RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 GOLGA8NF8WBI6 632 aa11.46□□□□□ -0.58
PDLIM5-210ENST00000508216 GOLGA8RI6L899 631 aa11.46□□□□□ -0.58
PDLIM5-210ENST00000508216 IRS4O14654 1257 aaPredicted RBP11.46□□□□□ -0.58
PDLIM5-210ENST00000508216 BET1O15155 118 aa11.46□□□□□ -0.58
PDLIM5-210ENST00000508216 NCK2O43639 380 aa11.46□□□□□ -0.58
PDLIM5-210ENST00000508216 CCNT1O60563 726 aaKnown RBP11.46□□□□□ -0.58
PDLIM5-210ENST00000508216 IL10P22301 178 aa11.46□□□□□ -0.58
PDLIM5-210ENST00000508216 RRM1P23921 792 aa11.46□□□□□ -0.58
PDLIM5-210ENST00000508216 P2RX3P56373 397 aa11.46□□□□□ -0.58
PDLIM5-210ENST00000508216 SRP54P61011 504 aaKnown RBP11.46□□□□□ -0.58
PDLIM5-210ENST00000508216 CETN1Q12798 172 aa11.46□□□□□ -0.58
PDLIM5-210ENST00000508216 SMARCB1Q12824 385 aa11.46□□□□□ -0.58
PDLIM5-210ENST00000508216 CUL1Q13616 776 aa11.46□□□□□ -0.58
PDLIM5-210ENST00000508216 STK11Q15831 433 aa11.46□□□□□ -0.58
PDLIM5-210ENST00000508216 CCDC6Q16204 474 aa11.46□□□□□ -0.58
PDLIM5-210ENST00000508216 USP41Q3LFD5 358 aa11.46□□□□□ -0.58
PDLIM5-210ENST00000508216 KRT71Q3SY84 523 aa11.46□□□□□ -0.58
PDLIM5-210ENST00000508216 DSTYKQ6XUX3 929 aa11.46□□□□□ -0.58
PDLIM5-210ENST00000508216 CYP4V2Q6ZWL3 525 aaPredicted RBP11.46□□□□□ -0.58
PDLIM5-210ENST00000508216 LRRC34Q8IZ02 419 aa11.46□□□□□ -0.58
PDLIM5-210ENST00000508216 TERB1Q8NA31 727 aa11.46□□□□□ -0.58
PDLIM5-210ENST00000508216 PDZD8Q8NEN9 1154 aa11.46□□□□□ -0.58
PDLIM5-210ENST00000508216 OR10Z1Q8NGY1 313 aa11.46□□□□□ -0.58
PDLIM5-210ENST00000508216 NRG4Q8WWG1 115 aa11.46□□□□□ -0.58
PDLIM5-210ENST00000508216 TSR2Q969E8 191 aaKnown RBP11.46□□□□□ -0.58
PDLIM5-210ENST00000508216 CEP95Q96GE4 821 aa11.46□□□□□ -0.58
PDLIM5-210ENST00000508216 ZNF496Q96IT1 587 aaPredicted RBP11.46□□□□□ -0.58
PDLIM5-210ENST00000508216 DNAJC1Q96KC8 554 aaKnown RBP11.46□□□□□ -0.58
PDLIM5-210ENST00000508216 ZNF512BQ96KM6 892 aaPredicted RBP11.46□□□□□ -0.58
PDLIM5-210ENST00000508216 RPRD1AQ96P16 312 aaPredicted RBP11.46□□□□□ -0.58
PDLIM5-210ENST00000508216 LLPHQ9BRT6 129 aaKnown RBP11.46□□□□□ -0.58
PDLIM5-210ENST00000508216 OSBPL6Q9BZF3 934 aa11.46□□□□□ -0.58
PDLIM5-210ENST00000508216 PADI4Q9UM07 663 aa11.46□□□□□ -0.58
PDLIM5-210ENST00000508216 NEURL4Q96JN8 1562 aa11.46□□□□□ -0.58
PDLIM5-210ENST00000508216 KIF20BQ96Q89 1820 aa11.45□□□□□ -0.58
PDLIM5-210ENST00000508216 MYH8P13535 1937 aa11.45□□□□□ -0.58
PDLIM5-210ENST00000508216 XPO1O14980 1071 aaKnown RBP11.45□□□□□ -0.58
PDLIM5-210ENST00000508216 NDUFA2O43678 99 aa11.45□□□□□ -0.58
PDLIM5-210ENST00000508216 KRT86O43790 486 aa11.45□□□□□ -0.58
PDLIM5-210ENST00000508216 FGF18O76093 207 aa11.45□□□□□ -0.58
PDLIM5-210ENST00000508216 OR5F1O95221 314 aa11.45□□□□□ -0.58
PDLIM5-210ENST00000508216 ITGB3P05106 788 aa11.45□□□□□ -0.58
PDLIM5-210ENST00000508216 P4HA1P13674 534 aa11.45□□□□□ -0.58
PDLIM5-210ENST00000508216 PTPREP23469 700 aa11.45□□□□□ -0.58
PDLIM5-210ENST00000508216 PKLRP30613 574 aa11.45□□□□□ -0.58
PDLIM5-210ENST00000508216 ECE1P42892 770 aa11.45□□□□□ -0.58
PDLIM5-210ENST00000508216 NR2C2P49116 596 aa11.45□□□□□ -0.58
PDLIM5-210ENST00000508216 DSG1Q02413 1049 aa11.45□□□□□ -0.58
PDLIM5-210ENST00000508216 RRS1Q15050 365 aaKnown RBP11.45□□□□□ -0.58
PDLIM5-210ENST00000508216 MAPRE1Q15691 268 aaKnown RBP11.45□□□□□ -0.58
PDLIM5-210ENST00000508216 TMEM266Q2M3C6 531 aa11.45□□□□□ -0.58
PDLIM5-210ENST00000508216 FBXO43Q4G163 708 aa11.45□□□□□ -0.58
PDLIM5-210ENST00000508216 ANKRD39Q53RE8 183 aa11.45□□□□□ -0.58
PDLIM5-210ENST00000508216 METTL11BQ5VVY1 283 aa11.45□□□□□ -0.58
PDLIM5-210ENST00000508216 PPP4R4Q6NUP7 873 aa11.45□□□□□ -0.58
PDLIM5-210ENST00000508216 SH3BP5LQ7L8J4 393 aa11.45□□□□□ -0.58
PDLIM5-210ENST00000508216 ADGRG6Q86SQ4 1221 aa11.45□□□□□ -0.58
PDLIM5-210ENST00000508216 SCYL3Q8IZE3 742 aa11.45□□□□□ -0.58
PDLIM5-210ENST00000508216 CEP70Q8NHQ1 597 aa11.45□□□□□ -0.58
PDLIM5-210ENST00000508216 SCFD1Q8WVM8 642 aa11.45□□□□□ -0.58
PDLIM5-210ENST00000508216 PGM2Q96G03 612 aa11.45□□□□□ -0.58
PDLIM5-210ENST00000508216 CCDC138Q96M89 665 aa11.45□□□□□ -0.58
PDLIM5-210ENST00000508216 SECISBP2Q96T21 854 aaKnown RBP11.45□□□□□ -0.58
PDLIM5-210ENST00000508216 ELAC2Q9BQ52 826 aaKnown RBP11.45□□□□□ -0.58
PDLIM5-210ENST00000508216 UBN1Q9NPG3 1134 aa11.45□□□□□ -0.58
PDLIM5-210ENST00000508216 ZNF277Q9NRM2 450 aaPredicted RBP11.45□□□□□ -0.58
PDLIM5-210ENST00000508216 FARSBQ9NSD9 589 aaKnown RBP11.45□□□□□ -0.58
PDLIM5-210ENST00000508216 PPP1R14DQ9NXH3 145 aa11.45□□□□□ -0.58
PDLIM5-210ENST00000508216 TAS2R7Q9NYW3 318 aa11.45□□□□□ -0.58
PDLIM5-210ENST00000508216 CLIC5Q9NZA1 410 aa11.45□□□□□ -0.58
PDLIM5-210ENST00000508216 GNPTGQ9UJJ9 305 aa11.45□□□□□ -0.58
PDLIM5-210ENST00000508216 ANGPTL2Q9UKU9 493 aa11.45□□□□□ -0.58
PDLIM5-210ENST00000508216 RRP7AQ9Y3A4 280 aaKnown RBP11.45□□□□□ -0.58
PDLIM5-210ENST00000508216 MYH1P12882 1939 aa11.45□□□□□ -0.58
PDLIM5-210ENST00000508216 ARAP3Q8WWN8 1544 aa11.45□□□□□ -0.58
PDLIM5-210ENST00000508216 DUOX2Q9NRD8 1548 aa11.45□□□□□ -0.58
PDLIM5-210ENST00000508216 QRICH2Q9H0J4 1663 aa11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 ERVK-7P63135 1459 aa11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 MAGI1Q96QZ7 1491 aaPredicted RBP11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 MCF2LO15068 1137 aa11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 JRKO75564 520 aa11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 RHOBTB3O94955 611 aa11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 UBTFL6P0CB48 400 aaPredicted RBP11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 MYBP10242 640 aa11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 KRT2P35908 639 aa11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 PBX2P40425 430 aa11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 GRIA2P42262 883 aa11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 NUP107P57740 925 aa11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 RELQ04864 619 aaPredicted RBP11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 STK4Q13043 487 aa11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 NPTX1Q15818 432 aa11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 ZNF829Q3KNS6 432 aaPredicted RBP11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 PPP6R3Q5H9R7 873 aaPredicted RBP11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 LLGL2Q6P1M3 1020 aa11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 PPP1R21Q6ZMI0 780 aa11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 SPATA5Q8NB90 893 aa11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 MINDY2Q8NBR6 621 aa11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 BCL7CQ8WUZ0 217 aaPredicted RBP11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 REXO5Q96IC2 774 aaKnown RBP11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 CALN1Q9BXU9 219 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms