RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 OTOP1Q7RTM1 612 aa5.82□□□□□ -1.48
NEK1-204ENST00000509912 LMBR1Q8WVP7 490 aa5.82□□□□□ -1.48
NEK1-204ENST00000509912 SCARF2Q96GP6 870 aaPredicted RBP5.82□□□□□ -1.48
NEK1-204ENST00000509912 SUCLG2Q96I99 432 aa5.82□□□□□ -1.48
NEK1-204ENST00000509912 AFG3L2Q9Y4W6 797 aa5.82□□□□□ -1.48
NEK1-204ENST00000509912 MRFAP1Q9Y605 127 aa5.82□□□□□ -1.48
NEK1-204ENST00000509912 MROH7-TTC4A0A0A0MT08 1334 aa5.82□□□□□ -1.48
NEK1-204ENST00000509912 NAV1Q8NEY1 1877 aa5.82□□□□□ -1.48
NEK1-204ENST00000509912 LRRC37A2A6NM11 1700 aa5.82□□□□□ -1.48
NEK1-204ENST00000509912 TMEM82A0PJX8 343 aa5.82□□□□□ -1.48
NEK1-204ENST00000509912 ATP2A1O14983 1001 aa5.82□□□□□ -1.48
NEK1-204ENST00000509912 VSIG8P0DPA2 414 aa5.82□□□□□ -1.48
NEK1-204ENST00000509912 TRIM27P14373 513 aa5.82□□□□□ -1.48
NEK1-204ENST00000509912 PAMP19021 973 aa5.82□□□□□ -1.48
NEK1-204ENST00000509912 C5AR1P21730 350 aa5.82□□□□□ -1.48
NEK1-204ENST00000509912 KLRK1P26718 216 aa5.82□□□□□ -1.48
NEK1-204ENST00000509912 C1orf228Q6PIY5 440 aa5.82□□□□□ -1.48
NEK1-204ENST00000509912 LDHAL6AQ6ZMR3 332 aa5.82□□□□□ -1.48
NEK1-204ENST00000509912 G2E3Q7L622 706 aa5.82□□□□□ -1.48
NEK1-204ENST00000509912 AMOTL1Q8IY63 956 aa5.82□□□□□ -1.48
NEK1-204ENST00000509912 SCYL3Q8IZE3 742 aa5.82□□□□□ -1.48
NEK1-204ENST00000509912 NAA15Q9BXJ9 866 aaKnown RBP5.82□□□□□ -1.48
NEK1-204ENST00000509912 R3HDMLQ9H3Y0 253 aa5.82□□□□□ -1.48
NEK1-204ENST00000509912 AS3MTQ9HBK9 375 aa5.82□□□□□ -1.48
NEK1-204ENST00000509912 TMOD2Q9NZR1 351 aa5.82□□□□□ -1.48
NEK1-204ENST00000509912 KLHL33A6NCF5 533 aa5.82□□□□□ -1.48
NEK1-204ENST00000509912 IFRD1O00458 451 aaPredicted RBP5.82□□□□□ -1.48
NEK1-204ENST00000509912 PCP11498 1178 aaKnown RBP5.82□□□□□ -1.48
NEK1-204ENST00000509912 SMAD3P84022 425 aaKnown RBP5.82□□□□□ -1.48
NEK1-204ENST00000509912 SMAD2Q15796 467 aaKnown RBP5.82□□□□□ -1.48
NEK1-204ENST00000509912 EEF1DP3Q658K8 133 aa5.82□□□□□ -1.48
NEK1-204ENST00000509912 CCDC149Q6ZUS6 474 aa5.82□□□□□ -1.48
NEK1-204ENST00000509912 NBPF11Q86T75 865 aa5.82□□□□□ -1.48
NEK1-204ENST00000509912 UBE2FQ969M7 185 aa5.82□□□□□ -1.48
NEK1-204ENST00000509912 SMC4Q9NTJ3 1288 aa5.82□□□□□ -1.48
NEK1-204ENST00000509912 SWAP70Q9UH65 585 aa5.82□□□□□ -1.48
NEK1-204ENST00000509912 PCDHGB3Q9Y5G1 929 aa5.82□□□□□ -1.48
NEK1-204ENST00000509912 CNTNAP5Q8WYK1 1306 aa5.81□□□□□ -1.48
NEK1-204ENST00000509912 FAM47E-STBD1D6RA91 191 aa5.81□□□□□ -1.48
NEK1-204ENST00000509912 IGF2BP3O00425 579 aaKnown RBP eCLIP5.81□□□□□ -1.48
NEK1-204ENST00000509912 EIF3JO75822 258 aaKnown RBP5.81□□□□□ -1.48
NEK1-204ENST00000509912 GSNP06396 782 aa5.81□□□□□ -1.48
NEK1-204ENST00000509912 TPP2P29144 1249 aaPredicted RBP5.81□□□□□ -1.48
NEK1-204ENST00000509912 NKPD1Q17RQ9 610 aa5.81□□□□□ -1.48
NEK1-204ENST00000509912 LCE2AQ5TA79 106 aaPredicted RBP5.81□□□□□ -1.48
NEK1-204ENST00000509912 MAP3K21Q5TCX8 1036 aa5.81□□□□□ -1.48
NEK1-204ENST00000509912 OLFML2BQ68BL8 750 aa5.81□□□□□ -1.48
NEK1-204ENST00000509912 DTWD1Q8N5C7 304 aa5.81□□□□□ -1.48
NEK1-204ENST00000509912 MB21D1Q8N884 522 aa5.81□□□□□ -1.48
NEK1-204ENST00000509912 CD99L2Q8TCZ2 262 aa5.81□□□□□ -1.48
NEK1-204ENST00000509912 WFDC12Q8WWY7 111 aa5.81□□□□□ -1.48
NEK1-204ENST00000509912 EAF2Q96CJ1 260 aaPredicted RBP5.81□□□□□ -1.48
NEK1-204ENST00000509912 CLMNQ96JQ2 1002 aa5.81□□□□□ -1.48
NEK1-204ENST00000509912 HSPA12BQ96MM6 686 aa5.81□□□□□ -1.48
NEK1-204ENST00000509912 PARK7Q99497 189 aaKnown RBP5.81□□□□□ -1.48
NEK1-204ENST00000509912 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.81□□□□□ -1.48
NEK1-204ENST00000509912 VEZTQ9HBM0 779 aa5.81□□□□□ -1.48
NEK1-204ENST00000509912 LRRC4CQ9HCJ2 640 aa5.81□□□□□ -1.48
NEK1-204ENST00000509912 EBF1Q9UH73 591 aa5.81□□□□□ -1.48
NEK1-204ENST00000509912 RCAN3Q9UKA8 241 aa5.81□□□□□ -1.48
NEK1-204ENST00000509912 RNF112Q9ULX5 631 aa5.81□□□□□ -1.48
NEK1-204ENST00000509912 PHTF1Q9UMS5 762 aa5.81□□□□□ -1.48
NEK1-204ENST00000509912 ADAMTS5Q9UNA0 930 aa5.81□□□□□ -1.48
NEK1-204ENST00000509912 RLFQ13129 1914 aa5.81□□□□□ -1.48
NEK1-204ENST00000509912 PCNTO95613 3336 aa5.81□□□□□ -1.48
NEK1-204ENST00000509912 CLRN2A0PK11 232 aa5.81□□□□□ -1.48
NEK1-204ENST00000509912 NRDCO43847 1150 aa5.81□□□□□ -1.48
NEK1-204ENST00000509912 FUCA1P04066 466 aa5.81□□□□□ -1.48
NEK1-204ENST00000509912 SLURP2P0DP57 97 aa5.81□□□□□ -1.48
NEK1-204ENST00000509912 COL8A1P27658 744 aa5.81□□□□□ -1.48
NEK1-204ENST00000509912 CDK17Q00537 523 aa5.81□□□□□ -1.48
NEK1-204ENST00000509912 STK3Q13188 491 aa5.81□□□□□ -1.48
NEK1-204ENST00000509912 CRY1Q16526 586 aa5.81□□□□□ -1.48
NEK1-204ENST00000509912 SBK1Q52WX2 424 aa5.81□□□□□ -1.48
NEK1-204ENST00000509912 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.81□□□□□ -1.48
NEK1-204ENST00000509912 TMEM52Q8NDY8 209 aa5.81□□□□□ -1.48
NEK1-204ENST00000509912 TMEM169Q96HH4 297 aa5.81□□□□□ -1.48
NEK1-204ENST00000509912 BOCQ9BWV1 1114 aa5.81□□□□□ -1.48
NEK1-204ENST00000509912 ZMAT4Q9H898 229 aa5.81□□□□□ -1.48
NEK1-204ENST00000509912 ATP13A1Q9HD20 1204 aa5.81□□□□□ -1.48
NEK1-204ENST00000509912 CDC23Q9UJX2 597 aa5.81□□□□□ -1.48
NEK1-204ENST00000509912 F8W031 263 aaPredicted RBP5.8□□□□□ -1.48
NEK1-204ENST00000509912 MAN2B1O00754 1011 aa5.8□□□□□ -1.48
NEK1-204ENST00000509912 ALDH2P05091 517 aa5.8□□□□□ -1.48
NEK1-204ENST00000509912 RBM5P52756 815 aaKnown RBP eCLIP5.8□□□□□ -1.48
NEK1-204ENST00000509912 TUSC3Q13454 348 aa5.8□□□□□ -1.48
NEK1-204ENST00000509912 ZNF385CQ66K41 422 aaPredicted RBP5.8□□□□□ -1.48
NEK1-204ENST00000509912 B3GNT9Q6UX72 402 aa5.8□□□□□ -1.48
NEK1-204ENST00000509912 ATF7IPQ6VMQ6 1270 aa5.8□□□□□ -1.48
NEK1-204ENST00000509912 SOCS4Q8WXH5 440 aa5.8□□□□□ -1.48
NEK1-204ENST00000509912 SECISBP2LQ93073 1101 aaKnown RBP5.8□□□□□ -1.48
NEK1-204ENST00000509912 MYRFLQ96LU7 910 aa5.8□□□□□ -1.48
NEK1-204ENST00000509912 MENTQ9BUN1 341 aa5.8□□□□□ -1.48
NEK1-204ENST00000509912 DMRT3Q9NQL9 472 aa5.8□□□□□ -1.48
NEK1-204ENST00000509912 C9orf78Q9NZ63 289 aaPredicted RBP5.8□□□□□ -1.48
NEK1-204ENST00000509912 KCNH3Q9ULD8 1083 aa5.8□□□□□ -1.48
NEK1-204ENST00000509912 AGTPBP1Q9UPW5 1226 aa5.8□□□□□ -1.48
NEK1-204ENST00000509912 TELO2Q9Y4R8 837 aa5.8□□□□□ -1.48
NEK1-204ENST00000509912 hCG_1642624A0A1W2PR95 340 aa5.8□□□□□ -1.48
NEK1-204ENST00000509912 ZNF561-AS1K7EIQ3 104 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms