RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 TTI2Q6NXR4 508 aa16.12■□□□□ 0.17
RNF4-213ENST00000509388 CRELD2Q6UXH1 353 aaPredicted RBP16.12■□□□□ 0.17
RNF4-213ENST00000509388 CREBRFQ8IUR6 639 aa16.12■□□□□ 0.17
RNF4-213ENST00000509388 BRSK2Q8IWQ3 736 aa16.12■□□□□ 0.17
RNF4-213ENST00000509388 CMTR2Q8IYT2 770 aaKnown RBP16.12■□□□□ 0.17
RNF4-213ENST00000509388 FIBCD1Q8N539 461 aa16.12■□□□□ 0.17
RNF4-213ENST00000509388 EEF2KMTQ96G04 330 aa16.12■□□□□ 0.17
RNF4-213ENST00000509388 FBXL18Q96ME1 805 aa16.12■□□□□ 0.17
RNF4-213ENST00000509388 ZFP42Q96MM3 310 aa16.12■□□□□ 0.17
RNF4-213ENST00000509388 CEP63Q96MT8 703 aa16.12■□□□□ 0.17
RNF4-213ENST00000509388 CASD1Q96PB1 797 aa16.12■□□□□ 0.17
RNF4-213ENST00000509388 FNBP1Q96RU3 617 aa16.12■□□□□ 0.17
RNF4-213ENST00000509388 ANP32EQ9BTT0 268 aa16.12■□□□□ 0.17
RNF4-213ENST00000509388 ASB7Q9H672 318 aa16.12■□□□□ 0.17
RNF4-213ENST00000509388 MSRAQ9UJ68 235 aa16.12■□□□□ 0.17
RNF4-213ENST00000509388 COLQQ9Y215 455 aaPredicted RBP16.12■□□□□ 0.17
RNF4-213ENST00000509388 GRXCR1A8MXD5 290 aa16.11■□□□□ 0.17
RNF4-213ENST00000509388 LACTBL1A8MY62 500 aa16.11■□□□□ 0.17
RNF4-213ENST00000509388 XPOTO43592 962 aaKnown RBP16.11■□□□□ 0.17
RNF4-213ENST00000509388 THP07101 528 aa16.11■□□□□ 0.17
RNF4-213ENST00000509388 SCNN1GP51170 649 aa16.11■□□□□ 0.17
RNF4-213ENST00000509388 RABGGTBP53611 331 aa16.11■□□□□ 0.17
RNF4-213ENST00000509388 HTRA4P83105 476 aaPredicted RBP16.11■□□□□ 0.17
RNF4-213ENST00000509388 RAB30Q15771 203 aa16.11■□□□□ 0.17
RNF4-213ENST00000509388 CCDC40Q4G0X9 1142 aa16.11■□□□□ 0.17
RNF4-213ENST00000509388 FAM186BQ8IYM0 893 aa16.11■□□□□ 0.17
RNF4-213ENST00000509388 LRRC43Q8N309 656 aa16.11■□□□□ 0.17
RNF4-213ENST00000509388 ZSWIM2Q8NEG5 633 aa16.11■□□□□ 0.17
RNF4-213ENST00000509388 CCDC127Q96BQ5 260 aa16.11■□□□□ 0.17
RNF4-213ENST00000509388 KIF12Q96FN5 646 aa16.11■□□□□ 0.17
RNF4-213ENST00000509388 SNX27Q96L92 541 aa16.11■□□□□ 0.17
RNF4-213ENST00000509388 TSPAN18Q96SJ8 248 aa16.11■□□□□ 0.17
RNF4-213ENST00000509388 SRRTQ9BXP5 876 aaKnown RBP16.11■□□□□ 0.17
RNF4-213ENST00000509388 PRO3102Q9H379 93 aa16.11■□□□□ 0.17
RNF4-213ENST00000509388 RNF19AQ9NV58 838 aa16.11■□□□□ 0.17
RNF4-213ENST00000509388 SLC38A7Q9NVC3 462 aa16.11■□□□□ 0.17
RNF4-213ENST00000509388 PCDHA11Q9Y5I1 949 aa16.11■□□□□ 0.17
RNF4-213ENST00000509388 SMIM28A0A1B0GU29 152 aa16.1■□□□□ 0.17
RNF4-213ENST00000509388 TTC26A0AVF1 554 aa16.1■□□□□ 0.17
RNF4-213ENST00000509388 SLC16A3O15427 465 aaKnown RBP16.1■□□□□ 0.17
RNF4-213ENST00000509388 AKAP3O75969 853 aa16.1■□□□□ 0.17
RNF4-213ENST00000509388 CAVIN2O95810 425 aa16.1■□□□□ 0.17
RNF4-213ENST00000509388 GNA14O95837 355 aa16.1■□□□□ 0.17
RNF4-213ENST00000509388 CASP4P49662 377 aa16.1■□□□□ 0.17
RNF4-213ENST00000509388 SPAG1Q07617 926 aa16.1■□□□□ 0.17
RNF4-213ENST00000509388 GRIK3Q13003 919 aa16.1■□□□□ 0.17
RNF4-213ENST00000509388 GLRA4Q5JXX5 417 aa16.1■□□□□ 0.17
RNF4-213ENST00000509388 FAM109BQ6ICB4 259 aaPredicted RBP16.1■□□□□ 0.17
RNF4-213ENST00000509388 C11orf57Q6ZUT1 292 aaPredicted RBP16.1■□□□□ 0.17
RNF4-213ENST00000509388 INTS8Q75QN2 995 aaKnown RBP16.1■□□□□ 0.17
RNF4-213ENST00000509388 FILIP1Q7Z7B0 1213 aa16.1■□□□□ 0.17
RNF4-213ENST00000509388 ENOX1Q8TC92 643 aaKnown RBP16.1■□□□□ 0.17
RNF4-213ENST00000509388 ZNF689Q96CS4 500 aaPredicted RBP16.1■□□□□ 0.17
RNF4-213ENST00000509388 DUSP9Q99956 384 aaKnown RBP16.1■□□□□ 0.17
RNF4-213ENST00000509388 MKNK1Q9BUB5 465 aa16.1■□□□□ 0.17
RNF4-213ENST00000509388 TBC1D13Q9NVG8 400 aa16.1■□□□□ 0.17
RNF4-213ENST00000509388 CNTN3Q9P232 1028 aa16.1■□□□□ 0.17
RNF4-213ENST00000509388 BECN2A8MW95 431 aa16.09■□□□□ 0.17
RNF4-213ENST00000509388 MAPK13O15264 365 aa16.09■□□□□ 0.17
RNF4-213ENST00000509388 DLATP10515 647 aaKnown RBP16.09■□□□□ 0.17
RNF4-213ENST00000509388 KCNE1P15382 129 aa16.09■□□□□ 0.17
RNF4-213ENST00000509388 TNNI1P19237 187 aa16.09■□□□□ 0.17
RNF4-213ENST00000509388 ZNF165P49910 485 aa16.09■□□□□ 0.17
RNF4-213ENST00000509388 AFF1P51825 1210 aaKnown RBP16.09■□□□□ 0.17
RNF4-213ENST00000509388 CYP24A1Q07973 514 aa16.09■□□□□ 0.17
RNF4-213ENST00000509388 SPATA1Q5VX52 437 aa16.09■□□□□ 0.17
RNF4-213ENST00000509388 ALKAL1Q6UXT8 129 aa16.09■□□□□ 0.17
RNF4-213ENST00000509388 FAM114A1Q8IWE2 563 aa16.09■□□□□ 0.17
RNF4-213ENST00000509388 CACTINQ8WUQ7 758 aaKnown RBP16.09■□□□□ 0.17
RNF4-213ENST00000509388 MFSD14AQ96MC6 490 aa16.09■□□□□ 0.17
RNF4-213ENST00000509388 FUCA2Q9BTY2 467 aa16.09■□□□□ 0.17
RNF4-213ENST00000509388 METTL14Q9HCE5 456 aaKnown RBP16.09■□□□□ 0.17
RNF4-213ENST00000509388 PDE11AQ9HCR9 933 aa16.09■□□□□ 0.17
RNF4-213ENST00000509388 AAASQ9NRG9 546 aa16.09■□□□□ 0.17
RNF4-213ENST00000509388 MIOSQ9NXC5 875 aa16.09■□□□□ 0.17
RNF4-213ENST00000509388 MAGEC2Q9UBF1 373 aaPredicted RBP16.09■□□□□ 0.17
RNF4-213ENST00000509388 UBQLN1Q9UMX0 589 aaKnown RBP16.09■□□□□ 0.17
RNF4-213ENST00000509388 DERAQ9Y315 318 aa16.09■□□□□ 0.17
RNF4-213ENST00000509388 R3HCC1Q9Y3T6 440 aaKnown RBP16.09■□□□□ 0.17
RNF4-213ENST00000509388 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.09■□□□□ 0.17
RNF4-213ENST00000509388 PDE4DIPQ5VU43 2346 aa16.09■□□□□ 0.17
RNF4-213ENST00000509388 CEP290O15078 2479 aa16.08■□□□□ 0.17
RNF4-213ENST00000509388 SMTNL1A8MU46 457 aa16.08■□□□□ 0.16
RNF4-213ENST00000509388 INPPL1O15357 1258 aa16.08■□□□□ 0.16
RNF4-213ENST00000509388 ADRB2P07550 413 aa16.08■□□□□ 0.16
RNF4-213ENST00000509388 TFAMQ00059 246 aaKnown RBP16.08■□□□□ 0.16
RNF4-213ENST00000509388 MYL5Q02045 173 aa16.08■□□□□ 0.16
RNF4-213ENST00000509388 TMEM132DQ14C87 1099 aa16.08■□□□□ 0.16
RNF4-213ENST00000509388 PSMD6Q15008 389 aa16.08■□□□□ 0.16
RNF4-213ENST00000509388 XKR4Q5GH76 650 aa16.08■□□□□ 0.16
RNF4-213ENST00000509388 JADE1Q6IE81 842 aa16.08■□□□□ 0.16
RNF4-213ENST00000509388 LRRC55Q6ZSA7 311 aa16.08■□□□□ 0.16
RNF4-213ENST00000509388 NT5DC4Q86YG4 428 aa16.08■□□□□ 0.16
RNF4-213ENST00000509388 ZC3H3Q8IXZ2 948 aaKnown RBP16.08■□□□□ 0.16
RNF4-213ENST00000509388 GSTCDQ8NEC7 633 aa16.08■□□□□ 0.16
RNF4-213ENST00000509388 BEST2Q8NFU1 509 aa16.08■□□□□ 0.16
RNF4-213ENST00000509388 PBX4Q9BYU1 374 aa16.08■□□□□ 0.16
RNF4-213ENST00000509388 TSPY26PQ9H489 355 aa16.08■□□□□ 0.16
RNF4-213ENST00000509388 ARMCX3Q9UH62 379 aaPredicted RBP16.08■□□□□ 0.16
RNF4-213ENST00000509388 C2CD2Q9Y426 696 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms