RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 TISP43B9A030 160 aa9.4□□□□□ -0.9
USP46-207ENST00000508499 ENPP3O14638 875 aa9.4□□□□□ -0.9
USP46-207ENST00000508499 IL18RAPO95256 599 aa9.4□□□□□ -0.9
USP46-207ENST00000508499 ATF7P17544 494 aaPredicted RBP9.4□□□□□ -0.9
USP46-207ENST00000508499 FGFR4P22455 802 aa9.4□□□□□ -0.9
USP46-207ENST00000508499 EEF1GP26641 437 aaKnown RBP9.4□□□□□ -0.9
USP46-207ENST00000508499 SPAG1Q07617 926 aa9.4□□□□□ -0.9
USP46-207ENST00000508499 SMYD5Q6GMV2 418 aa9.4□□□□□ -0.9
USP46-207ENST00000508499 KLHL10Q6JEL2 608 aa9.4□□□□□ -0.9
USP46-207ENST00000508499 C16orf59Q7L2K0 433 aa9.4□□□□□ -0.9
USP46-207ENST00000508499 ECHDC2Q86YB7 292 aa9.4□□□□□ -0.9
USP46-207ENST00000508499 BRSK2Q8IWQ3 736 aa9.4□□□□□ -0.9
USP46-207ENST00000508499 BADQ92934 168 aa9.4□□□□□ -0.9
USP46-207ENST00000508499 ZBTB45Q96K62 511 aaPredicted RBP9.4□□□□□ -0.9
USP46-207ENST00000508499 TCHPQ9BT92 498 aa9.4□□□□□ -0.9
USP46-207ENST00000508499 IKZF4Q9H2S9 585 aa9.4□□□□□ -0.9
USP46-207ENST00000508499 TOPORSQ9NS56 1045 aaPredicted RBP9.4□□□□□ -0.9
USP46-207ENST00000508499 ANKFY1Q9P2R3 1169 aa9.4□□□□□ -0.9
USP46-207ENST00000508499 FRMD4BQ9Y2L6 1034 aa9.4□□□□□ -0.9
USP46-207ENST00000508499 C2CD2Q9Y426 696 aa9.4□□□□□ -0.9
USP46-207ENST00000508499 NFE2L3Q9Y4A8 694 aa9.4□□□□□ -0.9
USP46-207ENST00000508499 IPPQ9Y573 584 aa9.4□□□□□ -0.9
USP46-207ENST00000508499 PCDHB2Q9Y5E7 798 aa9.4□□□□□ -0.9
USP46-207ENST00000508499 HOXA2O43364 376 aa9.39□□□□□ -0.91
USP46-207ENST00000508499 EXOC3O60645 756 aa9.39□□□□□ -0.91
USP46-207ENST00000508499 AKAP3O75969 853 aa9.39□□□□□ -0.91
USP46-207ENST00000508499 EPB41P11171 864 aaKnown RBP9.39□□□□□ -0.91
USP46-207ENST00000508499 KCNE1P15382 129 aa9.39□□□□□ -0.91
USP46-207ENST00000508499 BMP8BP34820 402 aa9.39□□□□□ -0.91
USP46-207ENST00000508499 AP3M2P53677 418 aa9.39□□□□□ -0.91
USP46-207ENST00000508499 PSMD6Q15008 389 aa9.39□□□□□ -0.91
USP46-207ENST00000508499 TMEM240Q5SV17 173 aa9.39□□□□□ -0.91
USP46-207ENST00000508499 NPAS4Q8IUM7 802 aa9.39□□□□□ -0.91
USP46-207ENST00000508499 TRIM59Q8IWR1 403 aa9.39□□□□□ -0.91
USP46-207ENST00000508499 PHOSPHO2Q8TCD6 241 aa9.39□□□□□ -0.91
USP46-207ENST00000508499 PARD3BQ8TEW8 1205 aa9.39□□□□□ -0.91
USP46-207ENST00000508499 HERVK_113Q902F9 699 aa9.39□□□□□ -0.91
USP46-207ENST00000508499 DPF3Q92784 378 aa9.39□□□□□ -0.91
USP46-207ENST00000508499 TOP1MTQ969P6 601 aa9.39□□□□□ -0.91
USP46-207ENST00000508499 ACAP3Q96P50 834 aa9.39□□□□□ -0.91
USP46-207ENST00000508499 CCDC94Q9BW85 323 aaPredicted RBP9.39□□□□□ -0.91
USP46-207ENST00000508499 SRRTQ9BXP5 876 aaKnown RBP9.39□□□□□ -0.91
USP46-207ENST00000508499 EIF2AQ9BY44 585 aaKnown RBP9.39□□□□□ -0.91
USP46-207ENST00000508499 TRIM6Q9C030 488 aaPredicted RBP9.39□□□□□ -0.91
USP46-207ENST00000508499 GZF1Q9H116 711 aaPredicted RBP9.39□□□□□ -0.91
USP46-207ENST00000508499 CBX8Q9HC52 389 aa9.39□□□□□ -0.91
USP46-207ENST00000508499 CNTN3Q9P232 1028 aa9.39□□□□□ -0.91
USP46-207ENST00000508499 GBF1Q92538 1859 aa9.39□□□□□ -0.91
USP46-207ENST00000508499 KIAA1671Q9BY89 1806 aa9.39□□□□□ -0.91
USP46-207ENST00000508499 NLRC5Q86WI3 1866 aa9.39□□□□□ -0.91
USP46-207ENST00000508499 CARNS1A5YM72 827 aa9.39□□□□□ -0.91
USP46-207ENST00000508499 BECN2A8MW95 431 aa9.39□□□□□ -0.91
USP46-207ENST00000508499 CLIC2O15247 247 aa9.39□□□□□ -0.91
USP46-207ENST00000508499 NPTXRO95502 500 aa9.39□□□□□ -0.91
USP46-207ENST00000508499 FGBP02675 491 aa9.39□□□□□ -0.91
USP46-207ENST00000508499 STAG3L1P0CL83 205 aa9.39□□□□□ -0.91
USP46-207ENST00000508499 CYP3A5P20815 502 aa9.39□□□□□ -0.91
USP46-207ENST00000508499 GTF2H1P32780 548 aa9.39□□□□□ -0.91
USP46-207ENST00000508499 CYP24A1Q07973 514 aa9.39□□□□□ -0.91
USP46-207ENST00000508499 BFSP1Q12934 665 aa9.39□□□□□ -0.91
USP46-207ENST00000508499 ZBTB6Q15916 424 aa9.39□□□□□ -0.91
USP46-207ENST00000508499 ENOX2Q16206 610 aaKnown RBP9.39□□□□□ -0.91
USP46-207ENST00000508499 TCTN1Q2MV58 587 aa9.39□□□□□ -0.91
USP46-207ENST00000508499 SLC10A6Q3KNW5 377 aa9.39□□□□□ -0.91
USP46-207ENST00000508499 AGMOQ6ZNB7 445 aa9.39□□□□□ -0.91
USP46-207ENST00000508499 WDR49Q8IV35 697 aa9.39□□□□□ -0.91
USP46-207ENST00000508499 AOPEPQ8N6M6 819 aa9.39□□□□□ -0.91
USP46-207ENST00000508499 SNX27Q96L92 541 aa9.39□□□□□ -0.91
USP46-207ENST00000508499 GDF15Q99988 308 aa9.39□□□□□ -0.91
USP46-207ENST00000508499 LBHD1Q9BQE6 289 aaPredicted RBP9.39□□□□□ -0.91
USP46-207ENST00000508499 MTIF3Q9H2K0 278 aaKnown RBP9.39□□□□□ -0.91
USP46-207ENST00000508499 NXF3Q9H4D5 531 aaKnown RBP9.39□□□□□ -0.91
USP46-207ENST00000508499 RC3H2Q9HBD1 1191 aaKnown RBP9.39□□□□□ -0.91
USP46-207ENST00000508499 KANSL3Q9P2N6 904 aa9.39□□□□□ -0.91
USP46-207ENST00000508499 ARMCX3Q9UH62 379 aaPredicted RBP9.39□□□□□ -0.91
USP46-207ENST00000508499 USP20Q9Y2K6 914 aa9.39□□□□□ -0.91
USP46-207ENST00000508499 GTPBP10A4D1E9 387 aaKnown RBP9.38□□□□□ -0.91
USP46-207ENST00000508499 P4HA2O15460 535 aa9.38□□□□□ -0.91
USP46-207ENST00000508499 MEFVO15553 781 aaPredicted RBP9.38□□□□□ -0.91
USP46-207ENST00000508499 STX10O60499 249 aa9.38□□□□□ -0.91
USP46-207ENST00000508499 RECQL4O94761 1208 aa9.38□□□□□ -0.91
USP46-207ENST00000508499 ITGA4P13612 1032 aa9.38□□□□□ -0.91
USP46-207ENST00000508499 PAX3P23760 479 aa9.38□□□□□ -0.91
USP46-207ENST00000508499 CASP4P49662 377 aa9.38□□□□□ -0.91
USP46-207ENST00000508499 ACOT2P49753 483 aa9.38□□□□□ -0.91
USP46-207ENST00000508499 CYP2J2P51589 502 aa9.38□□□□□ -0.91
USP46-207ENST00000508499 YARSP54577 528 aaKnown RBP9.38□□□□□ -0.91
USP46-207ENST00000508499 STX17P56962 302 aa9.38□□□□□ -0.91
USP46-207ENST00000508499 WDR5P61964 334 aaKnown RBP9.38□□□□□ -0.91
USP46-207ENST00000508499 TPM4P67936 248 aa9.38□□□□□ -0.91
USP46-207ENST00000508499 TPD52L1Q16890 204 aaPredicted RBP9.38□□□□□ -0.91
USP46-207ENST00000508499 UVSSAQ2YD98 709 aa9.38□□□□□ -0.91
USP46-207ENST00000508499 TCP11X2Q5H9J9 407 aa9.38□□□□□ -0.91
USP46-207ENST00000508499 C15orf39Q6ZRI6 1047 aa9.38□□□□□ -0.91
USP46-207ENST00000508499 APTXQ7Z2E3 356 aaKnown RBP9.38□□□□□ -0.91
USP46-207ENST00000508499 DEFB128Q7Z7B8 93 aa9.38□□□□□ -0.91
USP46-207ENST00000508499 CBWD2Q8IUF1 395 aa9.38□□□□□ -0.91
USP46-207ENST00000508499 FAM186BQ8IYM0 893 aa9.38□□□□□ -0.91
USP46-207ENST00000508499 CEP120Q8N960 986 aa9.38□□□□□ -0.91
USP46-207ENST00000508499 GSTCDQ8NEC7 633 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms