RNA–Protein interactions for RNA: ENST00000508503.5

CLDND1-218, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 707 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-218ENST00000508503 USP49Q70CQ1 688 aa13.31□□□□□ -0.28
CLDND1-218ENST00000508503 RABGGTAQ92696 567 aa13.31□□□□□ -0.28
CLDND1-218ENST00000508503 RAD54LQ92698 747 aa13.31□□□□□ -0.28
CLDND1-218ENST00000508503 ZBTB45Q96K62 511 aaPredicted RBP13.31□□□□□ -0.28
CLDND1-218ENST00000508503 RPGRIP1Q96KN7 1286 aa13.31□□□□□ -0.28
CLDND1-218ENST00000508503 APOL5Q9BWW9 433 aa13.31□□□□□ -0.28
CLDND1-218ENST00000508503 ZSCAN16Q9H4T2 348 aaPredicted RBP13.31□□□□□ -0.28
CLDND1-218ENST00000508503 POMKQ9H5K3 350 aa13.31□□□□□ -0.28
CLDND1-218ENST00000508503 LARSQ9P2J5 1176 aaKnown RBP13.31□□□□□ -0.28
CLDND1-218ENST00000508503 CACNG4Q9UBN1 327 aa13.31□□□□□ -0.28
CLDND1-218ENST00000508503 MUTYHQ9UIF7 546 aa13.31□□□□□ -0.28
CLDND1-218ENST00000508503 CDH22Q9UJ99 828 aa13.31□□□□□ -0.28
CLDND1-218ENST00000508503 FBXO2Q9UK22 296 aaPredicted RBP13.31□□□□□ -0.28
CLDND1-218ENST00000508503 USTQ9Y2C2 406 aa13.31□□□□□ -0.28
CLDND1-218ENST00000508503 CASTOR2A6NHX0 329 aa13.3□□□□□ -0.28
CLDND1-218ENST00000508503 H0YCG3 227 aa13.3□□□□□ -0.28
CLDND1-218ENST00000508503 C2CD2LO14523 706 aa13.3□□□□□ -0.28
CLDND1-218ENST00000508503 MEFVO15553 781 aaPredicted RBP13.3□□□□□ -0.28
CLDND1-218ENST00000508503 PLCG1P19174 1290 aa13.3□□□□□ -0.28
CLDND1-218ENST00000508503 IGFBP6P24592 240 aaPredicted RBP13.3□□□□□ -0.28
CLDND1-218ENST00000508503 MCL1Q07820 350 aa13.3□□□□□ -0.28
CLDND1-218ENST00000508503 RAD51AP2Q09MP3 1159 aa13.3□□□□□ -0.28
CLDND1-218ENST00000508503 ELAVL2Q12926 359 aaKnown RBP13.3□□□□□ -0.28
CLDND1-218ENST00000508503 MCM6Q14566 821 aa13.3□□□□□ -0.28
CLDND1-218ENST00000508503 SLC39A14Q15043 492 aa13.3□□□□□ -0.28
CLDND1-218ENST00000508503 KARSQ15046 597 aaKnown RBP13.3□□□□□ -0.28
CLDND1-218ENST00000508503 UPP1Q16831 310 aa13.3□□□□□ -0.28
CLDND1-218ENST00000508503 RARS2Q5T160 578 aaKnown RBP13.3□□□□□ -0.28
CLDND1-218ENST00000508503 HAUS6Q7Z4H7 955 aa13.3□□□□□ -0.28
CLDND1-218ENST00000508503 BMP8AQ7Z5Y6 402 aa13.3□□□□□ -0.28
CLDND1-218ENST00000508503 LNX1Q8TBB1 728 aaPredicted RBP13.3□□□□□ -0.28
CLDND1-218ENST00000508503 FEZF2Q8TBJ5 459 aa13.3□□□□□ -0.28
CLDND1-218ENST00000508503 PIK3R5Q8WYR1 880 aa13.3□□□□□ -0.28
CLDND1-218ENST00000508503 EPSTI1Q96J88 318 aa13.3□□□□□ -0.28
CLDND1-218ENST00000508503 UROC1Q96N76 676 aa13.3□□□□□ -0.28
CLDND1-218ENST00000508503 ZMAT2Q96NC0 199 aaKnown RBP13.3□□□□□ -0.28
CLDND1-218ENST00000508503 FIZ1Q96SL8 496 aa13.3□□□□□ -0.28
CLDND1-218ENST00000508503 REEP2Q9BRK0 252 aa13.3□□□□□ -0.28
CLDND1-218ENST00000508503 CCDC94Q9BW85 323 aaPredicted RBP13.3□□□□□ -0.28
CLDND1-218ENST00000508503 PLEKHA4Q9H4M7 779 aa13.3□□□□□ -0.28
CLDND1-218ENST00000508503 SFXN1Q9H9B4 322 aa13.3□□□□□ -0.28
CLDND1-218ENST00000508503 DPP7Q9UHL4 492 aa13.3□□□□□ -0.28
CLDND1-218ENST00000508503 NR2E1Q9Y466 385 aa13.3□□□□□ -0.28
CLDND1-218ENST00000508503 SF3B1O75533 1304 aaKnown RBP eCLIP13.3□□□□□ -0.28
CLDND1-218ENST00000508503 CITO14578 2027 aa13.29□□□□□ -0.28
CLDND1-218ENST00000508503 FAM86C2PA6NEL3 165 aa13.29□□□□□ -0.28
CLDND1-218ENST00000508503 STX6O43752 255 aa13.29□□□□□ -0.28
CLDND1-218ENST00000508503 KIF4AO95239 1232 aa13.29□□□□□ -0.28
CLDND1-218ENST00000508503 PIGRP01833 764 aa13.29□□□□□ -0.28
CLDND1-218ENST00000508503 FGFR3P22607 806 aa13.29□□□□□ -0.28
CLDND1-218ENST00000508503 ZXDAP98168 799 aa13.29□□□□□ -0.28
CLDND1-218ENST00000508503 CREMQ03060 361 aa13.29□□□□□ -0.28
CLDND1-218ENST00000508503 STRN3Q13033 797 aa13.29□□□□□ -0.28
CLDND1-218ENST00000508503 SLC10A6Q3KNW5 377 aa13.29□□□□□ -0.28
CLDND1-218ENST00000508503 ZNF568Q3ZCX4 644 aa13.29□□□□□ -0.28
CLDND1-218ENST00000508503 RTP2Q5QGT7 225 aa13.29□□□□□ -0.28
CLDND1-218ENST00000508503 TMC5Q6UXY8 1006 aa13.29□□□□□ -0.28
CLDND1-218ENST00000508503 GPBP1Q86WP2 473 aa13.29□□□□□ -0.28
CLDND1-218ENST00000508503 ZDHHC14Q8IZN3 488 aa13.29□□□□□ -0.28
CLDND1-218ENST00000508503 RIN2Q8WYP3 895 aaPredicted RBP13.29□□□□□ -0.28
CLDND1-218ENST00000508503 B3GALT6Q96L58 329 aa13.29□□□□□ -0.28
CLDND1-218ENST00000508503 ACAP3Q96P50 834 aa13.29□□□□□ -0.28
CLDND1-218ENST00000508503 CLSTN3Q9BQT9 956 aa13.29□□□□□ -0.28
CLDND1-218ENST00000508503 TCHPQ9BT92 498 aa13.29□□□□□ -0.28
CLDND1-218ENST00000508503 TTPALQ9BTX7 342 aa13.29□□□□□ -0.28
CLDND1-218ENST00000508503 HAPLN2Q9GZV7 340 aa13.29□□□□□ -0.28
CLDND1-218ENST00000508503 ST6GALNAC4Q9H4F1 302 aa13.29□□□□□ -0.28
CLDND1-218ENST00000508503 TOPORSQ9NS56 1045 aaPredicted RBP13.29□□□□□ -0.28
CLDND1-218ENST00000508503 CNTN3Q9P232 1028 aa13.29□□□□□ -0.28
CLDND1-218ENST00000508503 PLXNA3P51805 1871 aa13.29□□□□□ -0.28
CLDND1-218ENST00000508503 CLDN3O15551 220 aa13.28□□□□□ -0.28
CLDND1-218ENST00000508503 TGM5O43548 720 aa13.28□□□□□ -0.28
CLDND1-218ENST00000508503 GLUD1P00367 558 aa13.28□□□□□ -0.28
CLDND1-218ENST00000508503 ADRB2P07550 413 aa13.28□□□□□ -0.28
CLDND1-218ENST00000508503 WEE2P0C1S8 567 aa13.28□□□□□ -0.28
CLDND1-218ENST00000508503 PDIA4P13667 645 aaKnown RBP13.28□□□□□ -0.28
CLDND1-218ENST00000508503 MARCKSP29966 332 aaPredicted RBP13.28□□□□□ -0.28
CLDND1-218ENST00000508503 NASPP49321 788 aaPredicted RBP13.28□□□□□ -0.28
CLDND1-218ENST00000508503 CLCNKBP51801 687 aa13.28□□□□□ -0.28
CLDND1-218ENST00000508503 YARSP54577 528 aaKnown RBP13.28□□□□□ -0.28
CLDND1-218ENST00000508503 GTF2BQ00403 316 aa13.28□□□□□ -0.28
CLDND1-218ENST00000508503 CACNB1Q02641 598 aaPredicted RBP13.28□□□□□ -0.28
CLDND1-218ENST00000508503 SOX4Q06945 474 aaPredicted RBP13.28□□□□□ -0.28
CLDND1-218ENST00000508503 FAM171A1Q5VUB5 890 aa13.28□□□□□ -0.28
CLDND1-218ENST00000508503 ZBTB33Q86T24 672 aa13.28□□□□□ -0.28
CLDND1-218ENST00000508503 LARP4BQ92615 738 aaKnown RBP13.28□□□□□ -0.28
CLDND1-218ENST00000508503 DDX27Q96GQ7 796 aaKnown RBP13.28□□□□□ -0.28
CLDND1-218ENST00000508503 SNX27Q96L92 541 aa13.28□□□□□ -0.28
CLDND1-218ENST00000508503 USP28Q96RU2 1077 aa13.28□□□□□ -0.28
CLDND1-218ENST00000508503 PLEKHA5Q9HAU0 1116 aa13.28□□□□□ -0.28
CLDND1-218ENST00000508503 PARVGQ9HBI0 331 aa13.28□□□□□ -0.28
CLDND1-218ENST00000508503 SLC38A7Q9NVC3 462 aa13.28□□□□□ -0.28
CLDND1-218ENST00000508503 STK17AQ9UEE5 414 aa13.28□□□□□ -0.28
CLDND1-218ENST00000508503 TBX20Q9UMR3 447 aa13.28□□□□□ -0.28
CLDND1-218ENST00000508503 VWA8A3KMH1 1905 aa13.28□□□□□ -0.28
CLDND1-218ENST00000508503 DENND4AQ7Z401 1863 aa13.27□□□□□ -0.28
CLDND1-218ENST00000508503 C2orf16Q68DN1 1984 aa13.27□□□□□ -0.28
CLDND1-218ENST00000508503 ZNF318Q5VUA4 2279 aa13.27□□□□□ -0.28
CLDND1-218ENST00000508503 CCDC195A0A1B0GUA6 201 aa13.27□□□□□ -0.29
CLDND1-218ENST00000508503 TTC26A0AVF1 554 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms