RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 PRORYQ9H606 182 aa13.31□□□□□ -0.28
SFXN1-210ENST00000513725 WDR27A2RRH5 827 aa13.3□□□□□ -0.28
SFXN1-210ENST00000513725 NRG2O14511 850 aaPredicted RBP13.3□□□□□ -0.28
SFXN1-210ENST00000513725 VIPR2P41587 438 aa13.3□□□□□ -0.28
SFXN1-210ENST00000513725 GRM4Q14833 912 aa13.3□□□□□ -0.28
SFXN1-210ENST00000513725 TRIP6Q15654 476 aaKnown RBP13.3□□□□□ -0.28
SFXN1-210ENST00000513725 PRSS36Q5K4E3 855 aa13.3□□□□□ -0.28
SFXN1-210ENST00000513725 E2F7Q96AV8 911 aa13.3□□□□□ -0.28
SFXN1-210ENST00000513725 DCBLD2Q96PD2 775 aa13.3□□□□□ -0.28
SFXN1-210ENST00000513725 HHIPQ96QV1 700 aa13.3□□□□□ -0.28
SFXN1-210ENST00000513725 TTPALQ9BTX7 342 aa13.3□□□□□ -0.28
SFXN1-210ENST00000513725 PSTPIP2Q9H939 334 aa13.3□□□□□ -0.28
SFXN1-210ENST00000513725 PCDHA6Q9UN73 950 aa13.3□□□□□ -0.28
SFXN1-210ENST00000513725 PCDHB9Q9Y5E1 797 aa13.3□□□□□ -0.28
SFXN1-210ENST00000513725 PCDHA8Q9Y5H6 950 aa13.3□□□□□ -0.28
SFXN1-210ENST00000513725 MYH9P35579 1960 aaKnown RBP13.3□□□□□ -0.28
SFXN1-210ENST00000513725 SF3B1O75533 1304 aaKnown RBP eCLIP13.3□□□□□ -0.289e-6■■■■■ 68.9
SFXN1-210ENST00000513725 TTC41PQ6P2S7 1318 aa13.3□□□□□ -0.28
SFXN1-210ENST00000513725 A0A087WZ62 844 aa13.29□□□□□ -0.28
SFXN1-210ENST00000513725 HEPACAM2A8MVW5 462 aa13.29□□□□□ -0.28
SFXN1-210ENST00000513725 FTH1P19P0C7X4 201 aa13.29□□□□□ -0.28
SFXN1-210ENST00000513725 ITGA4P13612 1032 aa13.29□□□□□ -0.28
SFXN1-210ENST00000513725 DHPSP49366 369 aaPredicted RBP13.29□□□□□ -0.28
SFXN1-210ENST00000513725 CYP4F3Q08477 520 aa13.29□□□□□ -0.28
SFXN1-210ENST00000513725 RAB33AQ14088 237 aa13.29□□□□□ -0.28
SFXN1-210ENST00000513725 MAPK6Q16659 721 aa13.29□□□□□ -0.28
SFXN1-210ENST00000513725 MCMDC2Q4G0Z9 681 aa13.29□□□□□ -0.28
SFXN1-210ENST00000513725 KRT25Q7Z3Z0 450 aa13.29□□□□□ -0.28
SFXN1-210ENST00000513725 CEP57Q86XR8 500 aa13.29□□□□□ -0.28
SFXN1-210ENST00000513725 PNPLA1Q8N8W4 532 aa13.29□□□□□ -0.28
SFXN1-210ENST00000513725 FAM181AQ8N9Y4 354 aa13.29□□□□□ -0.28
SFXN1-210ENST00000513725 CNNM3Q8NE01 707 aa13.29□□□□□ -0.28
SFXN1-210ENST00000513725 LNX1Q8TBB1 728 aaPredicted RBP13.29□□□□□ -0.28
SFXN1-210ENST00000513725 CORO1BQ9BR76 489 aa13.29□□□□□ -0.28
SFXN1-210ENST00000513725 FDXACB1Q9BRP7 624 aaPredicted RBP13.29□□□□□ -0.28
SFXN1-210ENST00000513725 TRPV4Q9HBA0 871 aa13.29□□□□□ -0.28
SFXN1-210ENST00000513725 EBF1Q9UH73 591 aa13.29□□□□□ -0.28
SFXN1-210ENST00000513725 COL12A1Q99715 3063 aa13.28□□□□□ -0.28
SFXN1-210ENST00000513725 ARL5CA6NH57 179 aa13.28□□□□□ -0.28
SFXN1-210ENST00000513725 PYCARD-AS1I3L0S3 204 aa13.28□□□□□ -0.28
SFXN1-210ENST00000513725 OPHN1O60890 802 aa13.28□□□□□ -0.28
SFXN1-210ENST00000513725 APBB3O95704 486 aa13.28□□□□□ -0.28
SFXN1-210ENST00000513725 LRG1P02750 347 aa13.28□□□□□ -0.28
SFXN1-210ENST00000513725 CEP55Q53EZ4 464 aa13.28□□□□□ -0.28
SFXN1-210ENST00000513725 USP39Q53GS9 565 aaKnown RBP13.28□□□□□ -0.28
SFXN1-210ENST00000513725 PDZD4Q76G19 769 aaPredicted RBP13.28□□□□□ -0.28
SFXN1-210ENST00000513725 ZNF410Q86VK4 478 aa13.28□□□□□ -0.28
SFXN1-210ENST00000513725 TTC8Q8TAM2 541 aa13.28□□□□□ -0.28
SFXN1-210ENST00000513725 PANK1Q8TE04 598 aa13.28□□□□□ -0.28
SFXN1-210ENST00000513725 TCEAL4Q96EI5 215 aa13.28□□□□□ -0.28
SFXN1-210ENST00000513725 ZSWIM3Q96MP5 696 aa13.28□□□□□ -0.28
SFXN1-210ENST00000513725 FCRL3Q96P31 734 aaPredicted RBP13.28□□□□□ -0.28
SFXN1-210ENST00000513725 GAD1Q99259 594 aa13.28□□□□□ -0.28
SFXN1-210ENST00000513725 NRBP2Q9NSY0 501 aa13.28□□□□□ -0.28
SFXN1-210ENST00000513725 AGPAT5Q9NUQ2 364 aa13.28□□□□□ -0.28
SFXN1-210ENST00000513725 SEC63Q9UGP8 760 aaKnown RBP13.28□□□□□ -0.28
SFXN1-210ENST00000513725 APOBEC2Q9Y235 224 aaKnown RBP13.28□□□□□ -0.28
SFXN1-210ENST00000513725 STK24Q9Y6E0 443 aa13.28□□□□□ -0.28
SFXN1-210ENST00000513725 THADAQ6YHU6 1953 aa13.27□□□□□ -0.28
SFXN1-210ENST00000513725 ABCA7Q8IZY2 2146 aa13.27□□□□□ -0.28
SFXN1-210ENST00000513725 TEX51A0A1B0GUA7 166 aa13.27□□□□□ -0.29
SFXN1-210ENST00000513725 ADAM12O43184 909 aa13.27□□□□□ -0.29
SFXN1-210ENST00000513725 KRT38O76015 456 aa13.27□□□□□ -0.29
SFXN1-210ENST00000513725 MLH1P40692 756 aa13.27□□□□□ -0.29
SFXN1-210ENST00000513725 SCNN1GP51170 649 aa13.27□□□□□ -0.29
SFXN1-210ENST00000513725 SPIRE1Q08AE8 756 aa13.27□□□□□ -0.29
SFXN1-210ENST00000513725 UBE2SQ16763 222 aa13.27□□□□□ -0.29
SFXN1-210ENST00000513725 CYP4A22Q5TCH4 519 aa13.27□□□□□ -0.29
SFXN1-210ENST00000513725 FAM171A1Q5VUB5 890 aa13.27□□□□□ -0.29
SFXN1-210ENST00000513725 PPP4R3CPQ6ZMV5 832 aa13.27□□□□□ -0.29
SFXN1-210ENST00000513725 PLEKHM2Q8IWE5 1019 aa13.27□□□□□ -0.29
SFXN1-210ENST00000513725 ZSCAN18Q8TBC5 510 aaPredicted RBP13.27□□□□□ -0.29
SFXN1-210ENST00000513725 PI4K2BQ8TCG2 481 aa13.27□□□□□ -0.29
SFXN1-210ENST00000513725 RRP36Q96EU6 259 aaKnown RBP13.27□□□□□ -0.29
SFXN1-210ENST00000513725 SEPT9Q9UHD8 586 aaPredicted RBP13.27□□□□□ -0.29
SFXN1-210ENST00000513725 TCEAL9Q9UHQ7 104 aa13.27□□□□□ -0.29
SFXN1-210ENST00000513725 MBD1Q9UIS9 605 aaPredicted RBP13.27□□□□□ -0.29
SFXN1-210ENST00000513725 VWA8A3KMH1 1905 aa13.27□□□□□ -0.29
SFXN1-210ENST00000513725 COL6A6A6NMZ7 2263 aa13.27□□□□□ -0.29
SFXN1-210ENST00000513725 SPTAN1Q13813 2472 aaKnown RBP13.27□□□□□ -0.29
SFXN1-210ENST00000513725 TDRD15B5MCY1 1934 aaKnown RBP13.26□□□□□ -0.29
SFXN1-210ENST00000513725 PSAPP07602 524 aa13.26□□□□□ -0.29
SFXN1-210ENST00000513725 OR1D2P34982 312 aa13.26□□□□□ -0.29
SFXN1-210ENST00000513725 DNM2P50570 870 aa13.26□□□□□ -0.29
SFXN1-210ENST00000513725 DGKEP52429 567 aa13.26□□□□□ -0.29
SFXN1-210ENST00000513725 FCHO2Q0JRZ9 810 aa13.26□□□□□ -0.29
SFXN1-210ENST00000513725 GRSF1Q12849 480 aaKnown RBP eCLIP13.26□□□□□ -0.29
SFXN1-210ENST00000513725 LRRC69Q6ZNQ3 347 aa13.26□□□□□ -0.29
SFXN1-210ENST00000513725 TOGARAM2Q6ZUX3 1019 aa13.26□□□□□ -0.29
SFXN1-210ENST00000513725 HAUS6Q7Z4H7 955 aa13.26□□□□□ -0.29
SFXN1-210ENST00000513725 SPATA18Q8TC71 538 aa13.26□□□□□ -0.29
SFXN1-210ENST00000513725 TMEM209Q96SK2 561 aa13.26□□□□□ -0.29
SFXN1-210ENST00000513725 GTPBP2Q9BX10 602 aaKnown RBP13.26□□□□□ -0.29
SFXN1-210ENST00000513725 KRT23Q9C075 422 aa13.26□□□□□ -0.29
SFXN1-210ENST00000513725 POLMQ9NP87 494 aaPredicted RBP13.26□□□□□ -0.29
SFXN1-210ENST00000513725 GTSE1Q9NYZ3 720 aa13.26□□□□□ -0.29
SFXN1-210ENST00000513725 GABBR1Q9UBS5 961 aa13.26□□□□□ -0.29
SFXN1-210ENST00000513725 INVSQ9Y283 1065 aa13.26□□□□□ -0.29
SFXN1-210ENST00000513725 TRABD2BA6NFA1 517 aa13.25□□□□□ -0.29
SFXN1-210ENST00000513725 MEIS1O00470 390 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms