RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 EXTL3O43909 919 aa9.9□□□□□ -0.82
CPNE4-210ENST00000512332 HPDP32754 393 aaPredicted RBP9.9□□□□□ -0.82
CPNE4-210ENST00000512332 COPB2P35606 906 aa9.9□□□□□ -0.82
CPNE4-210ENST00000512332 SLC1A1P43005 524 aa9.9□□□□□ -0.82
CPNE4-210ENST00000512332 TGFB2P61812 414 aa9.9□□□□□ -0.82
CPNE4-210ENST00000512332 IFFO1Q0D2I5 559 aa9.9□□□□□ -0.82
CPNE4-210ENST00000512332 SKIDA1Q1XH10 827 aa9.9□□□□□ -0.82
CPNE4-210ENST00000512332 ODF2Q5BJF6 829 aa9.9□□□□□ -0.82
CPNE4-210ENST00000512332 TTC27Q6P3X3 843 aa9.9□□□□□ -0.82
CPNE4-210ENST00000512332 ABHD15Q6UXT9 468 aa9.9□□□□□ -0.82
CPNE4-210ENST00000512332 ADAT2Q7Z6V5 191 aaKnown RBP9.9□□□□□ -0.82
CPNE4-210ENST00000512332 SCYL3Q8IZE3 742 aa9.9□□□□□ -0.82
CPNE4-210ENST00000512332 MAIP1Q8WWC4 291 aa9.9□□□□□ -0.82
CPNE4-210ENST00000512332 PSPC1Q8WXF1 523 aaKnown RBP9.9□□□□□ -0.82
CPNE4-210ENST00000512332 ART4Q93070 314 aa9.9□□□□□ -0.82
CPNE4-210ENST00000512332 IFT74Q96LB3 600 aa9.9□□□□□ -0.82
CPNE4-210ENST00000512332 CENPHQ9H3R5 247 aa9.9□□□□□ -0.82
CPNE4-210ENST00000512332 ATP6V0A4Q9HBG4 840 aa9.9□□□□□ -0.82
CPNE4-210ENST00000512332 JPH1Q9HDC5 661 aaPredicted RBP9.9□□□□□ -0.82
CPNE4-210ENST00000512332 XPNPEP1Q9NQW7 623 aa9.9□□□□□ -0.82
CPNE4-210ENST00000512332 CYP26B1Q9NR63 512 aa9.9□□□□□ -0.82
CPNE4-210ENST00000512332 TMEM51Q9NW97 253 aa9.9□□□□□ -0.82
CPNE4-210ENST00000512332 SNX24Q9Y343 169 aa9.9□□□□□ -0.82
CPNE4-210ENST00000512332 PCDHB2Q9Y5E7 798 aa9.9□□□□□ -0.82
CPNE4-210ENST00000512332 SPATA31C2B4DYI2 1134 aa9.9□□□□□ -0.83
CPNE4-210ENST00000512332 C19orf81C9J6K1 198 aa9.9□□□□□ -0.83
CPNE4-210ENST00000512332 HNRNPDLO14979 420 aaKnown RBP9.9□□□□□ -0.83
CPNE4-210ENST00000512332 RGS20O76081 388 aa9.9□□□□□ -0.83
CPNE4-210ENST00000512332 RARAP10276 462 aa9.9□□□□□ -0.83
CPNE4-210ENST00000512332 RARGP13631 454 aa9.9□□□□□ -0.83
CPNE4-210ENST00000512332 DSG3P32926 999 aa9.9□□□□□ -0.83
CPNE4-210ENST00000512332 RPL21P46778 160 aaKnown RBP9.9□□□□□ -0.83
CPNE4-210ENST00000512332 MAGOHP61326 146 aaKnown RBP9.9□□□□□ -0.83
CPNE4-210ENST00000512332 PTP4A2Q12974 167 aa9.9□□□□□ -0.83
CPNE4-210ENST00000512332 DGKZQ13574 1117 aa9.9□□□□□ -0.83
CPNE4-210ENST00000512332 PSMD6Q15008 389 aa9.9□□□□□ -0.83
CPNE4-210ENST00000512332 XKR3Q5GH77 459 aa9.9□□□□□ -0.83
CPNE4-210ENST00000512332 DENND2CQ68D51 928 aa9.9□□□□□ -0.83
CPNE4-210ENST00000512332 SMYD5Q6GMV2 418 aa9.9□□□□□ -0.83
CPNE4-210ENST00000512332 SWSAP1Q6NVH7 229 aa9.9□□□□□ -0.83
CPNE4-210ENST00000512332 AADACL2Q6P093 401 aa9.9□□□□□ -0.83
CPNE4-210ENST00000512332 SYDE1Q6ZW31 735 aaPredicted RBP9.9□□□□□ -0.83
CPNE4-210ENST00000512332 ZNF280CQ8ND82 737 aa9.9□□□□□ -0.83
CPNE4-210ENST00000512332 TATDN2Q93075 761 aa9.9□□□□□ -0.83
CPNE4-210ENST00000512332 KIFC3Q9BVG8 833 aa9.9□□□□□ -0.83
CPNE4-210ENST00000512332 ACP6Q9NPH0 428 aa9.9□□□□□ -0.83
CPNE4-210ENST00000512332 SLC9A2Q9UBY0 812 aa9.9□□□□□ -0.83
CPNE4-210ENST00000512332 CNOT8Q9UFF9 292 aaKnown RBP9.9□□□□□ -0.83
CPNE4-210ENST00000512332 ZNF214Q9UL59 606 aaPredicted RBP9.9□□□□□ -0.83
CPNE4-210ENST00000512332 WDR81Q562E7 1941 aa9.89□□□□□ -0.83
CPNE4-210ENST00000512332 ADGRA3Q8IWK6 1321 aa9.89□□□□□ -0.83
CPNE4-210ENST00000512332 PASKQ96RG2 1323 aa9.89□□□□□ -0.83
CPNE4-210ENST00000512332 C5orf60A6NFR6 353 aa9.89□□□□□ -0.83
CPNE4-210ENST00000512332 TMEM110-MUSTN1A8MSY1 372 aa9.89□□□□□ -0.83
CPNE4-210ENST00000512332 PIGRP01833 764 aa9.89□□□□□ -0.83
CPNE4-210ENST00000512332 MAN1A1P33908 653 aa9.89□□□□□ -0.83
CPNE4-210ENST00000512332 SEC24CP53992 1094 aa9.89□□□□□ -0.83
CPNE4-210ENST00000512332 GNPTABQ3T906 1256 aa9.89□□□□□ -0.83
CPNE4-210ENST00000512332 ZACNQ401N2 412 aa9.89□□□□□ -0.83
CPNE4-210ENST00000512332 C6orf118Q5T5N4 469 aa9.89□□□□□ -0.83
CPNE4-210ENST00000512332 SNRNP48Q6IEG0 339 aaKnown RBP9.89□□□□□ -0.83
CPNE4-210ENST00000512332 PPP1R2P3Q6NXS1 205 aa9.89□□□□□ -0.83
CPNE4-210ENST00000512332 MIS18BP1Q6P0N0 1132 aa9.89□□□□□ -0.83
CPNE4-210ENST00000512332 C6orf89Q6UWU4 347 aa9.89□□□□□ -0.83
CPNE4-210ENST00000512332 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.89□□□□□ -0.83
CPNE4-210ENST00000512332 TAS1R3Q7RTX0 852 aa9.89□□□□□ -0.83
CPNE4-210ENST00000512332 MCOLN2Q8IZK6 566 aa9.89□□□□□ -0.83
CPNE4-210ENST00000512332 PDGFDQ9GZP0 370 aaPredicted RBP9.89□□□□□ -0.83
CPNE4-210ENST00000512332 TOPORSQ9NS56 1045 aaPredicted RBP9.89□□□□□ -0.83
CPNE4-210ENST00000512332 C1orf112Q9NSG2 853 aa9.89□□□□□ -0.83
CPNE4-210ENST00000512332 BCCIPQ9P287 314 aaKnown RBP eCLIP9.89□□□□□ -0.83
CPNE4-210ENST00000512332 RLFQ13129 1914 aa9.89□□□□□ -0.83
CPNE4-210ENST00000512332 E7EVH7 732 aa9.88□□□□□ -0.83
CPNE4-210ENST00000512332 ATMINO43313 823 aaPredicted RBP9.88□□□□□ -0.83
CPNE4-210ENST00000512332 KIAA0754O94854 1291 aa9.88□□□□□ -0.83
CPNE4-210ENST00000512332 ATG7O95352 703 aa9.88□□□□□ -0.83
CPNE4-210ENST00000512332 EGFRP00533 1210 aa9.88□□□□□ -0.83
CPNE4-210ENST00000512332 CYP1A1P04798 512 aaPredicted RBP9.88□□□□□ -0.83
CPNE4-210ENST00000512332 DLATP10515 647 aaKnown RBP9.88□□□□□ -0.83
CPNE4-210ENST00000512332 PTPRAP18433 802 aa9.88□□□□□ -0.83
CPNE4-210ENST00000512332 ACTR2P61160 394 aa9.88□□□□□ -0.83
CPNE4-210ENST00000512332 ADCY2Q08462 1091 aa9.88□□□□□ -0.83
CPNE4-210ENST00000512332 ZNF568Q3ZCX4 644 aa9.88□□□□□ -0.83
CPNE4-210ENST00000512332 TTC31Q49AM3 519 aaPredicted RBP9.88□□□□□ -0.83
CPNE4-210ENST00000512332 TNFAIP8L3Q5GJ75 292 aa9.88□□□□□ -0.83
CPNE4-210ENST00000512332 WDR44Q5JSH3 913 aa9.88□□□□□ -0.83
CPNE4-210ENST00000512332 SLFN12LQ6IEE8 588 aa9.88□□□□□ -0.83
CPNE4-210ENST00000512332 TRIM72Q6ZMU5 477 aa9.88□□□□□ -0.83
CPNE4-210ENST00000512332 CCDC105Q8IYK2 499 aa9.88□□□□□ -0.83
CPNE4-210ENST00000512332 RNF25Q96BH1 459 aaPredicted RBP9.88□□□□□ -0.83
CPNE4-210ENST00000512332 WNK4Q96J92 1243 aa9.88□□□□□ -0.83
CPNE4-210ENST00000512332 VCPIP1Q96JH7 1222 aa9.88□□□□□ -0.83
CPNE4-210ENST00000512332 RABEP2Q9H5N1 569 aa9.88□□□□□ -0.83
CPNE4-210ENST00000512332 CYP39A1Q9NYL5 469 aa9.88□□□□□ -0.83
CPNE4-210ENST00000512332 WHRNQ9P202 907 aa9.88□□□□□ -0.83
CPNE4-210ENST00000512332 MYPNQ86TC9 1320 aa9.88□□□□□ -0.83
CPNE4-210ENST00000512332 ANKRD65E5RJM6 399 aa9.88□□□□□ -0.83
CPNE4-210ENST00000512332 ECEL1O95672 775 aa9.88□□□□□ -0.83
CPNE4-210ENST00000512332 LDHAP00338 332 aaKnown RBP9.88□□□□□ -0.83
CPNE4-210ENST00000512332 AGTP01019 485 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms