Q8IV35 697 aa13.86□□□□□ -0.19
PVT1-203ENST00000513868 FMNL3Q8IVF7 1028 aa13.86□□□□□ -0.19
PVT1-203ENST00000513868 THNSL1Q8IYQ7 743 aa13.86□□□□□ -0.19
PVT1-203ENST00000513868 KATNAL1Q9BW62 490 aa13.86□□□□□ -0.19
PVT1-203ENST00000513868 PACSIN1Q9BY11 444 aa13.86□□□□□ -0.19
PVT1-203ENST00000513868 A0A1B0GUA9 196 aa13.85□□□□□ -0.19
PVT1-203ENST00000513868 MACROD2A1Z1Q3 448 aa13.85□□□□□ -0.19
PVT1-203ENST00000513868 KPNA6O60684 536 aa13.85□□□□□ -0.19
PVT1-203ENST00000513868 URI1O94763 535 aaPredicted RBP13.85□□□□□ -0.19
PVT1-203ENST00000513868 PGK1P00558 417 aa13.85□□□□□ -0.19
PVT1-203ENST00000513868 MCF2P10911 925 aa13.85□□□□□ -0.19
PVT1-203ENST00000513868 ELNP15502 786 aa13.85□□□□□ -0.19
PVT1-203ENST00000513868 CCND3P30281 292 aaPredicted RBP13.85□□□□□ -0.19
PVT1-203ENST00000513868 GCNT1Q02742 428 aa13.85□□□□□ -0.19
PVT1-203ENST00000513868 GNASQ5JWF2 1037 aa13.85□□□□□ -0.19
PVT1-203ENST00000513868 ALKBH5Q6P6C2 394 aaKnown RBP13.85□□□□□ -0.19
PVT1-203ENST00000513868 EFCAB13Q8IY85 973 aa13.85□□□□□ -0.19
PVT1-203ENST00000513868 DNAJB3Q8WWF6 145 aa13.85□□□□□ -0.19
PVT1-203ENST00000513868 CTIFO43310 598 aaKnown RBP13.85□□□□□ -0.19
PVT1-203ENST00000513868 B4GALT4O60513 344 aa13.85□□□□□ -0.19
PVT1-203ENST00000513868 ADAMTS4O75173 837 aa13.85□□□□□ -0.19
PVT1-203ENST00000513868 CST3P01034 146 aaPredicted RBP13.85□□□□□ -0.19
PVT1-203ENST00000513868 CCDC172P0C7W6 258 aa13.85□□□□□ -0.19
PVT1-203ENST00000513868 FGFR4P22455 802 aa13.85□□□□□ -0.19
PVT1-203ENST00000513868 PIK3CAP42336 1068 aa13.85□□□□□ -0.19
PVT1-203ENST00000513868 AP3M2P53677 418 aa13.85□□□□□ -0.19
PVT1-203ENST00000513868 OSTNP61366 133 aa13.85□□□□□ -0.19
PVT1-203ENST00000513868 CDC42EP1Q00587 391 aa13.85□□□□□ -0.19
PVT1-203ENST00000513868 BIRC3Q13489 604 aa13.85□□□□□ -0.19
PVT1-203ENST00000513868 SURF1Q15526 300 aa13.85□□□□□ -0.19
PVT1-203ENST00000513868 TMEM132AQ24JP5 1023 aa13.85□□□□□ -0.19
PVT1-203ENST00000513868 C10orf76Q5T2E6 689 aa13.85□□□□□ -0.19
PVT1-203ENST00000513868 SPOPLQ6IQ16 392 aa13.85□□□□□ -0.19
PVT1-203ENST00000513868 DNAAF5Q86Y56 855 aa13.85□□□□□ -0.19
PVT1-203ENST00000513868 GLYCTKQ8IVS8 523 aa13.85□□□□□ -0.19
PVT1-203ENST00000513868 ZNF784Q8NCA9 323 aaPredicted RBP13.85□□□□□ -0.19
PVT1-203ENST00000513868 CD99L2Q8TCZ2 262 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms