RNA–Protein interactions for RNA: ENST00000513248.1

NUP54-212, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-212ENST00000513248 SYNPO2Q9UMS6 1093 aa4.99□□□□□ -1.61
NUP54-212ENST00000513248 RBM8AQ9Y5S9 174 aaKnown RBP4.99□□□□□ -1.61
NUP54-212ENST00000513248 CFAP65Q6ZU64 1925 aaKnown RBP4.99□□□□□ -1.61
NUP54-212ENST00000513248 NEURL4Q96JN8 1562 aa4.99□□□□□ -1.61
NUP54-212ENST00000513248 ADGRB3O60242 1522 aa4.98□□□□□ -1.61
NUP54-212ENST00000513248 UBR1Q8IWV7 1749 aa4.98□□□□□ -1.61
NUP54-212ENST00000513248 BPIFB4P59827 614 aa4.98□□□□□ -1.61
NUP54-212ENST00000513248 SRSF2Q01130 221 aaKnown RBP4.98□□□□□ -1.61
NUP54-212ENST00000513248 PPARAQ07869 468 aa4.98□□□□□ -1.61
NUP54-212ENST00000513248 TCIRG1Q13488 830 aa4.98□□□□□ -1.61
NUP54-212ENST00000513248 RIN1Q13671 783 aa4.98□□□□□ -1.61
NUP54-212ENST00000513248 FHL2Q14192 279 aa4.98□□□□□ -1.61
NUP54-212ENST00000513248 MAN2A1Q16706 1144 aa4.98□□□□□ -1.61
NUP54-212ENST00000513248 RNF207Q6ZRF8 634 aa4.98□□□□□ -1.61
NUP54-212ENST00000513248 TAS1R1Q7RTX1 841 aa4.98□□□□□ -1.61
NUP54-212ENST00000513248 AUTS2Q8WXX7 1259 aa4.98□□□□□ -1.61
NUP54-212ENST00000513248 RABGGTAQ92696 567 aa4.98□□□□□ -1.61
NUP54-212ENST00000513248 EDAQ92838 391 aa4.98□□□□□ -1.61
NUP54-212ENST00000513248 ZNF503Q96F45 646 aa4.98□□□□□ -1.61
NUP54-212ENST00000513248 AGO3Q9H9G7 860 aaKnown RBP4.98□□□□□ -1.61
NUP54-212ENST00000513248 TCF7L1Q9HCS4 588 aa4.98□□□□□ -1.61
NUP54-212ENST00000513248 USP18Q9UMW8 372 aa4.98□□□□□ -1.61
NUP54-212ENST00000513248 ARHGAP23Q9P227 1491 aa4.98□□□□□ -1.61
NUP54-212ENST00000513248 UNC13BO14795 1591 aa4.98□□□□□ -1.61
NUP54-212ENST00000513248 SYNMO15061 1565 aa4.98□□□□□ -1.61
NUP54-212ENST00000513248 VWDEQ8N2E2 1590 aa4.98□□□□□ -1.61
NUP54-212ENST00000513248 TET3O43151 1660 aa4.98□□□□□ -1.61
NUP54-212ENST00000513248 WASHC2AQ641Q2 1341 aa4.97□□□□□ -1.61
NUP54-212ENST00000513248 WDR33Q9C0J8 1336 aaKnown RBP4.97□□□□□ -1.61
NUP54-212ENST00000513248 SLIT1O75093 1534 aa4.97□□□□□ -1.61
NUP54-212ENST00000513248 MSH6P52701 1360 aa4.97□□□□□ -1.61
NUP54-212ENST00000513248 TMEM94Q12767 1356 aa4.97□□□□□ -1.61
NUP54-212ENST00000513248 PLEKHG1Q9ULL1 1385 aa4.97□□□□□ -1.61
NUP54-212ENST00000513248 SHTN1A0MZ66 631 aa4.97□□□□□ -1.61
NUP54-212ENST00000513248 NRP2O60462 931 aa4.97□□□□□ -1.61
NUP54-212ENST00000513248 FSBPO95073 299 aa4.97□□□□□ -1.61
NUP54-212ENST00000513248 MTHFD2P13995 350 aa4.97□□□□□ -1.61
NUP54-212ENST00000513248 ATF3P18847 181 aa4.97□□□□□ -1.61
NUP54-212ENST00000513248 MSX2P35548 267 aaPredicted RBP4.97□□□□□ -1.61
NUP54-212ENST00000513248 WASP42768 502 aa4.97□□□□□ -1.61
NUP54-212ENST00000513248 MEF2AQ02078 507 aaPredicted RBP4.97□□□□□ -1.61
NUP54-212ENST00000513248 PPP3CAQ08209 521 aa4.97□□□□□ -1.61
NUP54-212ENST00000513248 SAFB2Q14151 953 aaKnown RBP eCLIP4.97□□□□□ -1.61
NUP54-212ENST00000513248 ACAP1Q15027 740 aa4.97□□□□□ -1.61
NUP54-212ENST00000513248 PCBP2Q15366 365 aaKnown RBP eCLIP4.97□□□□□ -1.61
NUP54-212ENST00000513248 ADRM1Q16186 407 aa4.97□□□□□ -1.61
NUP54-212ENST00000513248 ABCB5Q2M3G0 1257 aa4.97□□□□□ -1.61
NUP54-212ENST00000513248 GAGE13Q4V321 117 aa4.97□□□□□ -1.61
NUP54-212ENST00000513248 C19orf54Q5BKX5 351 aa4.97□□□□□ -1.61
NUP54-212ENST00000513248 TOR2AQ5JU69 321 aa4.97□□□□□ -1.61
NUP54-212ENST00000513248 ADGRE4PQ86SQ3 457 aa4.97□□□□□ -1.61
NUP54-212ENST00000513248 ANKRD13AQ8IZ07 590 aa4.97□□□□□ -1.61
NUP54-212ENST00000513248 LILRA3Q8N6C8 439 aaPredicted RBP4.97□□□□□ -1.61
NUP54-212ENST00000513248 PLA2G15Q8NCC3 412 aa4.97□□□□□ -1.61
NUP54-212ENST00000513248 JADE3Q92613 823 aa4.97□□□□□ -1.61
NUP54-212ENST00000513248 HOXB13Q92826 284 aaPredicted RBP4.97□□□□□ -1.61
NUP54-212ENST00000513248 ADOQ96SZ5 270 aa4.97□□□□□ -1.61
NUP54-212ENST00000513248 GPHA2Q96T91 129 aa4.97□□□□□ -1.61
NUP54-212ENST00000513248 ZNF341Q9BYN7 854 aa4.97□□□□□ -1.61
NUP54-212ENST00000513248 IFT122Q9HBG6 1241 aa4.97□□□□□ -1.61
NUP54-212ENST00000513248 DPP7Q9UHL4 492 aa4.97□□□□□ -1.61
NUP54-212ENST00000513248 EDARQ9UNE0 448 aa4.97□□□□□ -1.61
NUP54-212ENST00000513248 THRAP3Q9Y2W1 955 aaKnown RBP4.97□□□□□ -1.61
NUP54-212ENST00000513248 GPR45Q9Y5Y3 372 aa4.97□□□□□ -1.61
NUP54-212ENST00000513248 LRRC7Q96NW7 1537 aa4.97□□□□□ -1.61
NUP54-212ENST00000513248 NAIPQ13075 1403 aa4.97□□□□□ -1.61
NUP54-212ENST00000513248 GCC2Q8IWJ2 1684 aa4.96□□□□□ -1.61
NUP54-212ENST00000513248 A0A1W2PRX2 142 aa4.96□□□□□ -1.62
NUP54-212ENST00000513248 NPIPB8E9PQR5 432 aa4.96□□□□□ -1.62
NUP54-212ENST00000513248 DAPK3O43293 454 aa4.96□□□□□ -1.62
NUP54-212ENST00000513248 CFBP00751 764 aa4.96□□□□□ -1.62
NUP54-212ENST00000513248 VSIG10L2P0DP72 767 aa4.96□□□□□ -1.62
NUP54-212ENST00000513248 ACO1P21399 889 aaKnown RBP4.96□□□□□ -1.62
NUP54-212ENST00000513248 KIR2DL3P43628 341 aa4.96□□□□□ -1.62
NUP54-212ENST00000513248 MCL1Q07820 350 aa4.96□□□□□ -1.62
NUP54-212ENST00000513248 ABHD18Q0P651 414 aa4.96□□□□□ -1.62
NUP54-212ENST00000513248 FOXL1Q12952 345 aa4.96□□□□□ -1.62
NUP54-212ENST00000513248 SPIDRQ14159 915 aa4.96□□□□□ -1.62
NUP54-212ENST00000513248 GRM7Q14831 915 aa4.96□□□□□ -1.62
NUP54-212ENST00000513248 ODF1Q14990 250 aa4.96□□□□□ -1.62
NUP54-212ENST00000513248 PLEKHG6Q3KR16 790 aa4.96□□□□□ -1.62
NUP54-212ENST00000513248 BTNL9Q6UXG8 535 aa4.96□□□□□ -1.62
NUP54-212ENST00000513248 MSL3Q8N5Y2 521 aaKnown RBP4.96□□□□□ -1.62
NUP54-212ENST00000513248 ANKRD53Q8N9V6 530 aa4.96□□□□□ -1.62
NUP54-212ENST00000513248 MTMR8Q96EF0 704 aa4.96□□□□□ -1.62
NUP54-212ENST00000513248 FAM89AQ96GI7 184 aa4.96□□□□□ -1.62
NUP54-212ENST00000513248 TMEM176AQ96HP8 235 aa4.96□□□□□ -1.62
NUP54-212ENST00000513248 RPL10LQ96L21 214 aaKnown RBP4.96□□□□□ -1.62
NUP54-212ENST00000513248 QRSL1Q9H0R6 528 aaKnown RBP4.96□□□□□ -1.62
NUP54-212ENST00000513248 C14orf93Q9H972 538 aaKnown RBP4.96□□□□□ -1.62
NUP54-212ENST00000513248 DNAJC28Q9NX36 388 aa4.96□□□□□ -1.62
NUP54-212ENST00000513248 PLA2G3Q9NZ20 509 aa4.96□□□□□ -1.62
NUP54-212ENST00000513248 TUBD1Q9UJT1 453 aa4.96□□□□□ -1.62
NUP54-212ENST00000513248 IQGAP3Q86VI3 1631 aa4.96□□□□□ -1.62
NUP54-212ENST00000513248 HFM1A2PYH4 1435 aa4.96□□□□□ -1.62
NUP54-212ENST00000513248 TOX4O94842 621 aa4.95□□□□□ -1.62
NUP54-212ENST00000513248 ZRANB2O95218 330 aaKnown RBP eCLIP4.95□□□□□ -1.62
NUP54-212ENST00000513248 CTSSP25774 331 aa4.95□□□□□ -1.62
NUP54-212ENST00000513248 NEK2P51955 445 aa4.95□□□□□ -1.62
NUP54-212ENST00000513248 INHBEP58166 350 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms