RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 TSPAN18Q96SJ8 248 aa10.72□□□□□ -0.69
TPM3-221ENST00000513769 PCIF1Q9H4Z3 704 aa10.72□□□□□ -0.69
TPM3-221ENST00000513769 IFT122Q9HBG6 1241 aa10.72□□□□□ -0.69
TPM3-221ENST00000513769 TMEM8AQ9HCN3 771 aa10.72□□□□□ -0.69
TPM3-221ENST00000513769 PTPRHQ9HD43 1115 aa10.72□□□□□ -0.69
TPM3-221ENST00000513769 PYCARDQ9ULZ3 195 aa10.72□□□□□ -0.69
TPM3-221ENST00000513769 PAXBP1Q9Y5B6 917 aa10.72□□□□□ -0.69
TPM3-221ENST00000513769 ADGRA3Q8IWK6 1321 aa10.72□□□□□ -0.69
TPM3-221ENST00000513769 DOCK3Q8IZD9 2030 aa10.72□□□□□ -0.69
TPM3-221ENST00000513769 EIF3CLB5ME19 914 aaKnown RBP10.71□□□□□ -0.69
TPM3-221ENST00000513769 OGTO15294 1046 aa10.71□□□□□ -0.69
TPM3-221ENST00000513769 FKTNO75072 461 aa10.71□□□□□ -0.69
TPM3-221ENST00000513769 OFD1O75665 1012 aa10.71□□□□□ -0.69
TPM3-221ENST00000513769 GFPT2O94808 682 aa10.71□□□□□ -0.69
TPM3-221ENST00000513769 IPO7O95373 1038 aaKnown RBP10.71□□□□□ -0.69
TPM3-221ENST00000513769 LCA5LO95447 670 aa10.71□□□□□ -0.69
TPM3-221ENST00000513769 RARBP10826 455 aa10.71□□□□□ -0.69
TPM3-221ENST00000513769 UCHL3P15374 230 aa10.71□□□□□ -0.69
TPM3-221ENST00000513769 PROZP22891 400 aa10.71□□□□□ -0.69
TPM3-221ENST00000513769 CST5P28325 142 aaPredicted RBP10.71□□□□□ -0.69
TPM3-221ENST00000513769 AXLP30530 894 aa10.71□□□□□ -0.69
TPM3-221ENST00000513769 HOXC8P31273 242 aa10.71□□□□□ -0.69
TPM3-221ENST00000513769 GPC3P51654 580 aa10.71□□□□□ -0.69
TPM3-221ENST00000513769 CYP24A1Q07973 514 aa10.71□□□□□ -0.69
TPM3-221ENST00000513769 PRPF4BQ13523 1007 aaKnown RBP10.71□□□□□ -0.69
TPM3-221ENST00000513769 PTPN14Q15678 1187 aa10.71□□□□□ -0.69
TPM3-221ENST00000513769 DCAF17Q5H9S7 520 aaPredicted RBP10.71□□□□□ -0.69
TPM3-221ENST00000513769 GNASQ5JWF2 1037 aa10.71□□□□□ -0.69
TPM3-221ENST00000513769 GJC2Q5T442 439 aaPredicted RBP10.71□□□□□ -0.69
TPM3-221ENST00000513769 SFMBT2Q5VUG0 894 aa10.71□□□□□ -0.69
TPM3-221ENST00000513769 TAF2Q6P1X5 1199 aa10.71□□□□□ -0.69
TPM3-221ENST00000513769 NFRKBQ6P4R8 1299 aa10.71□□□□□ -0.69
TPM3-221ENST00000513769 SLC39A4Q6P5W5 647 aa10.71□□□□□ -0.69
TPM3-221ENST00000513769 WDR59Q6PJI9 974 aa10.71□□□□□ -0.69
TPM3-221ENST00000513769 ENOSF1Q7L5Y1 443 aa10.71□□□□□ -0.69
TPM3-221ENST00000513769 RPAINQ86UA6 219 aa10.71□□□□□ -0.69
TPM3-221ENST00000513769 TRIM50Q86XT4 487 aa10.71□□□□□ -0.69
TPM3-221ENST00000513769 LMO3Q8TAP4 145 aa10.71□□□□□ -0.69
TPM3-221ENST00000513769 UBE2Q2Q8WVN8 375 aa10.71□□□□□ -0.69
TPM3-221ENST00000513769 BAP1Q92560 729 aa10.71□□□□□ -0.69
TPM3-221ENST00000513769 CCDC42Q96M95 316 aa10.71□□□□□ -0.69
TPM3-221ENST00000513769 FNBP1Q96RU3 617 aa10.71□□□□□ -0.69
TPM3-221ENST00000513769 EIF3CQ99613 913 aaKnown RBP10.71□□□□□ -0.69
TPM3-221ENST00000513769 MTG1Q9BT17 334 aaPredicted RBP10.71□□□□□ -0.69
TPM3-221ENST00000513769 TCHPQ9BT92 498 aa10.71□□□□□ -0.69
TPM3-221ENST00000513769 LUC7LQ9NQ29 371 aaKnown RBP10.71□□□□□ -0.69
TPM3-221ENST00000513769 FAM207AQ9NSI2 230 aaPredicted RBP10.71□□□□□ -0.69
TPM3-221ENST00000513769 GABRQQ9UN88 632 aa10.71□□□□□ -0.69
TPM3-221ENST00000513769 ARID2Q68CP9 1835 aa10.7□□□□□ -0.7
TPM3-221ENST00000513769 A0A1B0GUA9 196 aa10.7□□□□□ -0.7
TPM3-221ENST00000513769 ADCY6O43306 1168 aa10.7□□□□□ -0.7
TPM3-221ENST00000513769 ZMYND10O75800 440 aa10.7□□□□□ -0.7
TPM3-221ENST00000513769 DXOO77932 396 aaKnown RBP10.7□□□□□ -0.7
TPM3-221ENST00000513769 SERPING1P05155 500 aa10.7□□□□□ -0.7
TPM3-221ENST00000513769 PRKCBP05771 671 aa10.7□□□□□ -0.7
TPM3-221ENST00000513769 SMIM10L2AP0DMW4 78 aa10.7□□□□□ -0.7
TPM3-221ENST00000513769 SMIM10L2BP0DMW5 78 aa10.7□□□□□ -0.7
TPM3-221ENST00000513769 SLC9A1P19634 815 aa10.7□□□□□ -0.7
TPM3-221ENST00000513769 PRKCIP41743 596 aa10.7□□□□□ -0.7
TPM3-221ENST00000513769 POLR2FP61218 127 aaKnown RBP10.7□□□□□ -0.7
TPM3-221ENST00000513769 PURAQ00577 322 aaKnown RBP10.7□□□□□ -0.7
TPM3-221ENST00000513769 PTPN11Q06124 597 aaPredicted RBP10.7□□□□□ -0.7
TPM3-221ENST00000513769 CACNB2Q08289 660 aaPredicted RBP10.7□□□□□ -0.7
TPM3-221ENST00000513769 DRP2Q13474 957 aa10.7□□□□□ -0.7
TPM3-221ENST00000513769 MAP3K21Q5TCX8 1036 aa10.7□□□□□ -0.7
TPM3-221ENST00000513769 TRIM65Q6PJ69 517 aa10.7□□□□□ -0.7
TPM3-221ENST00000513769 MPZL3Q6UWV2 235 aa10.7□□□□□ -0.7
TPM3-221ENST00000513769 RRAGAQ7L523 313 aa10.7□□□□□ -0.7
TPM3-221ENST00000513769 SESTD1Q86VW0 696 aa10.7□□□□□ -0.7
TPM3-221ENST00000513769 NT5DC4Q86YG4 428 aa10.7□□□□□ -0.7
TPM3-221ENST00000513769 CD302Q8IX05 232 aa10.7□□□□□ -0.7
TPM3-221ENST00000513769 LRRC71Q8N4P6 559 aa10.7□□□□□ -0.7
TPM3-221ENST00000513769 C7orf31Q8N865 590 aa10.7□□□□□ -0.7
TPM3-221ENST00000513769 FBXL13Q8NEE6 735 aa10.7□□□□□ -0.7
TPM3-221ENST00000513769 KLHDC9Q8NEP7 349 aa10.7□□□□□ -0.7
TPM3-221ENST00000513769 TRIB2Q92519 343 aa10.7□□□□□ -0.7
TPM3-221ENST00000513769 TSEN34Q9BSV6 310 aaKnown RBP10.7□□□□□ -0.7
TPM3-221ENST00000513769 MSTO1Q9BUK6 570 aa10.7□□□□□ -0.7
TPM3-221ENST00000513769 KIFC3Q9BVG8 833 aa10.7□□□□□ -0.7
TPM3-221ENST00000513769 TARS2Q9BW92 718 aaKnown RBP10.7□□□□□ -0.7
TPM3-221ENST00000513769 GCOM2Q9BZD3 368 aaPredicted RBP10.7□□□□□ -0.7
TPM3-221ENST00000513769 NHEJ1Q9H9Q4 299 aaPredicted RBP10.7□□□□□ -0.7
TPM3-221ENST00000513769 MYO1AQ9UBC5 1043 aa10.7□□□□□ -0.7
TPM3-221ENST00000513769 PPP2R2CQ9Y2T4 447 aa10.7□□□□□ -0.7
TPM3-221ENST00000513769 INO80B-WBP1J3KQ70 363 aa10.69□□□□□ -0.7
TPM3-221ENST00000513769 IL18RAPO95256 599 aa10.69□□□□□ -0.7
TPM3-221ENST00000513769 NDUFA10O95299 355 aa10.69□□□□□ -0.7
TPM3-221ENST00000513769 C4BPAP04003 597 aaKnown RBP10.69□□□□□ -0.7
TPM3-221ENST00000513769 HMGCRP04035 888 aa10.69□□□□□ -0.7
TPM3-221ENST00000513769 ADRB2P07550 413 aa10.69□□□□□ -0.7
TPM3-221ENST00000513769 MCF2P10911 925 aa10.69□□□□□ -0.7
TPM3-221ENST00000513769 FERP16591 822 aa10.69□□□□□ -0.7
TPM3-221ENST00000513769 STAT1P42224 750 aa10.69□□□□□ -0.7
TPM3-221ENST00000513769 TERF1P54274 439 aa10.69□□□□□ -0.7
TPM3-221ENST00000513769 NLRP11P59045 1033 aaKnown RBP10.69□□□□□ -0.7
TPM3-221ENST00000513769 PRKCZQ05513 592 aa10.69□□□□□ -0.7
TPM3-221ENST00000513769 MBTD1Q05BQ5 628 aa10.69□□□□□ -0.7
TPM3-221ENST00000513769 SPA17Q15506 151 aa10.69□□□□□ -0.7
TPM3-221ENST00000513769 EPC2Q52LR7 807 aa10.69□□□□□ -0.7
TPM3-221ENST00000513769 C1orf220Q5T0J3 134 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 326.7 ms