RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 ATXN7L2Q5T6C5 722 aaPredicted RBP6.77□□□□□ -1.33
DHFR-204ENST00000508282 METRNLQ641Q3 311 aa6.77□□□□□ -1.33
DHFR-204ENST00000508282 GDF7Q7Z4P5 450 aa6.77□□□□□ -1.33
DHFR-204ENST00000508282 MRGPREQ86SM8 312 aa6.77□□□□□ -1.33
DHFR-204ENST00000508282 ZGPATQ8N5A5 531 aaKnown RBP6.77□□□□□ -1.33
DHFR-204ENST00000508282 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.77□□□□□ -1.33
DHFR-204ENST00000508282 CCHCR1Q8TD31 782 aa6.77□□□□□ -1.33
DHFR-204ENST00000508282 NEU4Q8WWR8 484 aaPredicted RBP6.77□□□□□ -1.33
DHFR-204ENST00000508282 LARP4BQ92615 738 aaKnown RBP6.77□□□□□ -1.33
DHFR-204ENST00000508282 LENG9Q96B70 501 aa6.77□□□□□ -1.33
DHFR-204ENST00000508282 FAM193BQ96PV7 902 aaPredicted RBP6.77□□□□□ -1.33
DHFR-204ENST00000508282 DCLRE1CQ96SD1 692 aaKnown RBP6.77□□□□□ -1.33
DHFR-204ENST00000508282 NEU1Q99519 415 aa6.77□□□□□ -1.33
DHFR-204ENST00000508282 MRI1Q9BV20 369 aa6.77□□□□□ -1.33
DHFR-204ENST00000508282 SLC46A2Q9BY10 475 aa6.77□□□□□ -1.33
DHFR-204ENST00000508282 TEX101Q9BY14 249 aa6.77□□□□□ -1.33
DHFR-204ENST00000508282 MOCS1Q9NZB8 636 aa6.77□□□□□ -1.33
DHFR-204ENST00000508282 TRPM5Q9NZQ8 1165 aa6.77□□□□□ -1.33
DHFR-204ENST00000508282 INTUQ9ULD6 942 aa6.77□□□□□ -1.33
DHFR-204ENST00000508282 DRGXA6NNA5 263 aa6.76□□□□□ -1.33
DHFR-204ENST00000508282 ZNF185O15231 689 aa6.76□□□□□ -1.33
DHFR-204ENST00000508282 XPOTO43592 962 aaKnown RBP6.76□□□□□ -1.33
DHFR-204ENST00000508282 ADH4P08319 380 aa6.76□□□□□ -1.33
DHFR-204ENST00000508282 RAP2AP10114 183 aa6.76□□□□□ -1.33
DHFR-204ENST00000508282 PTGS2P35354 604 aa6.76□□□□□ -1.33
DHFR-204ENST00000508282 RAP2BP61225 183 aa6.76□□□□□ -1.33
DHFR-204ENST00000508282 KRT85P78386 507 aa6.76□□□□□ -1.33
DHFR-204ENST00000508282 PTPROQ16827 1216 aa6.76□□□□□ -1.33
DHFR-204ENST00000508282 RRP12Q5JTH9 1297 aaKnown RBP6.76□□□□□ -1.33
DHFR-204ENST00000508282 FAM102AQ5T9C2 384 aaPredicted RBP6.76□□□□□ -1.33
DHFR-204ENST00000508282 ZCRB1Q8TBF4 217 aaKnown RBP6.76□□□□□ -1.33
DHFR-204ENST00000508282 CASKIN2Q8WXE0 1202 aa6.76□□□□□ -1.33
DHFR-204ENST00000508282 HAS1Q92839 578 aa6.76□□□□□ -1.33
DHFR-204ENST00000508282 TMEM140Q9NV12 185 aa6.76□□□□□ -1.33
DHFR-204ENST00000508282 SLC23A1Q9UHI7 598 aa6.76□□□□□ -1.33
DHFR-204ENST00000508282 FZD1Q9UP38 647 aa6.76□□□□□ -1.33
DHFR-204ENST00000508282 ACTL7AQ9Y615 435 aa6.76□□□□□ -1.33
DHFR-204ENST00000508282 TNKSO95271 1327 aa6.76□□□□□ -1.33
DHFR-204ENST00000508282 ATP5JP18859 108 aa6.75□□□□□ -1.33
DHFR-204ENST00000508282 CHN2P52757 468 aa6.75□□□□□ -1.33
DHFR-204ENST00000508282 ATP8B2P98198 1209 aa6.75□□□□□ -1.33
DHFR-204ENST00000508282 MTM1Q13496 603 aa6.75□□□□□ -1.33
DHFR-204ENST00000508282 FHL2Q14192 279 aa6.75□□□□□ -1.33
DHFR-204ENST00000508282 PDCD4Q53EL6 469 aaKnown RBP6.75□□□□□ -1.33
DHFR-204ENST00000508282 OTUD7BQ6GQQ9 843 aa6.75□□□□□ -1.33
DHFR-204ENST00000508282 Q6ZPA2 131 aa6.75□□□□□ -1.33
DHFR-204ENST00000508282 ZNF627Q7L945 461 aa6.75□□□□□ -1.33
DHFR-204ENST00000508282 AMER2Q8N7J2 671 aa6.75□□□□□ -1.33
DHFR-204ENST00000508282 CYFIP2Q96F07 1278 aa6.75□□□□□ -1.33
DHFR-204ENST00000508282 TEKT5Q96M29 485 aa6.75□□□□□ -1.33
DHFR-204ENST00000508282 MYOCQ99972 504 aa6.75□□□□□ -1.33
DHFR-204ENST00000508282 C7orf25Q9BPX7 421 aa6.75□□□□□ -1.33
DHFR-204ENST00000508282 MLST8Q9BVC4 326 aa6.75□□□□□ -1.33
DHFR-204ENST00000508282 ASPSCR1Q9BZE9 553 aa6.75□□□□□ -1.33
DHFR-204ENST00000508282 BRINP2Q9C0B6 783 aa6.75□□□□□ -1.33
DHFR-204ENST00000508282 ANKRD62A6NC57 917 aa6.74□□□□□ -1.33
DHFR-204ENST00000508282 DIRC3C9JPN6 131 aa6.74□□□□□ -1.33
DHFR-204ENST00000508282 GPR32O75388 356 aa6.74□□□□□ -1.33
DHFR-204ENST00000508282 NCR1O76036 304 aa6.74□□□□□ -1.33
DHFR-204ENST00000508282 ODF1Q14990 250 aa6.74□□□□□ -1.33
DHFR-204ENST00000508282 PTPN21Q16825 1174 aa6.74□□□□□ -1.33
DHFR-204ENST00000508282 LRRC55Q6ZSA7 311 aa6.74□□□□□ -1.33
DHFR-204ENST00000508282 FAM177A1Q8N128 213 aaPredicted RBP6.74□□□□□ -1.33
DHFR-204ENST00000508282 MRIQ9BWK5 157 aa6.74□□□□□ -1.33
DHFR-204ENST00000508282 MANSC1Q9H8J5 431 aa6.74□□□□□ -1.33
DHFR-204ENST00000508282 AKIP1Q9NQ31 210 aa6.74□□□□□ -1.33
DHFR-204ENST00000508282 USP15Q9Y4E8 981 aaPredicted RBP6.74□□□□□ -1.33
DHFR-204ENST00000508282 MRFAP1Q9Y605 127 aa6.74□□□□□ -1.33
DHFR-204ENST00000508282 HS3ST4Q9Y661 456 aa6.74□□□□□ -1.33
DHFR-204ENST00000508282 MYBBP1AQ9BQG0 1328 aaKnown RBP6.74□□□□□ -1.33
DHFR-204ENST00000508282 ITGB1P05556 798 aa6.73□□□□□ -1.33
DHFR-204ENST00000508282 EDNRBP24530 442 aa6.73□□□□□ -1.33
DHFR-204ENST00000508282 ZNF529Q6P280 563 aa6.73□□□□□ -1.33
DHFR-204ENST00000508282 SEM1Q6ZVN7 128 aa6.73□□□□□ -1.33
DHFR-204ENST00000508282 MED25Q71SY5 747 aa6.73□□□□□ -1.33
DHFR-204ENST00000508282 RHOT1Q8IXI2 618 aa6.73□□□□□ -1.33
DHFR-204ENST00000508282 DRC7Q8IY82 874 aa6.73□□□□□ -1.33
DHFR-204ENST00000508282 RPUSD2Q8IZ73 545 aaKnown RBP6.73□□□□□ -1.33
DHFR-204ENST00000508282 SYNE4Q8N205 404 aa6.73□□□□□ -1.33
DHFR-204ENST00000508282 PHACTR3Q96KR7 559 aa6.73□□□□□ -1.33
DHFR-204ENST00000508282 SMAD5Q99717 465 aaKnown RBP6.73□□□□□ -1.33
DHFR-204ENST00000508282 SLC13A1Q9BZW2 595 aa6.73□□□□□ -1.33
DHFR-204ENST00000508282 FAM30AQ9NZY2 134 aa6.73□□□□□ -1.33
DHFR-204ENST00000508282 SAP30BPQ9UHR5 308 aaKnown RBP6.73□□□□□ -1.33
DHFR-204ENST00000508282 LIMCH1Q9UPQ0 1083 aa6.73□□□□□ -1.33
DHFR-204ENST00000508282 RUVBL1Q9Y265 456 aaKnown RBP6.73□□□□□ -1.33
DHFR-204ENST00000508282 IPPQ9Y573 584 aa6.73□□□□□ -1.33
DHFR-204ENST00000508282 GAGE12BA1L429 117 aa6.72□□□□□ -1.33
DHFR-204ENST00000508282 GAGE12HA6NDE8 117 aa6.72□□□□□ -1.33
DHFR-204ENST00000508282 RNASET2O00584 256 aaKnown RBP6.72□□□□□ -1.33
DHFR-204ENST00000508282 HTRA2O43464 458 aaPredicted RBP6.72□□□□□ -1.33
DHFR-204ENST00000508282 LAG3P18627 525 aa6.72□□□□□ -1.33
DHFR-204ENST00000508282 TARDBPQ13148 414 aaKnown RBP eCLIP6.72□□□□□ -1.33
DHFR-204ENST00000508282 UBXN2BQ14CS0 331 aa6.72□□□□□ -1.33
DHFR-204ENST00000508282 BEAN1Q3B7T3 259 aa6.72□□□□□ -1.33
DHFR-204ENST00000508282 BRDTQ58F21 947 aaPredicted RBP6.72□□□□□ -1.33
DHFR-204ENST00000508282 AGAP9Q5VTM2 703 aa6.72□□□□□ -1.33
DHFR-204ENST00000508282 PNMA8AQ86V59 439 aaPredicted RBP6.72□□□□□ -1.33
DHFR-204ENST00000508282 LDLRAD3Q86YD5 345 aa6.72□□□□□ -1.33
DHFR-204ENST00000508282 PLXDC1Q8IUK5 500 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms