RNA–Protein interactions for RNA: ENST00000513803.5

NFKB1-211, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-211ENST00000513803 NOVA1P51513 510 aaKnown RBP12.09□□□□□ -0.47
NFKB1-211ENST00000513803 USP11P51784 963 aa12.09□□□□□ -0.47
NFKB1-211ENST00000513803 PSMC5P62195 406 aa12.09□□□□□ -0.47
NFKB1-211ENST00000513803 FOXC1Q12948 553 aa12.09□□□□□ -0.47
NFKB1-211ENST00000513803 GRIK3Q13003 919 aa12.09□□□□□ -0.47
NFKB1-211ENST00000513803 PTGDRQ13258 359 aa12.09□□□□□ -0.47
NFKB1-211ENST00000513803 GAS6Q14393 721 aa12.09□□□□□ -0.47
NFKB1-211ENST00000513803 CCDC6Q16204 474 aa12.09□□□□□ -0.47
NFKB1-211ENST00000513803 FAM78AQ5JUQ0 283 aa12.09□□□□□ -0.47
NFKB1-211ENST00000513803 RNF43Q68DV7 783 aa12.09□□□□□ -0.47
NFKB1-211ENST00000513803 ANO5Q75V66 913 aa12.09□□□□□ -0.47
NFKB1-211ENST00000513803 CACNA2D4Q7Z3S7 1137 aa12.09□□□□□ -0.47
NFKB1-211ENST00000513803 WDR5BQ86VZ2 330 aa12.09□□□□□ -0.47
NFKB1-211ENST00000513803 GSTCDQ8NEC7 633 aa12.09□□□□□ -0.47
NFKB1-211ENST00000513803 RABGGTAQ92696 567 aa12.09□□□□□ -0.47
NFKB1-211ENST00000513803 ADAM33Q9BZ11 813 aa12.09□□□□□ -0.47
NFKB1-211ENST00000513803 PPME1Q9Y570 386 aa12.09□□□□□ -0.47
NFKB1-211ENST00000513803 PCDHGA5Q9Y5G8 931 aa12.09□□□□□ -0.47
NFKB1-211ENST00000513803 WDR81Q562E7 1941 aa12.08□□□□□ -0.48
NFKB1-211ENST00000513803 ZNF197O14709 1029 aa12.08□□□□□ -0.48
NFKB1-211ENST00000513803 ZNF263O14978 683 aa12.08□□□□□ -0.48
NFKB1-211ENST00000513803 ADAM12O43184 909 aa12.08□□□□□ -0.48
NFKB1-211ENST00000513803 PSMD10O75832 226 aa12.08□□□□□ -0.48
NFKB1-211ENST00000513803 MICAL2O94851 1124 aa12.08□□□□□ -0.48
NFKB1-211ENST00000513803 EPN2O95208 641 aa12.08□□□□□ -0.48
NFKB1-211ENST00000513803 RAP1GAPP47736 663 aa12.08□□□□□ -0.48
NFKB1-211ENST00000513803 SPIRE1Q08AE8 756 aa12.08□□□□□ -0.48
NFKB1-211ENST00000513803 TUSC3Q13454 348 aa12.08□□□□□ -0.48
NFKB1-211ENST00000513803 PFKFB3Q16875 520 aaPredicted RBP12.08□□□□□ -0.48
NFKB1-211ENST00000513803 DGKKQ5KSL6 1271 aa12.08□□□□□ -0.48
NFKB1-211ENST00000513803 APOA5Q6Q788 366 aa12.08□□□□□ -0.48
NFKB1-211ENST00000513803 RNF149Q8NC42 400 aa12.08□□□□□ -0.48
NFKB1-211ENST00000513803 BICD2Q8TD16 824 aa12.08□□□□□ -0.48
NFKB1-211ENST00000513803 DEPDC1BQ8WUY9 529 aa12.08□□□□□ -0.48
NFKB1-211ENST00000513803 TCP11Q8WWU5 503 aa12.08□□□□□ -0.48
NFKB1-211ENST00000513803 TMEM143Q96AN5 459 aa12.08□□□□□ -0.48
NFKB1-211ENST00000513803 KIF12Q96FN5 646 aa12.08□□□□□ -0.48
NFKB1-211ENST00000513803 MSANTD3Q96H12 275 aa12.08□□□□□ -0.48
NFKB1-211ENST00000513803 LRRC2Q9BYS8 371 aa12.08□□□□□ -0.48
NFKB1-211ENST00000513803 SGSM2O43147 1006 aa12.07□□□□□ -0.48
NFKB1-211ENST00000513803 ZBTB43O43298 467 aa12.07□□□□□ -0.48
NFKB1-211ENST00000513803 TSPAN1O60635 241 aa12.07□□□□□ -0.48
NFKB1-211ENST00000513803 DKC1O60832 514 aaKnown RBP eCLIP12.07□□□□□ -0.48
NFKB1-211ENST00000513803 LRG1P02750 347 aa12.07□□□□□ -0.48
NFKB1-211ENST00000513803 CEBPBP17676 345 aa12.07□□□□□ -0.48
NFKB1-211ENST00000513803 FCARP24071 287 aa12.07□□□□□ -0.48
NFKB1-211ENST00000513803 AKAP5P24588 427 aa12.07□□□□□ -0.48
NFKB1-211ENST00000513803 RFC5P40937 340 aa12.07□□□□□ -0.48
NFKB1-211ENST00000513803 ZNF252P-AS1Q0IIN9 211 aa12.07□□□□□ -0.48
NFKB1-211ENST00000513803 AAMPQ13685 434 aa12.07□□□□□ -0.48
NFKB1-211ENST00000513803 SLC5A9Q2M3M2 681 aa12.07□□□□□ -0.48
NFKB1-211ENST00000513803 PLA2G2CQ5R387 149 aa12.07□□□□□ -0.48
NFKB1-211ENST00000513803 DAB2IPQ5VWQ8 1189 aa12.07□□□□□ -0.48
NFKB1-211ENST00000513803 CSGALNACT1Q8TDX6 532 aa12.07□□□□□ -0.48
NFKB1-211ENST00000513803 GAB3Q8WWW8 586 aa12.07□□□□□ -0.48
NFKB1-211ENST00000513803 CPB2Q96IY4 423 aa12.07□□□□□ -0.48
NFKB1-211ENST00000513803 CEP170P1Q96L14 293 aa12.07□□□□□ -0.48
NFKB1-211ENST00000513803 ASB16Q96NS5 453 aa12.07□□□□□ -0.48
NFKB1-211ENST00000513803 TMEM121BQ9BXQ6 578 aaPredicted RBP12.07□□□□□ -0.48
NFKB1-211ENST00000513803 VPS45Q9NRW7 570 aa12.07□□□□□ -0.48
NFKB1-211ENST00000513803 PARP2Q9UGN5 583 aa12.07□□□□□ -0.48
NFKB1-211ENST00000513803 WASF3Q9UPY6 502 aa12.07□□□□□ -0.48
NFKB1-211ENST00000513803 SPAG17Q6Q759 2223 aa12.07□□□□□ -0.48
NFKB1-211ENST00000513803 LAMA1P25391 3075 aa12.07□□□□□ -0.48
NFKB1-211ENST00000513803 HELZ2Q9BYK8 2649 aaKnown RBP12.07□□□□□ -0.48
NFKB1-211ENST00000513803 ZMYM2Q9UBW7 1377 aa12.06□□□□□ -0.48
NFKB1-211ENST00000513803 NOTCH4Q99466 2003 aa12.06□□□□□ -0.48
NFKB1-211ENST00000513803 GREB1Q4ZG55 1949 aa12.06□□□□□ -0.48
NFKB1-211ENST00000513803 CCDC163A0A0D9SF12 145 aa12.06□□□□□ -0.48
NFKB1-211ENST00000513803 INO80B-WBP1J3KQ70 363 aa12.06□□□□□ -0.48
NFKB1-211ENST00000513803 RPP40O75818 363 aaKnown RBP12.06□□□□□ -0.48
NFKB1-211ENST00000513803 SPINK2P20155 84 aa12.06□□□□□ -0.48
NFKB1-211ENST00000513803 ELF1P32519 619 aa12.06□□□□□ -0.48
NFKB1-211ENST00000513803 NPEPPSP55786 919 aa12.06□□□□□ -0.48
NFKB1-211ENST00000513803 PTENP60484 403 aa12.06□□□□□ -0.48
NFKB1-211ENST00000513803 MXD4Q14582 209 aaPredicted RBP12.06□□□□□ -0.48
NFKB1-211ENST00000513803 CYP4A22Q5TCH4 519 aa12.06□□□□□ -0.48
NFKB1-211ENST00000513803 PLA2G4FQ68DD2 849 aa12.06□□□□□ -0.48
NFKB1-211ENST00000513803 POTEHQ6S545 545 aa12.06□□□□□ -0.48
NFKB1-211ENST00000513803 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.06□□□□□ -0.48
NFKB1-211ENST00000513803 FERMT3Q86UX7 667 aa12.06□□□□□ -0.48
NFKB1-211ENST00000513803 MFSD6LQ8IWD5 586 aa12.06□□□□□ -0.48
NFKB1-211ENST00000513803 SYNPOQ8N3V7 929 aa12.06□□□□□ -0.48
NFKB1-211ENST00000513803 HASPINQ8TF76 798 aa12.06□□□□□ -0.48
NFKB1-211ENST00000513803 ZCCHC14Q8WYQ9 949 aaKnown RBP12.06□□□□□ -0.48
NFKB1-211ENST00000513803 GATA6Q92908 595 aa12.06□□□□□ -0.48
NFKB1-211ENST00000513803 SMARCD2Q92925 531 aa12.06□□□□□ -0.48
NFKB1-211ENST00000513803 GJA10Q969M2 543 aa12.06□□□□□ -0.48
NFKB1-211ENST00000513803 PAAF1Q9BRP4 392 aa12.06□□□□□ -0.48
NFKB1-211ENST00000513803 NXF3Q9H4D5 531 aaKnown RBP12.06□□□□□ -0.48
NFKB1-211ENST00000513803 DHX33Q9H6R0 707 aaKnown RBP12.06□□□□□ -0.48
NFKB1-211ENST00000513803 C8orf33Q9H7E9 229 aaPredicted RBP12.06□□□□□ -0.48
NFKB1-211ENST00000513803 KLK14Q9P0G3 267 aa12.06□□□□□ -0.48
NFKB1-211ENST00000513803 AKAP13Q12802 2813 aa12.06□□□□□ -0.48
NFKB1-211ENST00000513803 ARHGEF37A1IGU5 675 aa12.05□□□□□ -0.48
NFKB1-211ENST00000513803 TAF4O00268 1085 aa12.05□□□□□ -0.48
NFKB1-211ENST00000513803 GIPC1O14908 333 aa12.05□□□□□ -0.48
NFKB1-211ENST00000513803 ADAMTS3O15072 1205 aa12.05□□□□□ -0.48
NFKB1-211ENST00000513803 KIF4AO95239 1232 aa12.05□□□□□ -0.48
NFKB1-211ENST00000513803 CCDC192P0DO97 292 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms