RNA–Protein interactions for RNA: ENST00000511831.1

YIPF3-215, Transcript of Yip1 domain family member 3, human

TSL 4

Gene YIPF3, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
YIPF3-215	ENST00000511831	ZNF687	Q8N1G0	1237 aa		11.44	□□□□□ -0.58
YIPF3-215	ENST00000511831	TCP11	Q8WWU5	503 aa		11.44	□□□□□ -0.58
YIPF3-215	ENST00000511831	BORCS6	Q96GS4	357 aa		11.44	□□□□□ -0.58
YIPF3-215	ENST00000511831	JAKMIP1	Q96N16	626 aa	Known RBP	11.44	□□□□□ -0.58
YIPF3-215	ENST00000511831	SEMA4G	Q9NTN9	838 aa		11.44	□□□□□ -0.58
YIPF3-215	ENST00000511831	PCDHA4	Q9UN74	947 aa		11.44	□□□□□ -0.58
YIPF3-215	ENST00000511831	ARID2	Q68CP9	1835 aa		11.44	□□□□□ -0.58
YIPF3-215	ENST00000511831	FRY	Q5TBA9	3013 aa		11.44	□□□□□ -0.58
YIPF3-215	ENST00000511831		M0R2N6	131 aa		11.43	□□□□□ -0.58
YIPF3-215	ENST00000511831	PTGES	O14684	152 aa		11.43	□□□□□ -0.58
YIPF3-215	ENST00000511831	NCAM2	O15394	837 aa		11.43	□□□□□ -0.58
YIPF3-215	ENST00000511831	ASAP2	O43150	1006 aa		11.43	□□□□□ -0.58
YIPF3-215	ENST00000511831	DTNB	O60941	627 aa		11.43	□□□□□ -0.58
YIPF3-215	ENST00000511831	ECI2	O75521	394 aa		11.43	□□□□□ -0.58
YIPF3-215	ENST00000511831	RHO	P08100	348 aa		11.43	□□□□□ -0.58
YIPF3-215	ENST00000511831	IFNAR1	P17181	557 aa		11.43	□□□□□ -0.58
YIPF3-215	ENST00000511831	FCAR	P24071	287 aa		11.43	□□□□□ -0.58
YIPF3-215	ENST00000511831	HOXA9	P31269	272 aa		11.43	□□□□□ -0.58
YIPF3-215	ENST00000511831	SATB1	Q01826	763 aa		11.43	□□□□□ -0.58
YIPF3-215	ENST00000511831	TUSC3	Q13454	348 aa		11.43	□□□□□ -0.58
YIPF3-215	ENST00000511831	TSGA10IP	Q3SY00	556 aa		11.43	□□□□□ -0.58
YIPF3-215	ENST00000511831	PRR23C	Q6ZRP0	262 aa		11.43	□□□□□ -0.58
YIPF3-215	ENST00000511831	HACE1	Q8IYU2	909 aa		11.43	□□□□□ -0.58
YIPF3-215	ENST00000511831	TCEAL4	Q96EI5	215 aa		11.43	□□□□□ -0.58
YIPF3-215	ENST00000511831	YTHDC1	Q96MU7	727 aa	Known RBP	11.43	□□□□□ -0.58
YIPF3-215	ENST00000511831	CHRD	Q9H2X0	955 aa		11.43	□□□□□ -0.58
YIPF3-215	ENST00000511831	USP20	Q9Y2K6	914 aa		11.43	□□□□□ -0.58
YIPF3-215	ENST00000511831	BAHCC1	Q9P281	2608 aa		11.43	□□□□□ -0.58
YIPF3-215	ENST00000511831	VWA8	A3KMH1	1905 aa		11.43	□□□□□ -0.58
YIPF3-215	ENST00000511831		A0A087WWV3	80 aa		11.42	□□□□□ -0.58
YIPF3-215	ENST00000511831	TTLL13P	A6NNM8	815 aa		11.42	□□□□□ -0.58
YIPF3-215	ENST00000511831	CHURC1-FNTB	B4DL54	471 aa		11.42	□□□□□ -0.58
YIPF3-215	ENST00000511831		I3L4J1	428 aa		11.42	□□□□□ -0.58
YIPF3-215	ENST00000511831	DKC1	O60832	514 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
YIPF3-215	ENST00000511831	RET	P07949	1114 aa		11.42	□□□□□ -0.58
YIPF3-215	ENST00000511831	GLRA2	P23416	452 aa		11.42	□□□□□ -0.58
YIPF3-215	ENST00000511831	FNTB	P49356	437 aa		11.42	□□□□□ -0.58
YIPF3-215	ENST00000511831	NCBP1	Q09161	790 aa	Known RBP	11.42	□□□□□ -0.58
YIPF3-215	ENST00000511831	TFDP1	Q14186	410 aa		11.42	□□□□□ -0.58
YIPF3-215	ENST00000511831	SIM2	Q14190	667 aa	Predicted RBP	11.42	□□□□□ -0.58
YIPF3-215	ENST00000511831	GAS6	Q14393	721 aa		11.42	□□□□□ -0.58
YIPF3-215	ENST00000511831	KRT32	Q14532	448 aa		11.42	□□□□□ -0.58
YIPF3-215	ENST00000511831	CCDC6	Q16204	474 aa		11.42	□□□□□ -0.58
YIPF3-215	ENST00000511831	SLC27A1	Q6PCB7	646 aa		11.42	□□□□□ -0.58
YIPF3-215	ENST00000511831	MOXD1	Q6UVY6	613 aa		11.42	□□□□□ -0.58
YIPF3-215	ENST00000511831	C4orf19	Q8IY42	314 aa		11.42	□□□□□ -0.58
YIPF3-215	ENST00000511831	NELL2	Q99435	816 aa		11.42	□□□□□ -0.58
YIPF3-215	ENST00000511831	FAM126A	Q9BYI3	521 aa	Predicted RBP	11.42	□□□□□ -0.58
YIPF3-215	ENST00000511831	LMAN1L	Q9HAT1	526 aa		11.42	□□□□□ -0.58
YIPF3-215	ENST00000511831	KCNMB3	Q9NPA1	279 aa		11.42	□□□□□ -0.58
YIPF3-215	ENST00000511831	SH3GLB2	Q9NR46	395 aa		11.42	□□□□□ -0.58
YIPF3-215	ENST00000511831	SNTG2	Q9NY99	539 aa		11.42	□□□□□ -0.58
YIPF3-215	ENST00000511831	KCNH3	Q9ULD8	1083 aa		11.42	□□□□□ -0.58
YIPF3-215	ENST00000511831	KCNJ14	Q9UNX9	436 aa		11.42	□□□□□ -0.58
YIPF3-215	ENST00000511831	MRPS17	Q9Y2R5	130 aa	Known RBP	11.42	□□□□□ -0.58
YIPF3-215	ENST00000511831	CDY1	Q9Y6F8	540 aa		11.42	□□□□□ -0.58
YIPF3-215	ENST00000511831	F5	P12259	2224 aa		11.41	□□□□□ -0.58
YIPF3-215	ENST00000511831	NCAN	O14594	1321 aa		11.41	□□□□□ -0.58
YIPF3-215	ENST00000511831	COL4A2	P08572	1712 aa		11.41	□□□□□ -0.58
YIPF3-215	ENST00000511831	HR	O43593	1189 aa		11.41	□□□□□ -0.58
YIPF3-215	ENST00000511831	RECQL4	O94761	1208 aa		11.41	□□□□□ -0.58
YIPF3-215	ENST00000511831	HMGB1	P09429	215 aa	Known RBP	11.41	□□□□□ -0.58
YIPF3-215	ENST00000511831	PDIA3	P30101	505 aa	Known RBP	11.41	□□□□□ -0.58
YIPF3-215	ENST00000511831	COL9A2	Q14055	689 aa	Predicted RBP	11.41	□□□□□ -0.58
YIPF3-215	ENST00000511831	RAB33A	Q14088	237 aa		11.41	□□□□□ -0.58
YIPF3-215	ENST00000511831	MXD4	Q14582	209 aa	Predicted RBP	11.41	□□□□□ -0.58
YIPF3-215	ENST00000511831	EPHA7	Q15375	998 aa		11.41	□□□□□ -0.58
YIPF3-215	ENST00000511831	FAM78A	Q5JUQ0	283 aa		11.41	□□□□□ -0.58
YIPF3-215	ENST00000511831	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	11.41	□□□□□ -0.58
YIPF3-215	ENST00000511831	HEATR6	Q6AI08	1181 aa	Known RBP	11.41	□□□□□ -0.58
YIPF3-215	ENST00000511831	BLOC1S2	Q6QNY1	142 aa		11.41	□□□□□ -0.58
YIPF3-215	ENST00000511831	MAEA	Q7L5Y9	396 aa		11.41	□□□□□ -0.58
YIPF3-215	ENST00000511831	OTUD6A	Q7L8S5	288 aa		11.41	□□□□□ -0.58
YIPF3-215	ENST00000511831	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	11.41	□□□□□ -0.58
YIPF3-215	ENST00000511831	POTED	Q86YR6	584 aa		11.41	□□□□□ -0.58
YIPF3-215	ENST00000511831	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.41	□□□□□ -0.58
YIPF3-215	ENST00000511831	TPH2	Q8IWU9	490 aa		11.41	□□□□□ -0.58
YIPF3-215	ENST00000511831	EXOC8	Q8IYI6	725 aa		11.41	□□□□□ -0.58
YIPF3-215	ENST00000511831	CELF5	Q8N6W0	485 aa	Known RBP	11.41	□□□□□ -0.58
YIPF3-215	ENST00000511831	HAS1	Q92839	578 aa		11.41	□□□□□ -0.58
YIPF3-215	ENST00000511831	ELSPBP1	Q96BH3	223 aa		11.41	□□□□□ -0.58
YIPF3-215	ENST00000511831	LARP6	Q9BRS8	491 aa	Known RBP	11.41	□□□□□ -0.58
YIPF3-215	ENST00000511831	C22orf23	Q9BZE7	217 aa		11.41	□□□□□ -0.58
YIPF3-215	ENST00000511831	POLR3F	Q9H1D9	316 aa	Predicted RBP	11.41	□□□□□ -0.58
YIPF3-215	ENST00000511831	BRD9	Q9H8M2	597 aa		11.41	□□□□□ -0.58
YIPF3-215	ENST00000511831	GPRC5C	Q9NQ84	441 aa		11.41	□□□□□ -0.58
YIPF3-215	ENST00000511831	RBM12	Q9NTZ6	932 aa	Known RBP	11.41	□□□□□ -0.58
YIPF3-215	ENST00000511831	ANGPTL2	Q9UKU9	493 aa		11.41	□□□□□ -0.58
YIPF3-215	ENST00000511831	PPME1	Q9Y570	386 aa		11.41	□□□□□ -0.58
YIPF3-215	ENST00000511831		A0A1B0GUA9	196 aa		11.4	□□□□□ -0.58
YIPF3-215	ENST00000511831	POU2F2	P09086	479 aa		11.4	□□□□□ -0.58
YIPF3-215	ENST00000511831	HOXB3	P14651	431 aa	Predicted RBP	11.4	□□□□□ -0.58
YIPF3-215	ENST00000511831	RPS6KB1	P23443	525 aa		11.4	□□□□□ -0.58
YIPF3-215	ENST00000511831	TKT	P29401	623 aa	Known RBP	11.4	□□□□□ -0.58
YIPF3-215	ENST00000511831	GDI1	P31150	447 aa		11.4	□□□□□ -0.58
YIPF3-215	ENST00000511831	ARL2	P36404	184 aa		11.4	□□□□□ -0.58
YIPF3-215	ENST00000511831	CCR2	P41597	374 aa		11.4	□□□□□ -0.58
YIPF3-215	ENST00000511831	CCR3	P51677	355 aa		11.4	□□□□□ -0.58
YIPF3-215	ENST00000511831	NRL	P54845	237 aa		11.4	□□□□□ -0.58
YIPF3-215	ENST00000511831	SSRP1	Q08945	709 aa	Known RBP	11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms