RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 GIT2Q14161 759 aa16.95■□□□□ 0.3
SCLT1-208ENST00000506368 PDK4Q16654 411 aa16.95■□□□□ 0.3
SCLT1-208ENST00000506368 TDRPQ86YL5 185 aa16.95■□□□□ 0.3
SCLT1-208ENST00000506368 AGPAT1Q99943 283 aa16.95■□□□□ 0.3
SCLT1-208ENST00000506368 SYT17Q9BSW7 474 aa16.95■□□□□ 0.3
SCLT1-208ENST00000506368 EURLQ9NYK6 297 aa16.95■□□□□ 0.3
SCLT1-208ENST00000506368 TJP3O95049 919 aa16.94■□□□□ 0.3
SCLT1-208ENST00000506368 PENKP01210 267 aaPredicted RBP16.94■□□□□ 0.3
SCLT1-208ENST00000506368 CREB1P16220 341 aa16.94■□□□□ 0.3
SCLT1-208ENST00000506368 CDR2Q01850 454 aa16.94■□□□□ 0.3
SCLT1-208ENST00000506368 SLC34A1Q06495 639 aa16.94■□□□□ 0.3
SCLT1-208ENST00000506368 SIX1Q15475 284 aaPredicted RBP16.94■□□□□ 0.3
SCLT1-208ENST00000506368 FYB2Q5VWT5 728 aa16.94■□□□□ 0.3
SCLT1-208ENST00000506368 NCSTNQ92542 709 aa16.94■□□□□ 0.3
SCLT1-208ENST00000506368 DYNLL2Q96FJ2 89 aa16.94■□□□□ 0.3
SCLT1-208ENST00000506368 GBP5Q96PP8 586 aa16.94■□□□□ 0.3
SCLT1-208ENST00000506368 OLFML3Q9NRN5 406 aa16.94■□□□□ 0.3
SCLT1-208ENST00000506368 CHCHD3Q9NX63 227 aaKnown RBP16.94■□□□□ 0.3
SCLT1-208ENST00000506368 MINPP1Q9UNW1 487 aa16.94■□□□□ 0.3
SCLT1-208ENST00000506368 NAALADL1Q9UQQ1 740 aa16.94■□□□□ 0.3
SCLT1-208ENST00000506368 ASTN1O14525 1302 aa16.94■□□□□ 0.3
SCLT1-208ENST00000506368 KLRG2A4D1S0 409 aaPredicted RBP16.93■□□□□ 0.3
SCLT1-208ENST00000506368 A8MXQ7 604 aa16.93■□□□□ 0.3
SCLT1-208ENST00000506368 CREB3O43889 395 aa16.93■□□□□ 0.3
SCLT1-208ENST00000506368 GH1P01241 217 aa16.93■□□□□ 0.3
SCLT1-208ENST00000506368 T-ENOLP0DO92 83 aa16.93■□□□□ 0.3
SCLT1-208ENST00000506368 GZMAP12544 262 aa16.93■□□□□ 0.3
SCLT1-208ENST00000506368 TNNI2P48788 182 aa16.93■□□□□ 0.3
SCLT1-208ENST00000506368 FMO5P49326 533 aa16.93■□□□□ 0.3
SCLT1-208ENST00000506368 AP1B1Q10567 949 aa16.93■□□□□ 0.3
SCLT1-208ENST00000506368 CTTNQ14247 550 aaKnown RBP16.93■□□□□ 0.3
SCLT1-208ENST00000506368 RCN2Q14257 317 aa16.93■□□□□ 0.3
SCLT1-208ENST00000506368 RASA2Q15283 850 aa16.93■□□□□ 0.3
SCLT1-208ENST00000506368 CRY2Q49AN0 593 aa16.93■□□□□ 0.3
SCLT1-208ENST00000506368 ZC3H12AQ5D1E8 599 aaKnown RBP16.93■□□□□ 0.3
SCLT1-208ENST00000506368 ARSHQ5FYA8 562 aa16.93■□□□□ 0.3
SCLT1-208ENST00000506368 SNX30Q5VWJ9 437 aa16.93■□□□□ 0.3
SCLT1-208ENST00000506368 RNF207Q6ZRF8 634 aa16.93■□□□□ 0.3
SCLT1-208ENST00000506368 ATL2Q8NHH9 583 aa16.93■□□□□ 0.3
SCLT1-208ENST00000506368 GATA6Q92908 595 aa16.93■□□□□ 0.3
SCLT1-208ENST00000506368 EYA3Q99504 573 aa16.93■□□□□ 0.3
SCLT1-208ENST00000506368 ANKRD2Q9GZV1 360 aa16.93■□□□□ 0.3
SCLT1-208ENST00000506368 FSCN2O14926 492 aa16.93■□□□□ 0.3
SCLT1-208ENST00000506368 EPHB2P29323 1055 aa16.93■□□□□ 0.3
SCLT1-208ENST00000506368 FOXN2P32314 431 aa16.93■□□□□ 0.3
SCLT1-208ENST00000506368 KRT17Q04695 432 aa16.93■□□□□ 0.3
SCLT1-208ENST00000506368 UBAP2Q5T6F2 1119 aaKnown RBP16.93■□□□□ 0.3
SCLT1-208ENST00000506368 DAB2IPQ5VWQ8 1189 aa16.93■□□□□ 0.3
SCLT1-208ENST00000506368 USP17L2Q6R6M4 530 aa16.93■□□□□ 0.3
SCLT1-208ENST00000506368 C16orf86Q6ZW13 317 aa16.93■□□□□ 0.3
SCLT1-208ENST00000506368 FAM186BQ8IYM0 893 aa16.93■□□□□ 0.3
SCLT1-208ENST00000506368 ARHGAP24Q8N264 748 aa16.93■□□□□ 0.3
SCLT1-208ENST00000506368 C10orf82Q8WW14 230 aa16.93■□□□□ 0.3
SCLT1-208ENST00000506368 SYNCQ9H7C4 482 aa16.93■□□□□ 0.3
SCLT1-208ENST00000506368 SSU72Q9NP77 194 aaKnown RBP16.93■□□□□ 0.3
SCLT1-208ENST00000506368 STX18Q9P2W9 335 aaKnown RBP16.93■□□□□ 0.3
SCLT1-208ENST00000506368 ZFP69BQ9UJL9 534 aa16.93■□□□□ 0.3
SCLT1-208ENST00000506368 DNM3Q9UQ16 869 aa16.93■□□□□ 0.3
SCLT1-208ENST00000506368 A0A1W2PRG0 241 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 RASA4BC9J798 803 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 H0YIN7 160 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 TBX3O15119 743 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 RASA4O43374 803 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 LDHCP07864 332 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 COMTP21964 271 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 CACNA2D1P54289 1103 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 POLE2P56282 527 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 SLX4Q8IY92 1834 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 SRRM1Q8IYB3 904 aaKnown RBP16.92■□□□□ 0.3
SCLT1-208ENST00000506368 ZDHHC14Q8IZN3 488 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 SLC17A8Q8NDX2 589 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 SNED1Q8TER0 1413 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 LZICQ8WZA0 190 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 KRT35Q92764 455 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 AZIN2Q96A70 460 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 GPR88Q9GZN0 384 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 ZHX3Q9H4I2 956 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 DNAJC18Q9H819 358 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 DDX43Q9NXZ2 648 aaKnown RBP16.92■□□□□ 0.3
SCLT1-208ENST00000506368 NINJ2Q9NZG7 142 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 ASIC3Q9UHC3 531 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 BRCA1P38398 1863 aaKnown RBP16.92■□□□□ 0.3
SCLT1-208ENST00000506368 CYP3A7-CYP3A51PA0A087WV96 503 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 PNMA6FA0A0J9YX94 578 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 POTEB3A0JP26 581 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 POTECB2RU33 542 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 ANKRD63C9JTQ0 380 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 NDC80O14777 642 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 MAP3K7O43318 606 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 ATP9AO75110 1047 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 CYP3A7P24462 503 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 PRDX5P30044 214 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 HOXD13P35453 343 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 RNF220Q5VTB9 566 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 POTEBQ6S5H4 581 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 LRRC74BQ6ZQY2 392 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 MAEAQ7L5Y9 396 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 SFR1Q86XK3 245 aa16.92■□□□□ 0.3
SCLT1-208ENST00000506368 DHX37Q8IY37 1157 aaKnown RBP16.92■□□□□ 0.3
SCLT1-208ENST00000506368 KLHL23Q8NBE8 558 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms