RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 RRP12Q5JTH9 1297 aaKnown RBP7.07□□□□□ -1.28
NUP54-209ENST00000510569 ABHD17BQ5VST6 288 aa7.07□□□□□ -1.28
NUP54-209ENST00000510569 CMIPQ8IY22 773 aa7.07□□□□□ -1.28
NUP54-209ENST00000510569 DRC7Q8IY82 874 aa7.07□□□□□ -1.28
NUP54-209ENST00000510569 TGFBRAP1Q8WUH2 860 aa7.07□□□□□ -1.28
NUP54-209ENST00000510569 CHAC2Q8WUX2 184 aa7.07□□□□□ -1.28
NUP54-209ENST00000510569 RIOX1Q9H6W3 641 aa7.07□□□□□ -1.28
NUP54-209ENST00000510569 PNPLA7Q6ZV29 1317 aa7.06□□□□□ -1.28
NUP54-209ENST00000510569 UNC119BA6NIH7 251 aa7.06□□□□□ -1.28
NUP54-209ENST00000510569 SEC24CP53992 1094 aa7.06□□□□□ -1.28
NUP54-209ENST00000510569 PPP3CAQ08209 521 aa7.06□□□□□ -1.28
NUP54-209ENST00000510569 CMTR2Q8IYT2 770 aaKnown RBP7.06□□□□□ -1.28
NUP54-209ENST00000510569 OR56A1Q8NGH5 318 aa7.06□□□□□ -1.28
NUP54-209ENST00000510569 ASB10Q8WXI3 467 aa7.06□□□□□ -1.28
NUP54-209ENST00000510569 ZNF764Q96H86 408 aaPredicted RBP7.06□□□□□ -1.28
NUP54-209ENST00000510569 ACE2Q9BYF1 805 aaPredicted RBP7.06□□□□□ -1.28
NUP54-209ENST00000510569 SLKQ9H2G2 1235 aaPredicted RBP7.06□□□□□ -1.28
NUP54-209ENST00000510569 VTA1Q9NP79 307 aa7.06□□□□□ -1.28
NUP54-209ENST00000510569 RBM12Q9NTZ6 932 aaKnown RBP7.06□□□□□ -1.28
NUP54-209ENST00000510569 KLHL11Q9NVR0 708 aa7.06□□□□□ -1.28
NUP54-209ENST00000510569 FAM30AQ9NZY2 134 aa7.06□□□□□ -1.28
NUP54-209ENST00000510569 ATP11BQ9Y2G3 1177 aa7.06□□□□□ -1.28
NUP54-209ENST00000510569 GOLGA8AA7E2F4 631 aa7.05□□□□□ -1.28
NUP54-209ENST00000510569 EGR2P11161 476 aaPredicted RBP7.05□□□□□ -1.28
NUP54-209ENST00000510569 CLK3P49761 638 aaKnown RBP7.05□□□□□ -1.28
NUP54-209ENST00000510569 CCT2P78371 535 aaKnown RBP7.05□□□□□ -1.28
NUP54-209ENST00000510569 MXRA7P84157 204 aa7.05□□□□□ -1.28
NUP54-209ENST00000510569 FAPQ12884 760 aa7.05□□□□□ -1.28
NUP54-209ENST00000510569 RESTQ13127 1097 aa7.05□□□□□ -1.28
NUP54-209ENST00000510569 STAT4Q14765 748 aa7.05□□□□□ -1.28
NUP54-209ENST00000510569 MUM1L1Q5H9M0 696 aa7.05□□□□□ -1.28
NUP54-209ENST00000510569 AFMIDQ63HM1 303 aa7.05□□□□□ -1.28
NUP54-209ENST00000510569 FAM180AQ6UWF9 173 aa7.05□□□□□ -1.28
NUP54-209ENST00000510569 FUBP1Q96AE4 644 aaKnown RBP7.05□□□□□ -1.28
NUP54-209ENST00000510569 VOPP1Q96AW1 172 aa7.05□□□□□ -1.28
NUP54-209ENST00000510569 BBC3Q96PG8 261 aaPredicted RBP7.05□□□□□ -1.28
NUP54-209ENST00000510569 MAP3K2Q9Y2U5 619 aa7.05□□□□□ -1.28
NUP54-209ENST00000510569 CDKL5O76039 1030 aa7.04□□□□□ -1.28
NUP54-209ENST00000510569 EYA4O95677 639 aa7.04□□□□□ -1.28
NUP54-209ENST00000510569 IL2RBP14784 551 aa7.04□□□□□ -1.28
NUP54-209ENST00000510569 MASP1P48740 699 aa7.04□□□□□ -1.28
NUP54-209ENST00000510569 KRTAP1-1Q07627 177 aa7.04□□□□□ -1.28
NUP54-209ENST00000510569 SCAPQ12770 1279 aa7.04□□□□□ -1.28
NUP54-209ENST00000510569 FOXI1Q12951 378 aa7.04□□□□□ -1.28
NUP54-209ENST00000510569 MALLQ13021 153 aa7.04□□□□□ -1.28
NUP54-209ENST00000510569 ADGRG3Q86Y34 549 aa7.04□□□□□ -1.28
NUP54-209ENST00000510569 MAPKAPK5Q8IW41 473 aa7.04□□□□□ -1.28
NUP54-209ENST00000510569 PQLC1Q8N2U9 271 aa7.04□□□□□ -1.28
NUP54-209ENST00000510569 FUBP3Q96I24 572 aaKnown RBP eCLIP7.04□□□□□ -1.28
NUP54-209ENST00000510569 PRDM13Q9H4Q3 707 aa7.04□□□□□ -1.28
NUP54-209ENST00000510569 LANCL2Q9NS86 450 aa7.04□□□□□ -1.28
NUP54-209ENST00000510569 MOCS1Q9NZB8 636 aa7.04□□□□□ -1.28
NUP54-209ENST00000510569 KIAA0355O15063 1070 aa7.03□□□□□ -1.28
NUP54-209ENST00000510569 ELANEP08246 267 aa7.03□□□□□ -1.28
NUP54-209ENST00000510569 MCAMP43121 646 aa7.03□□□□□ -1.28
NUP54-209ENST00000510569 SCAND1P57086 179 aa7.03□□□□□ -1.28
NUP54-209ENST00000510569 SRSF2Q01130 221 aaKnown RBP7.03□□□□□ -1.28
NUP54-209ENST00000510569 TOR2AQ5JU69 321 aa7.03□□□□□ -1.28
NUP54-209ENST00000510569 OTUD7BQ6GQQ9 843 aa7.03□□□□□ -1.28
NUP54-209ENST00000510569 FBXO18Q8NFZ0 1043 aa7.03□□□□□ -1.28
NUP54-209ENST00000510569 NTN5Q8WTR8 489 aaPredicted RBP7.03□□□□□ -1.28
NUP54-209ENST00000510569 CASKIN2Q8WXE0 1202 aa7.03□□□□□ -1.28
NUP54-209ENST00000510569 UHRF1Q96T88 793 aaPredicted RBP7.03□□□□□ -1.28
NUP54-209ENST00000510569 MRI1Q9BV20 369 aa7.03□□□□□ -1.28
NUP54-209ENST00000510569 DMRT3Q9NQL9 472 aa7.03□□□□□ -1.28
NUP54-209ENST00000510569 TMA7Q9Y2S6 64 aaKnown RBP7.03□□□□□ -1.28
NUP54-209ENST00000510569 ARHGEF17Q96PE2 2063 aaPredicted RBP7.03□□□□□ -1.28
NUP54-209ENST00000510569 ENDOD1O94919 500 aa7.02□□□□□ -1.29
NUP54-209ENST00000510569 VIL1P09327 827 aaKnown RBP7.02□□□□□ -1.29
NUP54-209ENST00000510569 GPR3P46089 330 aa7.02□□□□□ -1.29
NUP54-209ENST00000510569 MTNR1BP49286 362 aa7.02□□□□□ -1.29
NUP54-209ENST00000510569 RAP2BP61225 183 aa7.02□□□□□ -1.29
NUP54-209ENST00000510569 TMPRSS15P98073 1019 aa7.02□□□□□ -1.29
NUP54-209ENST00000510569 MGAT2Q10469 447 aa7.02□□□□□ -1.29
NUP54-209ENST00000510569 PRR16Q569H4 304 aa7.02□□□□□ -1.29
NUP54-209ENST00000510569 STRIP1Q5VSL9 837 aa7.02□□□□□ -1.29
NUP54-209ENST00000510569 B3GNTL1Q67FW5 361 aaPredicted RBP7.02□□□□□ -1.29
NUP54-209ENST00000510569 SDE2Q6IQ49 451 aa7.02□□□□□ -1.29
NUP54-209ENST00000510569 MED25Q71SY5 747 aa7.02□□□□□ -1.29
NUP54-209ENST00000510569 TMEM132CQ8N3T6 1108 aa7.02□□□□□ -1.29
NUP54-209ENST00000510569 CAVIN3Q969G5 261 aa7.02□□□□□ -1.29
NUP54-209ENST00000510569 PHACTR3Q96KR7 559 aa7.02□□□□□ -1.29
NUP54-209ENST00000510569 CCM2LQ9NUG4 571 aaPredicted RBP7.02□□□□□ -1.29
NUP54-209ENST00000510569 C14orf119Q9NWQ9 140 aa7.02□□□□□ -1.29
NUP54-209ENST00000510569 MAST3O60307 1309 aa7.01□□□□□ -1.29
NUP54-209ENST00000510569 ESRRBO95718 433 aa7.01□□□□□ -1.29
NUP54-209ENST00000510569 FOSP01100 380 aaPredicted RBP7.01□□□□□ -1.29
NUP54-209ENST00000510569 ATP5JP18859 108 aa7.01□□□□□ -1.29
NUP54-209ENST00000510569 GCSHP23434 173 aa7.01□□□□□ -1.29
NUP54-209ENST00000510569 ALDH1A3P47895 512 aa7.01□□□□□ -1.29
NUP54-209ENST00000510569 SLC5A3P53794 718 aa7.01□□□□□ -1.29
NUP54-209ENST00000510569 OCA2Q04671 838 aa7.01□□□□□ -1.29
NUP54-209ENST00000510569 CCDC142Q17RM4 750 aa7.01□□□□□ -1.29
NUP54-209ENST00000510569 GIMAP6Q6P9H5 292 aa7.01□□□□□ -1.29
NUP54-209ENST00000510569 REXO4Q9GZR2 422 aaKnown RBP7.01□□□□□ -1.29
NUP54-209ENST00000510569 ALG13Q9NP73 1137 aaKnown RBP7.01□□□□□ -1.29
NUP54-209ENST00000510569 TMEM74BQ9NUR3 256 aa7.01□□□□□ -1.29
NUP54-209ENST00000510569 PTGFRNQ9P2B2 879 aa7.01□□□□□ -1.29
NUP54-209ENST00000510569 SIK3Q9Y2K2 1263 aa7.01□□□□□ -1.29
NUP54-209ENST00000510569 A0A1B0GTW7 788 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms