RNA–Protein interactions for RNA: ENST00000512193.5

NEK1-208, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-208ENST00000512193 KLHL38Q2WGJ6 581 aa8.54□□□□□ -1.04
NEK1-208ENST00000512193 GRAMD1BQ3KR37 738 aa8.54□□□□□ -1.04
NEK1-208ENST00000512193 C1orf228Q6PIY5 440 aa8.54□□□□□ -1.04
NEK1-208ENST00000512193 CYP2W1Q8TAV3 490 aa8.54□□□□□ -1.04
NEK1-208ENST00000512193 FBXO25Q8TCJ0 367 aa8.54□□□□□ -1.04
NEK1-208ENST00000512193 KLF6Q99612 283 aaPredicted RBP8.54□□□□□ -1.04
NEK1-208ENST00000512193 MXRA8Q9BRK3 442 aa8.54□□□□□ -1.04
NEK1-208ENST00000512193 VPS11Q9H270 941 aa8.54□□□□□ -1.04
NEK1-208ENST00000512193 CCDC68Q9H2F9 335 aa8.54□□□□□ -1.04
NEK1-208ENST00000512193 SMYD3Q9H7B4 428 aa8.54□□□□□ -1.04
NEK1-208ENST00000512193 BLOC1S4Q9NUP1 217 aa8.54□□□□□ -1.04
NEK1-208ENST00000512193 FNDC3AQ9Y2H6 1198 aaKnown RBP8.54□□□□□ -1.04
NEK1-208ENST00000512193 PDE2AO00408 941 aaPredicted RBP8.54□□□□□ -1.04
NEK1-208ENST00000512193 EIF3DO15371 548 aaKnown RBP eCLIP8.54□□□□□ -1.04
NEK1-208ENST00000512193 MAP3K7O43318 606 aa8.54□□□□□ -1.04
NEK1-208ENST00000512193 ENTPD3O75355 529 aa8.54□□□□□ -1.04
NEK1-208ENST00000512193 DGAT1O75907 488 aa8.54□□□□□ -1.04
NEK1-208ENST00000512193 MYBL1P10243 752 aa8.54□□□□□ -1.04
NEK1-208ENST00000512193 ITGA4P13612 1032 aa8.54□□□□□ -1.04
NEK1-208ENST00000512193 EPHB1P54762 984 aa8.54□□□□□ -1.04
NEK1-208ENST00000512193 COG7P83436 770 aa8.54□□□□□ -1.04
NEK1-208ENST00000512193 NFX1Q12986 1120 aaKnown RBP8.54□□□□□ -1.04
NEK1-208ENST00000512193 DPY19L2Q6NUT2 758 aa8.54□□□□□ -1.04
NEK1-208ENST00000512193 KIF2BQ8N4N8 673 aa8.54□□□□□ -1.04
NEK1-208ENST00000512193 GLIS3Q8NEA6 775 aa8.54□□□□□ -1.04
NEK1-208ENST00000512193 CBWD1Q9BRT8 395 aa8.54□□□□□ -1.04
NEK1-208ENST00000512193 POLR3CQ9BUI4 534 aaPredicted RBP8.54□□□□□ -1.04
NEK1-208ENST00000512193 SLC5A4Q9NY91 659 aa8.54□□□□□ -1.04
NEK1-208ENST00000512193 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.54□□□□□ -1.04
NEK1-208ENST00000512193 ARL2BPQ9Y2Y0 163 aa8.54□□□□□ -1.04
NEK1-208ENST00000512193 USP15Q9Y4E8 981 aaPredicted RBP8.54□□□□□ -1.04
NEK1-208ENST00000512193 USH1CQ9Y6N9 552 aa8.54□□□□□ -1.04
NEK1-208ENST00000512193 CNTNAP4Q9C0A0 1308 aa8.54□□□□□ -1.04
NEK1-208ENST00000512193 LPXNO60711 386 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 HLA-DRAP01903 254 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 KRT3P12035 628 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 MAP7Q14244 749 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 TRMT10CQ7L0Y3 403 aaKnown RBP8.53□□□□□ -1.04
NEK1-208ENST00000512193 RBBP8NLQ8NC74 664 aaPredicted RBP8.53□□□□□ -1.04
NEK1-208ENST00000512193 ATG4AQ8WYN0 398 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 MRPL4Q9BYD3 311 aaKnown RBP8.53□□□□□ -1.04
NEK1-208ENST00000512193 TRIM4Q9C037 500 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 TMEM39BQ9GZU3 492 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 Q9H521 79 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 ACAD9Q9H845 621 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 SPC25Q9HBM1 224 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 CFAP73A6NFT4 308 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 POLRMTO00411 1230 aaKnown RBP8.53□□□□□ -1.04
NEK1-208ENST00000512193 SH3BP5O60239 455 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 TRPA1O75762 1119 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 ATP5HO75947 161 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 CIITAP33076 1130 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 SLC1A1P43005 524 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 CDR2Q01850 454 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 MAPK7Q13164 816 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 NCOA4Q13772 614 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 FOXR1Q6PIV2 292 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 SLC13A5Q86YT5 568 aaPredicted RBP8.53□□□□□ -1.04
NEK1-208ENST00000512193 CBWD2Q8IUF1 395 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 C18orf8Q96DM3 657 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 RIT2Q99578 217 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 TTC1Q99614 292 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 KLHL8Q9P2G9 620 aaPredicted RBP8.53□□□□□ -1.04
NEK1-208ENST00000512193 PCDHB2Q9Y5E7 798 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 SLC4A1P02730 911 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 ARP10275 920 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 ITGA8P53708 1063 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 RAD23BP54727 409 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 SEPT6Q14141 434 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 PRAMEF18Q5VWM3 479 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 TRPM8Q7Z2W7 1104 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 FAM167AQ96KS9 214 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 NUDCD1Q96RS6 583 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 TARS2Q9BW92 718 aaKnown RBP8.53□□□□□ -1.04
NEK1-208ENST00000512193 EHD4Q9H223 541 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 DHX35Q9H5Z1 703 aaKnown RBP8.53□□□□□ -1.04
NEK1-208ENST00000512193 SPATS2LQ9NUQ6 558 aaKnown RBP8.53□□□□□ -1.04
NEK1-208ENST00000512193 PRDM4Q9UKN5 801 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 NEU2Q9Y3R4 380 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 SPECC1L-ADORA2AF8WAN1 911 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 SGPL1O95470 568 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 HSPA4LO95757 839 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 FAM153BP0C7A2 387 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 RXRBP28702 533 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 COILP38432 576 aaPredicted RBP8.53□□□□□ -1.04
NEK1-208ENST00000512193 EIF3EP60228 445 aaKnown RBP8.53□□□□□ -1.04
NEK1-208ENST00000512193 RBBP5Q15291 538 aaKnown RBP8.53□□□□□ -1.04
NEK1-208ENST00000512193 FAM153CQ494X1 144 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 XKR3Q5GH77 459 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 JADE1Q6IE81 842 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 NUDCD3Q8IVD9 361 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 DDX27Q96GQ7 796 aaKnown RBP8.53□□□□□ -1.04
NEK1-208ENST00000512193 FAM161BQ96MY7 647 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 PABPC3Q9H361 631 aaKnown RBP8.53□□□□□ -1.04
NEK1-208ENST00000512193 KCND2Q9NZV8 630 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 PIM2Q9P1W9 311 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 STOML1Q9UBI4 398 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 FAM153AQ9UHL3 310 aa8.53□□□□□ -1.04
NEK1-208ENST00000512193 RALAP11233 206 aa8.52□□□□□ -1.05
NEK1-208ENST00000512193 HNRNPH1P31943 449 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms