RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 CENPJQ9HC77 1338 aaPredicted RBP6.84□□□□□ -1.31
TRAPPC11-209ENST00000512476 FANCAO15360 1455 aa6.84□□□□□ -1.31
TRAPPC11-209ENST00000512476 POTEMA6NI47 508 aa6.84□□□□□ -1.31
TRAPPC11-209ENST00000512476 TSPAN3O60637 253 aa6.84□□□□□ -1.31
TRAPPC11-209ENST00000512476 PLA2G6O60733 806 aa6.84□□□□□ -1.31
TRAPPC11-209ENST00000512476 NDUFS2O75306 463 aa6.84□□□□□ -1.31
TRAPPC11-209ENST00000512476 ULK1O75385 1050 aa6.84□□□□□ -1.31
TRAPPC11-209ENST00000512476 ZNF853P0CG23 659 aa6.84□□□□□ -1.31
TRAPPC11-209ENST00000512476 PAMP19021 973 aa6.84□□□□□ -1.31
TRAPPC11-209ENST00000512476 ABCD3P28288 659 aa6.84□□□□□ -1.31
TRAPPC11-209ENST00000512476 HOXA11P31270 313 aaPredicted RBP6.84□□□□□ -1.31
TRAPPC11-209ENST00000512476 SESN3P58005 492 aa6.84□□□□□ -1.31
TRAPPC11-209ENST00000512476 CREB5Q02930 508 aa6.84□□□□□ -1.31
TRAPPC11-209ENST00000512476 CUL4BQ13620 913 aa6.84□□□□□ -1.31
TRAPPC11-209ENST00000512476 KIF4BQ2VIQ3 1234 aa6.84□□□□□ -1.31
TRAPPC11-209ENST00000512476 ACAD10Q6JQN1 1059 aa6.84□□□□□ -1.31
TRAPPC11-209ENST00000512476 POTEGQ6S5H5 508 aa6.84□□□□□ -1.31
TRAPPC11-209ENST00000512476 OLFM4Q6UX06 510 aa6.84□□□□□ -1.31
TRAPPC11-209ENST00000512476 ADAMTSL4Q6UY14 1074 aa6.84□□□□□ -1.31
TRAPPC11-209ENST00000512476 GBP6Q6ZN66 633 aa6.84□□□□□ -1.31
TRAPPC11-209ENST00000512476 PLEKHM3Q6ZWE6 761 aa6.84□□□□□ -1.31
TRAPPC11-209ENST00000512476 MAEAQ7L5Y9 396 aa6.84□□□□□ -1.31
TRAPPC11-209ENST00000512476 SZRD1Q7Z422 152 aa6.84□□□□□ -1.31
TRAPPC11-209ENST00000512476 R3HCC1LQ7Z5L2 792 aaKnown RBP6.84□□□□□ -1.31
TRAPPC11-209ENST00000512476 SLFN11Q7Z7L1 901 aa6.84□□□□□ -1.31
TRAPPC11-209ENST00000512476 CCDC114Q96M63 670 aa6.84□□□□□ -1.31
TRAPPC11-209ENST00000512476 EMILIN2Q9BXX0 1053 aa6.84□□□□□ -1.31
TRAPPC11-209ENST00000512476 CAPS2Q9BXY5 557 aa6.84□□□□□ -1.31
TRAPPC11-209ENST00000512476 PRDM13Q9H4Q3 707 aa6.84□□□□□ -1.31
TRAPPC11-209ENST00000512476 VCPKMTQ9H867 229 aa6.84□□□□□ -1.31
TRAPPC11-209ENST00000512476 CPSF3Q9UKF6 684 aaKnown RBP6.84□□□□□ -1.31
TRAPPC11-209ENST00000512476 NOSIPQ9Y314 301 aaKnown RBP6.84□□□□□ -1.31
TRAPPC11-209ENST00000512476 HRH3Q9Y5N1 445 aa6.84□□□□□ -1.31
TRAPPC11-209ENST00000512476 A0A0U1RQK1 487 aa6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 ZNF320A2RRD8 509 aa6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 DLDP09622 509 aaKnown RBP6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 NEFHP12036 1026 aa6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 DNAJB1P25685 340 aa6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 MSH2P43246 934 aa6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 RBP5P82980 135 aa6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 MC1RQ01726 317 aa6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 RPL6Q02878 288 aaKnown RBP6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 CEP55Q53EZ4 464 aa6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 BOLA3Q53S33 107 aa6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 ARSJQ5FYB0 599 aaPredicted RBP6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 SIRT2Q8IXJ6 389 aa6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 FBXO15Q8NCQ5 510 aaPredicted RBP6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 COG3Q96JB2 828 aa6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 NOX5Q96PH1 765 aa6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 ZBED2Q9BTP6 218 aa6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 FAM129AQ9BZQ8 928 aa6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 MMADHCQ9H3L0 296 aaPredicted RBP6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 MKNK2Q9HBH9 465 aa6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 SLC30A1Q9Y6M5 507 aa6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 MCF2LO15068 1137 aa6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 EFCAB14O75071 495 aa6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 XYLBO75191 536 aa6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 PPFIA2O75334 1257 aa6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 A1BGP04217 495 aa6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 RNASE9P60153 205 aaKnown RBP6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 ARF3P61204 181 aaPredicted RBP6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 ARF1P84077 181 aaKnown RBP6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 ARHGAP8P85298 464 aa6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 ACVR2BQ13705 512 aa6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 CIAPIN1Q6FI81 312 aa6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 CTR9Q6PD62 1173 aa6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 TRAT1Q6PIZ9 186 aa6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 TTC7BQ86TV6 843 aa6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 UNC45BQ8IWX7 931 aa6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 ADCY4Q8NFM4 1077 aa6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 CTNNBL1Q8WYA6 563 aaPredicted RBP6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 BSNDQ8WZ55 320 aa6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 SUSD3Q96L08 255 aa6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 DHRS1Q96LJ7 313 aa6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 KRT23Q9C075 422 aa6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 OXSMQ9NWU1 459 aa6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 DNAJC28Q9NX36 388 aa6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 IGSF9Q9P2J2 1179 aa6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 KLHL3Q9UH77 587 aa6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 LIMCH1Q9UPQ0 1083 aa6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 SNX8Q9Y5X2 465 aa6.83□□□□□ -1.32
TRAPPC11-209ENST00000512476 PLXNC1O60486 1568 aa6.82□□□□□ -1.32
TRAPPC11-209ENST00000512476 DENND4BO75064 1496 aaPredicted RBP6.82□□□□□ -1.32
TRAPPC11-209ENST00000512476 ANKRD50Q9ULJ7 1429 aa6.82□□□□□ -1.32
TRAPPC11-209ENST00000512476 TRAPPC8Q9Y2L5 1435 aa6.82□□□□□ -1.32
TRAPPC11-209ENST00000512476 TMEM94Q12767 1356 aa6.82□□□□□ -1.32
TRAPPC11-209ENST00000512476 KIF15Q9NS87 1388 aa6.82□□□□□ -1.32
TRAPPC11-209ENST00000512476 MEN1O00255 615 aa6.82□□□□□ -1.32
TRAPPC11-209ENST00000512476 GPC3P51654 580 aa6.82□□□□□ -1.32
TRAPPC11-209ENST00000512476 GUCY1A3Q02108 690 aa6.82□□□□□ -1.32
TRAPPC11-209ENST00000512476 ARHGAP15Q53QZ3 475 aa6.82□□□□□ -1.32
TRAPPC11-209ENST00000512476 TPGS2Q68CL5 300 aa6.82□□□□□ -1.32
TRAPPC11-209ENST00000512476 OLFML1Q6UWY5 402 aa6.82□□□□□ -1.32
TRAPPC11-209ENST00000512476 ADGRG6Q86SQ4 1221 aa6.82□□□□□ -1.32
TRAPPC11-209ENST00000512476 MYOCDQ8IZQ8 938 aa6.82□□□□□ -1.32
TRAPPC11-209ENST00000512476 PIGOQ8TEQ8 1089 aa6.82□□□□□ -1.32
TRAPPC11-209ENST00000512476 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.82□□□□□ -1.32
TRAPPC11-209ENST00000512476 APIPQ96GX9 242 aa6.82□□□□□ -1.32
TRAPPC11-209ENST00000512476 LENG8Q96PV6 779 aaPredicted RBP6.82□□□□□ -1.32
TRAPPC11-209ENST00000512476 PRAM1Q96QH2 718 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms