RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 STRN3Q13033 797 aa25.19■■□□□ 1.62
SNF8-209ENST00000510558 RESTQ13127 1097 aa25.19■■□□□ 1.62
SNF8-209ENST00000510558 MPZL3Q6UWV2 235 aa25.19■■□□□ 1.62
SNF8-209ENST00000510558 GPBP1Q86WP2 473 aa25.19■■□□□ 1.62
SNF8-209ENST00000510558 TCHPQ9BT92 498 aa25.19■■□□□ 1.62
SNF8-209ENST00000510558 TOPORSQ9NS56 1045 aaPredicted RBP25.19■■□□□ 1.62
SNF8-209ENST00000510558 BLOC1S4Q9NUP1 217 aa25.19■■□□□ 1.62
SNF8-209ENST00000510558 FNIP2Q9P278 1114 aa25.19■■□□□ 1.62
SNF8-209ENST00000510558 CLIC4Q9Y696 253 aa25.19■■□□□ 1.62
SNF8-209ENST00000510558 MYO10Q9HD67 2058 aa25.19■■□□□ 1.62
SNF8-209ENST00000510558 C2CD4DB7Z1M9 353 aa25.18■■□□□ 1.62
SNF8-209ENST00000510558 K7ELQ4 463 aaPredicted RBP25.18■■□□□ 1.62
SNF8-209ENST00000510558 ABLIM1O14639 778 aa25.18■■□□□ 1.62
SNF8-209ENST00000510558 MAPTP10636 758 aaKnown RBP25.18■■□□□ 1.62
SNF8-209ENST00000510558 CREMQ03060 361 aa25.18■■□□□ 1.62
SNF8-209ENST00000510558 KARSQ15046 597 aaKnown RBP25.18■■□□□ 1.62
SNF8-209ENST00000510558 RTP2Q5QGT7 225 aa25.18■■□□□ 1.62
SNF8-209ENST00000510558 RASSF8Q8NHQ8 419 aa25.18■■□□□ 1.62
SNF8-209ENST00000510558 FOXD4L1Q9NU39 408 aa25.18■■□□□ 1.62
SNF8-209ENST00000510558 LARSQ9P2J5 1176 aaKnown RBP25.18■■□□□ 1.62
SNF8-209ENST00000510558 DPP7Q9UHL4 492 aa25.18■■□□□ 1.62
SNF8-209ENST00000510558 ODF2LQ9ULJ1 636 aa25.18■■□□□ 1.62
SNF8-209ENST00000510558 PDCD11Q14690 1871 aaKnown RBP25.17■■□□□ 1.62
SNF8-209ENST00000510558 BRD1O95696 1058 aa25.17■■□□□ 1.62
SNF8-209ENST00000510558 DHX8Q14562 1220 aaKnown RBP25.17■■□□□ 1.62
SNF8-209ENST00000510558 PTPAQ15257 358 aa25.17■■□□□ 1.62
SNF8-209ENST00000510558 PTPN21Q16825 1174 aa25.17■■□□□ 1.62
SNF8-209ENST00000510558 FAM171A1Q5VUB5 890 aa25.17■■□□□ 1.62
SNF8-209ENST00000510558 ELMSAN1Q6PJG2 1045 aa25.17■■□□□ 1.62
SNF8-209ENST00000510558 PRSS55Q6UWB4 352 aaPredicted RBP25.17■■□□□ 1.62
SNF8-209ENST00000510558 C15orf39Q6ZRI6 1047 aa25.17■■□□□ 1.62
SNF8-209ENST00000510558 PALB2Q86YC2 1186 aa25.17■■□□□ 1.62
SNF8-209ENST00000510558 GLYCTKQ8IVS8 523 aa25.17■■□□□ 1.62
SNF8-209ENST00000510558 CMASQ8NFW8 434 aaPredicted RBP25.17■■□□□ 1.62
SNF8-209ENST00000510558 ZBTB45Q96K62 511 aaPredicted RBP25.17■■□□□ 1.62
SNF8-209ENST00000510558 REEP2Q9BRK0 252 aa25.17■■□□□ 1.62
SNF8-209ENST00000510558 TTPALQ9BTX7 342 aa25.17■■□□□ 1.62
SNF8-209ENST00000510558 SMIM28A0A1B0GU29 152 aa25.16■■□□□ 1.62
SNF8-209ENST00000510558 TMEM189-UBE2V1I3L0A0 370 aa25.16■■□□□ 1.62
SNF8-209ENST00000510558 MYBP10242 640 aa25.16■■□□□ 1.62
SNF8-209ENST00000510558 HARSP12081 509 aaKnown RBP25.16■■□□□ 1.62
SNF8-209ENST00000510558 RPL17P18621 184 aaKnown RBP25.16■■□□□ 1.62
SNF8-209ENST00000510558 NCKAP1LP55160 1127 aa25.16■■□□□ 1.62
SNF8-209ENST00000510558 ELAVL2Q12926 359 aaKnown RBP25.16■■□□□ 1.62
SNF8-209ENST00000510558 MCM6Q14566 821 aa25.16■■□□□ 1.62
SNF8-209ENST00000510558 XKR4Q5GH76 650 aa25.16■■□□□ 1.62
SNF8-209ENST00000510558 FAM173BQ6P4H8 233 aa25.16■■□□□ 1.62
SNF8-209ENST00000510558 ALKAL1Q6UXT8 129 aa25.16■■□□□ 1.62
SNF8-209ENST00000510558 TRIM67Q6ZTA4 783 aa25.16■■□□□ 1.62
SNF8-209ENST00000510558 HFE2Q6ZVN8 426 aa25.16■■□□□ 1.62
SNF8-209ENST00000510558 CEP57Q86XR8 500 aa25.16■■□□□ 1.62
SNF8-209ENST00000510558 TDRD5Q8NAT2 981 aaKnown RBP25.16■■□□□ 1.62
SNF8-209ENST00000510558 RAD54LQ92698 747 aa25.16■■□□□ 1.62
SNF8-209ENST00000510558 SNX27Q96L92 541 aa25.16■■□□□ 1.62
SNF8-209ENST00000510558 UROC1Q96N76 676 aa25.16■■□□□ 1.62
SNF8-209ENST00000510558 CCSER1Q9C0I3 900 aa25.16■■□□□ 1.62
SNF8-209ENST00000510558 GOLGA2P5Q9HBQ8 144 aa25.16■■□□□ 1.62
SNF8-209ENST00000510558 ANKFY1Q9P2R3 1169 aa25.16■■□□□ 1.62
SNF8-209ENST00000510558 H0YCG3 227 aa25.15■■□□□ 1.62
SNF8-209ENST00000510558 TOM1L1O75674 476 aa25.15■■□□□ 1.62
SNF8-209ENST00000510558 C1RP00736 705 aa25.15■■□□□ 1.62
SNF8-209ENST00000510558 SPATA31D3P0C874 917 aa25.15■■□□□ 1.62
SNF8-209ENST00000510558 MARCKSP29966 332 aaPredicted RBP25.15■■□□□ 1.62
SNF8-209ENST00000510558 NOLC1Q14978 699 aaKnown RBP eCLIP25.15■■□□□ 1.62
SNF8-209ENST00000510558 ZPBP2Q6X784 338 aa25.15■■□□□ 1.62
SNF8-209ENST00000510558 SPATA31D4Q6ZUB0 917 aa25.15■■□□□ 1.62
SNF8-209ENST00000510558 CCDC149Q6ZUS6 474 aa25.15■■□□□ 1.62
SNF8-209ENST00000510558 HDAC7Q8WUI4 952 aa25.15■■□□□ 1.62
SNF8-209ENST00000510558 PIK3R5Q8WYR1 880 aa25.15■■□□□ 1.62
SNF8-209ENST00000510558 ACAP3Q96P50 834 aa25.15■■□□□ 1.62
SNF8-209ENST00000510558 MTMR6Q9Y217 621 aa25.15■■□□□ 1.62
SNF8-209ENST00000510558 USTQ9Y2C2 406 aa25.15■■□□□ 1.62
SNF8-209ENST00000510558 MYH15Q9Y2K3 1946 aa25.14■■□□□ 1.62
SNF8-209ENST00000510558 CCDC195A0A1B0GUA6 201 aa25.14■■□□□ 1.62
SNF8-209ENST00000510558 TGM5O43548 720 aa25.14■■□□□ 1.62
SNF8-209ENST00000510558 B3GAT3O94766 335 aa25.14■■□□□ 1.62
SNF8-209ENST00000510558 FAM13AO94988 1023 aa25.14■■□□□ 1.62
SNF8-209ENST00000510558 CLCNKBP51801 687 aa25.14■■□□□ 1.62
SNF8-209ENST00000510558 HAUS6Q7Z4H7 955 aa25.14■■□□□ 1.62
SNF8-209ENST00000510558 LARP4BQ92615 738 aaKnown RBP25.14■■□□□ 1.62
SNF8-209ENST00000510558 PLEKHA4Q9H4M7 779 aa25.14■■□□□ 1.62
SNF8-209ENST00000510558 FBXO2Q9UK22 296 aaPredicted RBP25.14■■□□□ 1.62
SNF8-209ENST00000510558 TRIOO75962 3097 aa25.14■■□□□ 1.61
SNF8-209ENST00000510558 TMEM221A6NGB7 291 aa25.13■■□□□ 1.61
SNF8-209ENST00000510558 M0R296 226 aa25.13■■□□□ 1.61
SNF8-209ENST00000510558 RFPL2O75678 378 aa25.13■■□□□ 1.61
SNF8-209ENST00000510558 IGFBP6P24592 240 aaPredicted RBP25.13■■□□□ 1.61
SNF8-209ENST00000510558 SOX4Q06945 474 aaPredicted RBP25.13■■□□□ 1.61
SNF8-209ENST00000510558 PSMD5Q16401 504 aa25.13■■□□□ 1.61
SNF8-209ENST00000510558 UPP1Q16831 310 aa25.13■■□□□ 1.61
SNF8-209ENST00000510558 SPECC1Q5M775 1068 aa25.13■■□□□ 1.61
SNF8-209ENST00000510558 LILRA6Q6PI73 481 aa25.13■■□□□ 1.61
SNF8-209ENST00000510558 DCLRE1AQ6PJP8 1040 aa25.13■■□□□ 1.61
SNF8-209ENST00000510558 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.13■■□□□ 1.61
SNF8-209ENST00000510558 USP49Q70CQ1 688 aa25.13■■□□□ 1.61
SNF8-209ENST00000510558 ZDHHC14Q8IZN3 488 aa25.13■■□□□ 1.61
SNF8-209ENST00000510558 LNX1Q8TBB1 728 aaPredicted RBP25.13■■□□□ 1.61
SNF8-209ENST00000510558 KCNN1Q92952 543 aa25.13■■□□□ 1.61
SNF8-209ENST00000510558 EPSTI1Q96J88 318 aa25.13■■□□□ 1.61
SNF8-209ENST00000510558 ZMAT2Q96NC0 199 aaKnown RBP25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms