RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 CBX2Q14781 532 aaPredicted RBP8.05□□□□□ -1.12
USP46-208ENST00000512656 NONOQ15233 471 aaKnown RBP eCLIP8.05□□□□□ -1.12
USP46-208ENST00000512656 TARBP2Q15633 366 aaKnown RBP8.05□□□□□ -1.12
USP46-208ENST00000512656 UGCGQ16739 394 aa8.05□□□□□ -1.12
USP46-208ENST00000512656 MTERF2Q49AM1 385 aa8.05□□□□□ -1.12
USP46-208ENST00000512656 PLPP4Q5VZY2 271 aa8.05□□□□□ -1.12
USP46-208ENST00000512656 TMEM184AQ6ZMB5 413 aa8.05□□□□□ -1.12
USP46-208ENST00000512656 ZNF410Q86VK4 478 aa8.05□□□□□ -1.12
USP46-208ENST00000512656 TMEM87AQ8NBN3 555 aa8.05□□□□□ -1.12
USP46-208ENST00000512656 DAGLBQ8NCG7 672 aa8.05□□□□□ -1.12
USP46-208ENST00000512656 TRIM11Q96F44 468 aa8.05□□□□□ -1.12
USP46-208ENST00000512656 SUSD3Q96L08 255 aa8.05□□□□□ -1.12
USP46-208ENST00000512656 CASD1Q96PB1 797 aa8.05□□□□□ -1.12
USP46-208ENST00000512656 NAP1L4Q99733 375 aaKnown RBP8.05□□□□□ -1.12
USP46-208ENST00000512656 TCF25Q9BQ70 676 aa8.05□□□□□ -1.12
USP46-208ENST00000512656 C2orf49Q9BVC5 232 aaPredicted RBP8.05□□□□□ -1.12
USP46-208ENST00000512656 BRD7Q9NPI1 651 aa8.05□□□□□ -1.12
USP46-208ENST00000512656 PPME1Q9Y570 386 aa8.05□□□□□ -1.12
USP46-208ENST00000512656 PCDHGC5Q9Y5F6 944 aa8.05□□□□□ -1.12
USP46-208ENST00000512656 CACNA1HO95180 2353 aa8.05□□□□□ -1.12
USP46-208ENST00000512656 EVPLQ92817 2033 aa8.05□□□□□ -1.12
USP46-208ENST00000512656 LOXHD1Q8IVV2 1947 aa8.04□□□□□ -1.12
USP46-208ENST00000512656 WDR87Q6ZQQ6 2873 aa8.04□□□□□ -1.12
USP46-208ENST00000512656 CCDC194A0A1B0GVG4 234 aa8.04□□□□□ -1.12
USP46-208ENST00000512656 SFI1A8K8P3 1242 aa8.04□□□□□ -1.12
USP46-208ENST00000512656 C1QTNF9BB2RNN3 333 aa8.04□□□□□ -1.12
USP46-208ENST00000512656 EDIL3O43854 480 aa8.04□□□□□ -1.12
USP46-208ENST00000512656 MARCH6O60337 910 aa8.04□□□□□ -1.12
USP46-208ENST00000512656 MAFO75444 373 aaPredicted RBP8.04□□□□□ -1.12
USP46-208ENST00000512656 TDP2O95551 362 aa8.04□□□□□ -1.12
USP46-208ENST00000512656 GLP2RO95838 553 aa8.04□□□□□ -1.12
USP46-208ENST00000512656 GCFC2P16383 781 aaKnown RBP8.04□□□□□ -1.12
USP46-208ENST00000512656 TECP42680 631 aa8.04□□□□□ -1.12
USP46-208ENST00000512656 RAB27AP51159 221 aa8.04□□□□□ -1.12
USP46-208ENST00000512656 PSMC5P62195 406 aa8.04□□□□□ -1.12
USP46-208ENST00000512656 TYRO3Q06418 890 aa8.04□□□□□ -1.12
USP46-208ENST00000512656 TOB2Q14106 344 aaPredicted RBP8.04□□□□□ -1.12
USP46-208ENST00000512656 SMC1AQ14683 1233 aaKnown RBP8.04□□□□□ -1.12
USP46-208ENST00000512656 TWF2Q6IBS0 349 aaKnown RBP8.04□□□□□ -1.12
USP46-208ENST00000512656 CES5AQ6NT32 575 aa8.04□□□□□ -1.12
USP46-208ENST00000512656 GLB1LQ6UWU2 654 aa8.04□□□□□ -1.12
USP46-208ENST00000512656 LRRC55Q6ZSA7 311 aa8.04□□□□□ -1.12
USP46-208ENST00000512656 HFE2Q6ZVN8 426 aa8.04□□□□□ -1.12
USP46-208ENST00000512656 BMP8AQ7Z5Y6 402 aa8.04□□□□□ -1.12
USP46-208ENST00000512656 CD163Q86VB7 1156 aa8.04□□□□□ -1.12
USP46-208ENST00000512656 HELQQ8TDG4 1101 aa8.04□□□□□ -1.12
USP46-208ENST00000512656 SUSD6Q92537 303 aa8.04□□□□□ -1.12
USP46-208ENST00000512656 CASP10Q92851 521 aa8.04□□□□□ -1.12
USP46-208ENST00000512656 TMEM169Q96HH4 297 aa8.04□□□□□ -1.12
USP46-208ENST00000512656 ZNF668Q96K58 619 aaPredicted RBP8.04□□□□□ -1.12
USP46-208ENST00000512656 RPGRIP1Q96KN7 1286 aa8.04□□□□□ -1.12
USP46-208ENST00000512656 FAM20AQ96MK3 541 aa8.04□□□□□ -1.12
USP46-208ENST00000512656 CEP63Q96MT8 703 aa8.04□□□□□ -1.12
USP46-208ENST00000512656 MBOAT7Q96N66 472 aa8.04□□□□□ -1.12
USP46-208ENST00000512656 SLC30A3Q99726 388 aa8.04□□□□□ -1.12
USP46-208ENST00000512656 PRRX2Q99811 253 aa8.04□□□□□ -1.12
USP46-208ENST00000512656 TRAIPQ9BWF2 469 aa8.04□□□□□ -1.12
USP46-208ENST00000512656 SLKQ9H2G2 1235 aaPredicted RBP8.04□□□□□ -1.12
USP46-208ENST00000512656 PDRG1Q9NUG6 133 aa8.04□□□□□ -1.12
USP46-208ENST00000512656 RNF19AQ9NV58 838 aa8.04□□□□□ -1.12
USP46-208ENST00000512656 SUCLA2Q9P2R7 463 aaPredicted RBP8.04□□□□□ -1.12
USP46-208ENST00000512656 STK39Q9UEW8 545 aa8.04□□□□□ -1.12
USP46-208ENST00000512656 DDX25Q9UHL0 483 aaKnown RBP8.04□□□□□ -1.12
USP46-208ENST00000512656 ZFHX2Q9C0A1 2572 aaPredicted RBP8.04□□□□□ -1.12
USP46-208ENST00000512656 WDFY4Q6ZS81 3184 aa8.04□□□□□ -1.12
USP46-208ENST00000512656 A0A087WZ62 844 aa8.03□□□□□ -1.12
USP46-208ENST00000512656 IGKV6-21A0A0C4DH24 114 aa8.03□□□□□ -1.12
USP46-208ENST00000512656 TMEM221A6NGB7 291 aa8.03□□□□□ -1.12
USP46-208ENST00000512656 M0R296 226 aa8.03□□□□□ -1.12
USP46-208ENST00000512656 FGFR4P22455 802 aa8.03□□□□□ -1.12
USP46-208ENST00000512656 QARSP47897 775 aaKnown RBP8.03□□□□□ -1.12
USP46-208ENST00000512656 POLGP54098 1239 aaPredicted RBP8.03□□□□□ -1.12
USP46-208ENST00000512656 ZXDAP98168 799 aa8.03□□□□□ -1.12
USP46-208ENST00000512656 ITIH3Q06033 890 aa8.03□□□□□ -1.12
USP46-208ENST00000512656 STK3Q13188 491 aa8.03□□□□□ -1.12
USP46-208ENST00000512656 GIT2Q14161 759 aa8.03□□□□□ -1.12
USP46-208ENST00000512656 LETM2Q2VYF4 491 aa8.03□□□□□ -1.12
USP46-208ENST00000512656 CLLU1OSQ5K130 101 aa8.03□□□□□ -1.12
USP46-208ENST00000512656 PPP4R3AQ6IN85 833 aa8.03□□□□□ -1.12
USP46-208ENST00000512656 ANKRD54Q6NXT1 300 aa8.03□□□□□ -1.12
USP46-208ENST00000512656 LLGL2Q6P1M3 1020 aa8.03□□□□□ -1.12
USP46-208ENST00000512656 B3GNT9Q6UX72 402 aa8.03□□□□□ -1.12
USP46-208ENST00000512656 OTUD6AQ7L8S5 288 aa8.03□□□□□ -1.12
USP46-208ENST00000512656 CATSPER4Q7RTX7 472 aa8.03□□□□□ -1.12
USP46-208ENST00000512656 NEK8Q86SG6 692 aa8.03□□□□□ -1.12
USP46-208ENST00000512656 RHPN2Q8IUC4 686 aa8.03□□□□□ -1.12
USP46-208ENST00000512656 SUGP1Q8IWZ8 645 aaKnown RBP8.03□□□□□ -1.12
USP46-208ENST00000512656 ALDH16A1Q8IZ83 802 aa8.03□□□□□ -1.12
USP46-208ENST00000512656 SLC39A11Q8N1S5 342 aa8.03□□□□□ -1.12
USP46-208ENST00000512656 MRPL43Q8N983 215 aaKnown RBP8.03□□□□□ -1.12
USP46-208ENST00000512656 ETNPPLQ8TBG4 499 aa8.03□□□□□ -1.12
USP46-208ENST00000512656 SLC7A3Q8WY07 619 aa8.03□□□□□ -1.12
USP46-208ENST00000512656 WASF1Q92558 559 aa8.03□□□□□ -1.12
USP46-208ENST00000512656 PBXIP1Q96AQ6 731 aa8.03□□□□□ -1.12
USP46-208ENST00000512656 PGBD4Q96DM1 585 aa8.03□□□□□ -1.12
USP46-208ENST00000512656 NECTIN4Q96NY8 510 aa8.03□□□□□ -1.12
USP46-208ENST00000512656 FDXACB1Q9BRP7 624 aaPredicted RBP8.03□□□□□ -1.12
USP46-208ENST00000512656 PIN4Q9Y237 131 aaKnown RBP8.03□□□□□ -1.12
USP46-208ENST00000512656 NR2E1Q9Y466 385 aa8.03□□□□□ -1.12
USP46-208ENST00000512656 FNDC1Q4ZHG4 1894 aaPredicted RBP8.02□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms