RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 ANKRD35Q8N283 1001 aa8.95□□□□□ -0.98
TRAPPC11-206ENST00000509857 ZNF808Q8N4W9 903 aaPredicted RBP8.95□□□□□ -0.98
TRAPPC11-206ENST00000509857 TEKT5Q96M29 485 aa8.95□□□□□ -0.98
TRAPPC11-206ENST00000509857 CDK5RAP1Q96SZ6 601 aaKnown RBP8.95□□□□□ -0.98
TRAPPC11-206ENST00000509857 BCO1Q9HAY6 547 aa8.95□□□□□ -0.98
TRAPPC11-206ENST00000509857 TSC22D4Q9Y3Q8 395 aa8.95□□□□□ -0.98
TRAPPC11-206ENST00000509857 ZFYVE16Q7Z3T8 1539 aa8.95□□□□□ -0.98
TRAPPC11-206ENST00000509857 INO80Q9ULG1 1556 aaPredicted RBP8.95□□□□□ -0.98
TRAPPC11-206ENST00000509857 DEPDC5O75140 1603 aa8.94□□□□□ -0.98
TRAPPC11-206ENST00000509857 HOXA3O43365 443 aaPredicted RBP8.94□□□□□ -0.98
TRAPPC11-206ENST00000509857 XPOTO43592 962 aaKnown RBP8.94□□□□□ -0.98
TRAPPC11-206ENST00000509857 NDUFS2O75306 463 aa8.94□□□□□ -0.98
TRAPPC11-206ENST00000509857 STC2O76061 302 aa8.94□□□□□ -0.98
TRAPPC11-206ENST00000509857 HSPA5P11021 654 aaKnown RBP8.94□□□□□ -0.98
TRAPPC11-206ENST00000509857 ECHS1P30084 290 aa8.94□□□□□ -0.98
TRAPPC11-206ENST00000509857 HHEXQ03014 270 aa8.94□□□□□ -0.98
TRAPPC11-206ENST00000509857 DDX10Q13206 875 aaKnown RBP8.94□□□□□ -0.98
TRAPPC11-206ENST00000509857 ACAP2Q15057 778 aa8.94□□□□□ -0.98
TRAPPC11-206ENST00000509857 LCE1DQ5T752 114 aa8.94□□□□□ -0.98
TRAPPC11-206ENST00000509857 APBB1IPQ7Z5R6 666 aaPredicted RBP8.94□□□□□ -0.98
TRAPPC11-206ENST00000509857 OR7D4Q8NG98 312 aa8.94□□□□□ -0.98
TRAPPC11-206ENST00000509857 CHMP4CQ96CF2 233 aa8.94□□□□□ -0.98
TRAPPC11-206ENST00000509857 ADOQ96SZ5 270 aa8.94□□□□□ -0.98
TRAPPC11-206ENST00000509857 PDCD2LQ9BRP1 358 aa8.94□□□□□ -0.98
TRAPPC11-206ENST00000509857 ROCK2O75116 1388 aaKnown RBP8.94□□□□□ -0.98
TRAPPC11-206ENST00000509857 CCDC144AA2RUR9 1427 aa8.94□□□□□ -0.98
TRAPPC11-206ENST00000509857 FANCAO15360 1455 aa8.94□□□□□ -0.98
TRAPPC11-206ENST00000509857 LAMC1P11047 1609 aa8.94□□□□□ -0.98
TRAPPC11-206ENST00000509857 FAM171A2A8MVW0 826 aa8.93□□□□□ -0.98
TRAPPC11-206ENST00000509857 C1QTNF3-AMACRE9PGA6 284 aa8.93□□□□□ -0.98
TRAPPC11-206ENST00000509857 ADRB1P08588 477 aa8.93□□□□□ -0.98
TRAPPC11-206ENST00000509857 NEK2P51955 445 aa8.93□□□□□ -0.98
TRAPPC11-206ENST00000509857 KRTAP10-2P60368 255 aa8.93□□□□□ -0.98
TRAPPC11-206ENST00000509857 ELAVL1Q15717 326 aaKnown RBP8.93□□□□□ -0.98
TRAPPC11-206ENST00000509857 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.93□□□□□ -0.98
TRAPPC11-206ENST00000509857 MIEF2Q96C03 454 aa8.93□□□□□ -0.98
TRAPPC11-206ENST00000509857 CDC5LQ99459 802 aaKnown RBP8.93□□□□□ -0.98
TRAPPC11-206ENST00000509857 HECAQ9UBI9 543 aaPredicted RBP8.93□□□□□ -0.98
TRAPPC11-206ENST00000509857 SPAG9O60271 1321 aaKnown RBP8.93□□□□□ -0.98
TRAPPC11-206ENST00000509857 CNTLNQ9NXG0 1405 aa8.93□□□□□ -0.98
TRAPPC11-206ENST00000509857 VWDEQ8N2E2 1590 aa8.92□□□□□ -0.98
TRAPPC11-206ENST00000509857 TRAPPC8Q9Y2L5 1435 aa8.92□□□□□ -0.98
TRAPPC11-206ENST00000509857 GPRASP1Q5JY77 1395 aa8.92□□□□□ -0.98
TRAPPC11-206ENST00000509857 CCDC7Q96M83 1385 aa8.92□□□□□ -0.98
TRAPPC11-206ENST00000509857 MUSKO15146 869 aa8.92□□□□□ -0.98
TRAPPC11-206ENST00000509857 GSPT1P15170 499 aaKnown RBP8.92□□□□□ -0.98
TRAPPC11-206ENST00000509857 ADSLP30566 484 aaPredicted RBP8.92□□□□□ -0.98
TRAPPC11-206ENST00000509857 SEPT2Q15019 361 aa8.92□□□□□ -0.98
TRAPPC11-206ENST00000509857 PRKD1Q15139 912 aaPredicted RBP8.92□□□□□ -0.98
TRAPPC11-206ENST00000509857 FAM214AQ32MH5 1076 aa8.92□□□□□ -0.98
TRAPPC11-206ENST00000509857 NBPF8Q3BBV2 869 aa8.92□□□□□ -0.98
TRAPPC11-206ENST00000509857 TMEM240Q5SV17 173 aa8.92□□□□□ -0.98
TRAPPC11-206ENST00000509857 DOK3Q7L591 496 aa8.92□□□□□ -0.98
TRAPPC11-206ENST00000509857 PNMA8AQ86V59 439 aaPredicted RBP8.92□□□□□ -0.98
TRAPPC11-206ENST00000509857 MDGA1Q8NFP4 955 aa8.92□□□□□ -0.98
TRAPPC11-206ENST00000509857 ATP7AQ04656 1500 aa8.91□□□□□ -0.98
TRAPPC11-206ENST00000509857 ZNF518AQ6AHZ1 1483 aa8.91□□□□□ -0.98
TRAPPC11-206ENST00000509857 CAPN14A8MX76 684 aa8.91□□□□□ -0.98
TRAPPC11-206ENST00000509857 CYP27B1O15528 508 aa8.91□□□□□ -0.98
TRAPPC11-206ENST00000509857 ADCY6O43306 1168 aa8.91□□□□□ -0.98
TRAPPC11-206ENST00000509857 IPO13O94829 963 aaKnown RBP8.91□□□□□ -0.98
TRAPPC11-206ENST00000509857 ENDOD1O94919 500 aa8.91□□□□□ -0.98
TRAPPC11-206ENST00000509857 SREBF1P36956 1147 aa8.91□□□□□ -0.98
TRAPPC11-206ENST00000509857 RECQLP46063 649 aaPredicted RBP8.91□□□□□ -0.98
TRAPPC11-206ENST00000509857 ODF1Q14990 250 aa8.91□□□□□ -0.98
TRAPPC11-206ENST00000509857 NOMO1Q15155 1222 aa8.91□□□□□ -0.98
TRAPPC11-206ENST00000509857 HTR3DQ70Z44 454 aa8.91□□□□□ -0.98
TRAPPC11-206ENST00000509857 PDZD4Q76G19 769 aaPredicted RBP8.91□□□□□ -0.98
TRAPPC11-206ENST00000509857 SGMS1Q86VZ5 419 aa8.91□□□□□ -0.98
TRAPPC11-206ENST00000509857 TRMT2AQ8IZ69 625 aaKnown RBP8.91□□□□□ -0.98
TRAPPC11-206ENST00000509857 OR2I1PQ8NGU4 316 aa8.91□□□□□ -0.98
TRAPPC11-206ENST00000509857 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.91□□□□□ -0.98
TRAPPC11-206ENST00000509857 KDM5CP41229 1560 aa8.9□□□□□ -0.98
TRAPPC11-206ENST00000509857 ADGRL1O94910 1474 aa8.9□□□□□ -0.98
TRAPPC11-206ENST00000509857 NEO1Q92859 1461 aa8.9□□□□□ -0.98
TRAPPC11-206ENST00000509857 PTPRTO14522 1441 aa8.9□□□□□ -0.98
TRAPPC11-206ENST00000509857 KRTAP23-1A1A580 65 aa8.9□□□□□ -0.98
TRAPPC11-206ENST00000509857 ALDH1L1O75891 902 aa8.9□□□□□ -0.98
TRAPPC11-206ENST00000509857 GNAT2P19087 354 aa8.9□□□□□ -0.98
TRAPPC11-206ENST00000509857 BUD31P41223 144 aaPredicted RBP8.9□□□□□ -0.98
TRAPPC11-206ENST00000509857 APBA1Q02410 837 aa8.9□□□□□ -0.98
TRAPPC11-206ENST00000509857 METTL24Q5JXM2 366 aa8.9□□□□□ -0.98
TRAPPC11-206ENST00000509857 PRAMEF14Q5SWL7 426 aa8.9□□□□□ -0.98
TRAPPC11-206ENST00000509857 ZBTB46Q86UZ6 589 aa8.9□□□□□ -0.98
TRAPPC11-206ENST00000509857 THEMISQ8N1K5 641 aaPredicted RBP8.9□□□□□ -0.98
TRAPPC11-206ENST00000509857 PPM1NQ8N819 430 aa8.9□□□□□ -0.98
TRAPPC11-206ENST00000509857 NRG4Q8WWG1 115 aa8.9□□□□□ -0.98
TRAPPC11-206ENST00000509857 CEP89Q96ST8 783 aa8.9□□□□□ -0.98
TRAPPC11-206ENST00000509857 DNM3Q9UQ16 869 aa8.9□□□□□ -0.98
TRAPPC11-206ENST00000509857 SIK3Q9Y2K2 1263 aa8.9□□□□□ -0.98
TRAPPC11-206ENST00000509857 BCORL1Q5H9F3 1711 aa8.9□□□□□ -0.98
TRAPPC11-206ENST00000509857 TET3O43151 1660 aa8.9□□□□□ -0.98
TRAPPC11-206ENST00000509857 PRDM15P57071 1507 aaPredicted RBP8.9□□□□□ -0.99
TRAPPC11-206ENST00000509857 LMTK2Q8IWU2 1503 aa8.9□□□□□ -0.99
TRAPPC11-206ENST00000509857 PLA2R1Q13018 1463 aa8.89□□□□□ -0.99
TRAPPC11-206ENST00000509857 KANK1Q14678 1352 aa8.89□□□□□ -0.99
TRAPPC11-206ENST00000509857 DHX29Q7Z478 1369 aaKnown RBP8.89□□□□□ -0.99
TRAPPC11-206ENST00000509857 ZRANB2O95218 330 aaKnown RBP eCLIP8.89□□□□□ -0.99
TRAPPC11-206ENST00000509857 ACRV1P26436 265 aa8.89□□□□□ -0.99
TRAPPC11-206ENST00000509857 GUCY1A2P33402 732 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms